# locus_id locus_tag location classification internal_stop indel ref_id description query_cov ref_cov identity MGA_33 LOCUS_00330 sequence01:35363..35494(+) internal_stop_codon 35528..35530(+),35564..35566(+),35531..35533(+),35306..35308(+),35558..35560(+),35492..35494(+),35543..35545(+),35495..35497(+) WP_004454751.1 molecular chaperone DnaJ 95.3 10.7 70.7 MGA_42 LOCUS_00420 sequence01:40017..40325(+) internal_stop_codon 40398..40400(+),40332..40334(+),40356..40358(+),40323..40325(+),40395..40397(+) WP_009874359.1 23S rRNA pseudouridine(1911/1915/1917) synthase RluD 86.3 28.5 36.0 MGA_53 LOCUS_00530 sequence01:55660..55944(+) internal_stop_codon 55942..55944(+),56149..56151(+),56131..56133(+),55972..55974(+) WP_164925365.1 translation elongation factor 4 97.9 16.0 69.1 MGA_54 LOCUS_00540 sequence01:56005..56133(+) internal_stop_codon 56281..56283(+),55942..55944(+),56326..56328(+),56149..56151(+),56131..56133(+),55972..55974(+) WP_007053360.1 translation elongation factor 4 100.0 6.7 64.3 MGA_58 LOCUS_00580 sequence01:61048..61389(+) internal_stop_codon 60922..60924(+),60979..60981(+),61045..61047(+) WP_010965152.1 bifunctional 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/30S ribosomal protein S1 96.5 17.3 43.2 MGA_59 LOCUS_00590 sequence01:61638..62087(+) internal_stop_codon 62085..62087(+) WP_005645552.1 30S ribosomal protein S2 88.6 55.0 38.6 MGA_60 LOCUS_00600 sequence01:62097..62306(+) internal_stop_codon 62085..62087(+) WP_003565810.1 30S ribosomal protein S2 92.8 24.4 42.2 MGA_63 LOCUS_00630 sequence01:63019..63198(+) internal_stop_codon 63196..63198(+),63490..63492(+) WP_003231929.1 translation elongation factor Ts 100.0 20.1 79.7 MGA_65 LOCUS_00650 sequence01:63523..63804(+) internal_stop_codon 63490..63492(+) WP_005765978.1 translation elongation factor Ts 81.7 25.8 46.1 MGA_68 LOCUS_00680 sequence01:67599..67790(+) internal_stop_codon 67551..67553(+),67338..67340(+),67344..67346(+),67488..67490(+),67500..67502(+),67434..67436(+) WP_003020254.1 arginine--tRNA ligase 98.4 10.7 40.3 MGA_72 LOCUS_00720 sequence01:72001..72357(+) internal_stop_codon 71806..71808(+),72451..72453(+),71926..71928(+),72355..72357(+),72433..72435(+),71767..71769(+) WP_011963811.1 DEAD/DEAH box helicase 100.0 28.5 36.4 MGA_79 LOCUS_00780 sequence02:5727..6029(+) internal_stop_codon 5706..5708(+),6027..6029(+),5697..5699(+),6072..6074(+),6171..6173(+),5673..5675(+),6231..6233(+),6273..6275(+) WP_003357634.1 excinuclease ABC subunit UvrB 100.0 15.1 75.0 MGA_82 LOCUS_00810 sequence02:6930..7133(+) internal_stop_codon 6840..6842(+),7227..7229(+),7266..7268(+),7152..7154(+),7131..7133(+),6897..6899(+),7290..7292(+),6639..6641(+) WP_003722621.1 excinuclease ABC subunit UvrB 70.1 7.1 66.0 MGA_88 LOCUS_00870 sequence02:13829..14035(-) internal_stop_codon 14141..14143(-),14120..14122(-),13829..13831(-),13541..13543(-),14246..14248(-),14300..14302(-),14234..14236(-),13571..13573(-),14279..14281(-),14036..14038(-),13661..13663(-),14216..14218(-),13781..13783(-),14078..14080(-) WP_002219492.1 DNA (cytosine-5-)-methyltransferase 100.0 16.8 68.1 MGA_110 LOCUS_01090 sequence02:37509..37721(-) internal_stop_codon 37797..37799(-),37338..37340(-),37350..37352(-),37449..37451(-),37842..37844(-),37815..37817(-),37383..37385(-),37752..37754(-),37263..37265(-),37509..37511(-),37419..37421(-) WP_001830175.1 