{ "type": "genome", "identifier": "GCA_018648445.1", "organism": "Rhodospirillales bacterium", "title": "Rhodospirillales bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "The University of Melbourne", "publication": [ {} ], "properties": { "assembly_accession": "GCA_018648445.1", "bioproject": "PRJNA630981", "biosample": "SAMN14913734", "wgs_master": "JABGRG000000000.1", "refseq_category": "na", "taxid": "2026786", "species_taxid": "2026786", "organism_name": "Rhodospirillales bacterium", "infraspecific_name": "", "isolate": "co234_bin74", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/06/02", "asm_name": "ASM1864844v1", "submitter": "The University of Melbourne", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/648/445/GCA_018648445.1_ASM1864844v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-06-02", "dateModified": "2021-06-02", "datePublished": "2021-06-02", "_annotation": { "sample_count": 1, "sample_organism": [ "Rhodospirillales bacterium" ], "sample_taxid": [ "2026786" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Canada: Vancouver, Saanich Inlet" ], "sample_host_location_id": [], "data_size": "1.223 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 8.33, "strain_heterogeneity": 66.67, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "4282342", "Number of Sequences": "249", "Longest Sequences (bp)": "100652", "N50 (bp)": "33468", "Gap Ratio (%)": "0.015038", "GCcontent (%)": "58.2", "Number of CDSs": "3870", "Average Protein Length": "314.7", "Coding Ratio (%)": "85.3", "Number of rRNAs": "0", "Number of tRNAs": "37", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Magnetospirillum kuznetsovii", "strain": "strain=LBB-42", "accession": "GCA_003284725.1", "taxid": 2053833, "species_taxid": 2053833, "relation_to_type": "type", "validated": true, "ani": 76.4243, "matched_fragments": 87, "total_fragments": 1297, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Caenispirillum salinarum", "strain": "strain=AK4", "accession": "GCA_000315795.1", "taxid": 859058, "species_taxid": 859058, "relation_to_type": "type", "validated": true, "ani": 76.3746, "matched_fragments": 91, "total_fragments": 1297, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Azospirillum halopraeferens", "strain": "strain=DSM 3675", "accession": "GCA_000429625.1", "taxid": 34010, "species_taxid": 34010, "relation_to_type": "type", "validated": true, "ani": 76.0436, "matched_fragments": 92, "total_fragments": 1297, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Magnetospirillum marisnigri", "strain": "strain=SP-1", "accession": "GCA_001650715.1", "taxid": 1285242, "species_taxid": 1285242, "relation_to_type": "type", "validated": true, "ani": 76.016, "matched_fragments": 90, "total_fragments": 1297, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Varunaivibrio sulfuroxidans", "strain": "strain=DSM 101688", "accession": "GCA_004341725.1", "taxid": 1773489, "species_taxid": 1773489, "relation_to_type": "type", "validated": true, "ani": 75.9731, "matched_fragments": 59, "total_fragments": 1297, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oceanibaculum indicum", "strain": "strain=P24", "accession": 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