excinuclease ABC subunit UvrC 85.7 10.3 59.0 MGA_119 LOCUS_01180 sequence02:45670..45948(+) internal_stop_codon 45946..45948(+),45406..45408(+),45550..45552(+),45655..45657(+),45421..45423(+),45445..45447(+) WP_011020681.1 queuosine precursor transporter 100.0 40.5 50.0 MGA_139 LOCUS_01380 sequence03:13493..13636(+) internal_stop_codon 13799..13801(+),13289..13291(+),13649..13651(+),13823..13825(+),13688..13690(+),13253..13255(+),13394..13396(+),13634..13636(+) WP_002992788.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN 100.0 13.1 51.1 MGA_156 LOCUS_01550 sequence03:31998..32228(-) internal_stop_codon 32394..32396(-),32283..32285(-),32397..32399(-),31998..32000(-),32328..32330(-),32409..32411(-),32262..32264(-),31893..31895(-),32418..32420(-),32430..32432(-) WP_011404069.1 ATP-dependent Clp protease ATP-binding subunit 100.0 8.2 42.1 MGA_161 LOCUS_01600 sequence03:35179..35307(-) internal_stop_codon 35320..35322(-),35398..35400(-),35179..35181(-) WP_003131651.1 alkyl hydroperoxide reductase subunit C 100.0 22.5 52.4 MGA_166 LOCUS_01650 sequence03:41020..41343(+) internal_stop_codon 41404..41406(+),40738..40740(+),41497..41499(+),40747..40749(+),40897..40899(+),41341..41343(+),41002..41004(+) WP_011023086.1 MoxR family ATPase 97.2 32.1 41.3 MGA_175 LOCUS_01740 sequence03:48619..48798(-) internal_stop_codon 49021..49023(-),48328..48330(-),48619..48621(-),48847..48849(-),48925..48927(-) WP_012258550.1 isoleucine--tRNA ligase 98.3 5.4 58.6 MGA_176 LOCUS_01750 sequence03:49021..49203(-) internal_stop_codon 49021..49023(-),49405..49407(-),49255..49257(-),49228..49230(-),48847..48849(-),49273..49275(-),48925..48927(-) WP_010724987.1 isoleucine--tRNA ligase 96.7 5.6 67.2 MGA_178 LOCUS_01770 sequence03:50377..50589(-) internal_stop_codon 50260..50262(-),50302..50304(-),50602..50604(-),50683..50685(-),50161..50163(-),50791..50793(-),50767..50769(-),50314..50316(-),50641..50643(-),50377..50379(-),50752..50754(-) WP_010966319.1 isoleucine--tRNA ligase 100.0 6.8 57.1 MGA_179 LOCUS_01780 sequence03:50791..51024(-) internal_stop_codon 50602..50604(-),50683..50685(-),50767..50769(-),50641..50643(-),50791..50793(-),50752..50754(-) WP_010889833.1 isoleucine--tRNA ligase 96.1 7.1 67.6 MGA_181 LOCUS_01790 sequence04:323..649(-) internal_stop_codon 323..325(-),197..199(-),299..301(-) WP_002678895.1 50S ribosomal protein L25 97.2 50.7 30.8 MGA_185 LOCUS_01830 sequence04:9693..9836(+) internal_stop_codon 9948..9950(+),10020..10022(+),9960..9962(+),10005..10007(+),10035..10037(+),9834..9836(+),10026..10028(+),9852..9854(+) WP_011183137.1 methionine adenosyltransferase 100.0 12.5 76.6 MGA_186 LOCUS_01840 sequence04:10041..10280(+) internal_stop_codon 10035..10037(+),10026..10028(+),10311..10313(+),10392..10394(+),10452..10454(+),9948..9950(+),10020..10022(+),9960..9962(+),10005..10007(+),10431..10433(+),10371..10373(+),10278..10280(+),9834..9836(+),10464..10466(+),10569..10571(+),10446..10448(+),9852..9854(+) WP_000933820.1 methionine adenosyltransferase 100.0 20.1 61.2 MGA_187 LOCUS_01850 sequence04:11071..11277(+) internal_stop_codon 11308..11310(+),11275..11277(+) WP_011022624.1 LemA family protein 85.3 31.9 53.4 MGA_188 LOCUS_01860 sequence04:11317..11634(+) internal_stop_codon 11308..11310(+),11275..11277(+) WP_003704892.1 LemA family protein 87.6 49.7 46.7 MGA_196 LOCUS_01940 sequence04:16057..16371(+) internal_stop_codon 15937..15939(+),16036..16038(+),15934..15936(+) WP_011262624.1 type II secretion system F family protein 86.5 21.8 35.6 MGA_209 LOCUS_02070 sequence04:27162..27413(-) internal_stop_codon 27045..27047(-),27162..27164(-) WP_008764014.1 ribosome recycling factor 98.8 44.1 39.0 MGA_237 LOCUS_02330 sequence05:9256..9483(+) internal_stop_codon 9217..9219(+) WP_012258099.1 zinc ribbon domain-containing protein 97.3 37.6 37.0 MGA_248 LOCUS_02440 sequence05:16584..16736(+) internal_stop_codon 16569..16571(+),16383..16385(+) WP_002670034.1 30S ribosomal protein S13 98.0 40.5 77.6 MGA_249 LOCUS_02450 sequence05:16790..16933(+) internal_stop_codon 16931..16933(+),17066..17068(+) WP_003486671.1 30S ribosomal protein S11 97.9 36.2 59.6 MGA_253 LOCUS_02490 sequence05:18909..19235(+) partial WP_010966384.1 50S ribosomal protein L17 75.9 70.2 37.8 MGA_254 LOCUS_02500 sequence05:19297..19497(+) internal_stop_codon 19678..19680(+),19495..19497(+) WP_011125835.1 50S ribosomal protein L13 98.5 42.7 56.9 MGA_255 LOCUS_02510 sequence05:19504..19680(+) internal_stop_codon 19678..19680(+),19495..19497(+) WP_003421107.1 50S ribosomal protein L13 94.8 39.2 60.7 MGA_257 LOCUS_02530 sequence05:20379..20537(+) internal_stop_codon 20559..20561(+),20535..20537(+),20355..20357(+) WP_008362393.1 30S ribosomal protein S12 100.0 37.4 92.3 MGA_258 LOCUS_02540 sequence05:20724..20927(+) internal_stop_codon 21048..21050(+),20925..20927(+) WP_011393941.1 30S ribosomal protein S7 83.6 35.9 50.0 MGA_261 LOCUS_02570 sequence05:23217..23381(+) internal_stop_codon 23391..23393(+),23496..23498(+),23379..23381(+) WP_010963336.1 DNA gyrase subunit A 100.0 6.5 70.4 MGA_262 LOCUS_02580 sequence05:23502..23678(+) internal_stop_codon 23907..23909(+),23391..23393(+),23496..23498(+),23676..23678(+),23838..23840(+),23937..23939(+),23379..23381(+) WP_014537740.1 DNA gyrase subunit A 100.0 6.4 63.8 MGA_263 LOCUS_02590 sequence05:23682..23840(+) internal_stop_codon 23907..23909(+),23496..23498(+),23676..23678(+),23838..23840(+),23937..23939(+),24036..24038(+) WP_004080399.1 DNA gyrase subunit A 98.1 6.0 66.7 MGA_264 LOCUS_02600 sequence05:24459..24659(+) internal_stop_codon 24657..24659(+),24777..24779(+),24186..24188(+),24789..24791(+),24924..24926(+) WP_032910418.1 DNA gyrase subunit A 100.0 8.1 50.0 MGA_269 LOCUS_02650 sequence05:30483..30767(+) internal_stop_codon 30765..30767(+),30999..31001(+),30924..30926(+) WP_002679355.1 alanine--tRNA ligase 98.9 15.5 73.1 MGA_270 LOCUS_02660 sequence05:31086..31211(+) internal_stop_codon 31209..31211(+),31275..31277(+),31449..31451(+),31494..31496(+),30999..31001(+),31035..31037(+),31359..31361(+),31053..31055(+),30924..30926(+) WP_011964045.1 alanine--tRNA ligase 97.6 4.5 72.5 MGA_310 LOCUS_03040 sequence07:2805..2942(+) internal_stop_codon 2562..2564(+),2961..2963(+),2727..2729(+),2625..2627(+),3159..3161(+),2532..2534(+),3000..3002(+),3051..3053(+),2598..2600(+),3210..3212(+),2547..2549(+),2940..2942(+),3135..3137(+),3126..3128(+) WP_011228224.1 DNA translocase FtsK 100.0 5.2 64.4 MGA_313 LOCUS_03070 sequence07:6258..6476(-) internal_stop_codon 6492..6494(-),6075..6077(-),6234..6236(-),6258..6260(-),6582..6584(-),6186..6188(-),6726..6728(-) WP_011262453.1 tRNA 5-hydroxyuridine modification protein YegQ 100.0 15.6 62.5 MGA_314 LOCUS_03080 sequence07:6582..6713(-) internal_stop_codon 6582..6584(-),6492..6494(-),6726..6728(-) WP_011460317.1 U32 family peptidase 95.3 9.5 56.1 MGA_327 LOCUS_03210 sequence07:20072..20233(+) internal_stop_codon 20276..20278(+),20231..20233(+),20411..20413(+),20315..20317(+) WP_120701253.1 ATP-dependent DNA helicase 90.6 3.6 52.1 MGA_331 LOCUS_03250 sequence07:25092..25247(-) internal_stop_codon 25092..25094(-),25335..25337(-),25275..25277(-),25077..25079(-) WP_008761063.1 thymidylate synthase 100.0 18.2 54.9 MGA_343 LOCUS_03360 sequence08:7341..7511(+) internal_stop_codon 7251..7253(+),7317..7319(+),7692..7694(+),7590..7592(+),7509..7511(+) WP_003438316.1 polyribonucleotide nucleotidyltransferase 82.1 6.5 69.6 MGA_367 LOCUS_03600 sequence09:1562..1813(-) internal_stop_codon 1859..1861(-),1910..1912(-),1964..1966(-),1838..1840(-) WP_011727689.1 50S ribosomal protein L15 100.0 54.4 42.2 MGA_369 LOCUS_03620 sequence09:3687..3953(-) internal_stop_codon 3687..3689(-),3612..3614(-) WP_005904135.1 30S ribosomal protein S8 97.7 65.2 40.7 MGA_375 LOCUS_03680 sequence09:8857..9066(-) partial WP_012583347.1 50S ribosomal protein L23 85.5 61.1 49.2 MGA_376 LOCUS_03690 sequence09:9090..9413(-) internal_stop_codon 9552..9554(-),9456..9458(-),9672..9674(-),9642..9644(-) WP_012869927.1 50S ribosomal protein L4 98.1 50.5 29.5 MGA_386 LOCUS_03790 sequence09:21634..21885(+) internal_stop_codon 22102..22104(+),21937..21939(+),21883..21885(+),21964..21966(+) WP_003357512.1 elongation factor G 97.6 11.8 86.4 MGA_387 LOCUS_03800 sequence09:22177..22800(+) internal_stop_codon 21883..21885(+),21964..21966(+),22102..22104(+),21937..21939(+),22798..22800(+) WP_002294317.1 elongation factor G 100.0 29.4 50.5 MGA_388 LOCUS_03810 sequence09:22909..23148(+) internal_stop_codon 22798..22800(+),23146..23148(+) WP_004197486.1 elongation factor G 100.0 11.2 72.2 MGA_389 LOCUS_03820 sequence09:23200..23778(+) internal_stop_codon 23146..23148(+) WP_011393940.1 elongation factor G 87.5 24.3 63.1 MGA_397 LOCUS_03890 sequence10:1795..2274(+) internal_stop_codon 2488..2490(+),2281..2283(+),2272..2274(+),2326..2328(+),1654..1656(+),2347..2349(+),1792..1794(+),2404..2406(+),2293..2295(+),2335..2337(+),2416..2418(+),2311..2313(+) WP_010966551.1 ribonucleoside-diphosphate reductase subunit alpha 93.1 20.5 47.4 MGA_398 LOCUS_03900 sequence10:2758..3099(+) internal_stop_codon 2488..2490(+),2755..2757(+),3112..3114(+),2638..2640(+),3295..3297(+),3283..3285(+),3103..3105(+),3097..3099(+),3244..3246(+) WP_010880000.1 ribonucleoside-diphosphate reductase subunit alpha 99.1 14.2 52.6 MGA_401 LOCUS_03930 sequence10:6975..7115(+) internal_stop_codon 6831..6833(+),7113..7115(+),6969..6971(+),7203..7205(+),7317..7319(+),7176..7178(+),7329..7331(+) WP_004192163.1 ribonucleoside triphosphate reductase 100.0 7.9 80.4 MGA_402 LOCUS_03940 sequence10:10235..10462(+) internal_stop_codon 10514..10516(+),10463..10465(+),10220..10222(+),10124..10126(+),10523..10525(+),10049..10051(+),10460..10462(+) WP_005897713.1 ribonucleotide-diphosphate reductase subunit beta 100.0 21.8 62.7 MGA_403 LOCUS_03950 sequence10:10598..10783(+) internal_stop_codon 10463..10465(+),10460..10462(+),10523..10525(+),10796..10798(+),10781..10783(+),10514..10516(+) WP_002851758.1 ribonucleotide-diphosphate reductase subunit beta 98.4 18.5 38.1 MGA_404 LOCUS_03960 sequence10:10799..10999(+) internal_stop_codon 10523..10525(+),10796..10798(+),10781..10783(+),10514..10516(+) WP_005897713.1 ribonucleotide-diphosphate reductase subunit beta 95.5 19.2 51.5 MGA_410 LOCUS_04020 sequence10:20992..21225(+) internal_stop_codon 21343..21345(+),21223..21225(+),21325..21327(+),21493..21495(+),20977..20979(+) WP_004188255.1 glycosyltransferase 100.0 9.4 39.0 MGA_411 LOCUS_04030 sequence10:21355..21495(+) internal_stop_codon 21343..21345(+),21223..21225(+),21325..21327(+),21493..21495(+),21553..21555(+) WP_012583291.1 glycosyltransferase family 4 protein 93.5 11.8 58.1 MGA_417 LOCUS_04090 sequence10:27874..28062(-) internal_stop_codon 27643..27645(-),27757..27759(-),27637..27639(-),27589..27591(-),27850..27852(-),27814..27816(-),27670..27672(-),27838..27840(-),27736..27738(-),27856..27858(-),27874..27876(-),27709..27711(-) WP_003977484.1 uracil-DNA glycosylase 91.9 24.7 38.6 MGA_419 LOCUS_04110 sequence10:28982..29206(+) internal_stop_codon 28874..28876(+),29204..29206(+),28754..28756(+),28763..28765(+) WP_032826366.1 oligopeptidase A 90.5 10.4 40.8 MGA_431 LOCUS_04220 sequence11:10519..10776(+) internal_stop_codon 10774..10776(+),10318..10320(+),10450..10452(+),10867..10869(+),10378..10380(+),10276..10278(+),10930..10932(+) WP_011070610.1 DNA-directed RNA polymerase subunit beta 74.1 4.7 46.0 MGA_432 LOCUS_04230 sequence11:10972..11163(+) internal_stop_codon 10774..10776(+),11161..11163(+),11269..11271(+),10867..10869(+),11170..11172(+),10930..10932(+) WP_011125790.1 DNA-directed RNA polymerase subunit beta 100.0 5.7 65.1 MGA_433 LOCUS_04240 sequence11:12112..12306(+) internal_stop_codon 12319..12321(+),11884..11886(+),12304..12306(+),12472..12474(+),11935..11937(+),12334..12336(+),12586..12588(+),12073..12075(+),12352..12354(+),11851..11853(+),11896..11898(+),12532..12534(+),11845..11847(+),12088..12090(+) WP_011393945.1 DNA-directed RNA polymerase subunit beta 96.9 5.4 71.0 MGA_434 LOCUS_04250 sequence11:13054..13239(+) internal_stop_codon 12844..12846(+),12889..12891(+),13048..13050(+),12772..12774(+),12919..12921(+),13015..13017(+),13237..13239(+),13033..13035(+),12982..12984(+) WP_002936570.1 DNA-directed RNA polymerase subunit beta 100.0 5.1 72.1 MGA_436 LOCUS_04270 sequence11:13786..14166(+) internal_stop_codon 14227..14229(+),13699..13701(+),14176..14178(+),14164..14166(+),13642..13644(+),13747..13749(+),14236..14238(+) WP_012256762.1 DNA-directed RNA polymerase subunit beta' 98.4 8.6 33.3 MGA_437 LOCUS_04280 sequence11:14584..15186(+) internal_stop_codon 15358..15360(+),15256..15258(+),15184..15186(+),15262..15264(+),14464..14466(+),14548..14550(+),15325..15327(+) WP_011056488.1 DNA-directed RNA polymerase subunit gamma 100.0 31.8 63.5 MGA_444 LOCUS_04350 sequence11:22292..22414(+) internal_stop_codon 22211..22213(+),22412..22414(+),22031..22033(+),22160..22162(+),22256..22258(+),22238..22240(+),22577..22579(+),22697..22699(+),22100..22102(+),22115..22117(+),22058..22060(+),22214..22216(+) WP_011105016.1 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB 95.0 7.9 65.8 MGA_454 LOCUS_04450 sequence11:28698..29015(+) internal_stop_codon 29172..29174(+),28632..28634(+),29088..29090(+),29124..29126(+),28461..28463(+),29013..29015(+),28683..28685(+),28665..28667(+),28443..28445(+),29244..29246(+),28605..28607(+) WP_004080997.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase 80.0 11.8 53.6 MGA_478 LOCUS_04670 sequence13:1799..2287(+) internal_stop_codon 1598..1600(+),1745..1747(+),2285..2287(+),1583..1585(+),2507..2509(+) WP_002858322.1 invasion protein CiaB 96.9 25.6 31.4 MGA_499 LOCUS_04880 sequence14:1383..1550(+) internal_stop_codon 1323..1325(+) WP_010939490.1 RNA-binding protein 98.2 59.6 59.3 MGA_508 LOCUS_04970 sequence14:9038..9274(-) internal_stop_codon 8885..8887(-),9038..9040(-) WP_005811460.1 NYN domain-containing protein 89.7 27.7 58.6 MGA_526 LOCUS_05150 sequence15:2014..2181(-) internal_stop_codon 2407..2409(-),2305..2307(-),2203..2205(-),2215..2217(-),2188..2190(-),2338..2340(-) WP_011228994.1 glutamine--fructose-6-phosphate transaminase (isomerizing) 89.1 8.1 55.1 MGA_559 LOCUS_05470 sequence16:11185..11358(-) internal_stop_codon 11146..11148(-),11125..11127(-),11185..11187(-),11059..11061(-) WP_010943738.1 single-stranded DNA-binding protein 96.5 37.7 45.5 MGA_574 LOCUS_05620 sequence17:3436..3564(-) internal_stop_codon 3211..3213(-),3175..3177(-),3232..3234(-),3142..3144(-),3436..3438(-),3349..3351(-) WP_011962679.1 NAD(P)H-dependent oxidoreductase 100.0 20.0 61.9 MGA_585 LOCUS_05730 sequence17:13092..13262(+) internal_stop_codon 13467..13469(+),12819..12821(+),12996..12998(+),13416..13418(+),12957..12959(+),13038..13040(+),13284..13286(+),12948..12950(+),12912..12914(+),13425..13427(+),13260..13262(+) WP_005816337.1 RNA polymerase sigma factor RpoD 100.0 14.3 48.2 MGA_602 LOCUS_05900 sequence19:1201..1470(+) internal_stop_codon 1690..1692(+),1723..1725(+),1741..1743(+),1675..1677(+),1615..1617(+),1468..1470(+),1687..1689(+) WP_011016472.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD 98.9 26.1 55.1 MGA_605 LOCUS_05930 sequence19:3730..3879(+) internal_stop_codon 3439..3441(+),3571..3573(+),3604..3606(+),3676..3678(+),3997..3999(+),3877..3879(+),4090..4092(+),4042..4044(+),4039..4041(+),3589..3591(+),3703..3705(+),3520..3522(+),3679..3681(+) WP_011962338.1 tyrosine--tRNA ligase 95.9 10.9 46.8 MGA_614 LOCUS_06020 sequence19:14368..14517(-) internal_stop_codon 14656..14658(-),14542..14544(-),14806..14808(-),14641..14643(-),14155..14157(-),14566..14568(-),14368..14370(-),14569..14571(-),14203..14205(-),14248..14250(-),14674..14676(-),14206..14208(-),14725..14727(-) WP_011962338.1 tyrosine--tRNA ligase 95.9 10.9 46.8 MGA_617 LOCUS_06050 sequence19:16777..17046(-) internal_stop_codon 16777..16779(-),16555..16557(-),16558..16560(-),16522..16524(-),16504..16506(-),16630..16632(-),16570..16572(-) WP_011016472.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD 98.9 26.1 55.1 MGA_624 LOCUS_06110 sequence20:6240..6443(+) internal_stop_codon 6633..6635(+),6657..6659(+),6678..6680(+),6024..6026(+),6441..6443(+),6189..6191(+),6174..6176(+),6582..6584(+),6474..6476(+) WP_010871000.1 pyridoxal phosphate-dependent aminotransferase 92.5 14.4 46.8 MGA_641 LOCUS_06280 sequence21:7923..8183(+) internal_stop_codon 8244..8246(+),8193..8195(+),8268..8270(+),8397..8399(+),7911..7913(+),8181..8183(+),7761..7763(+),8259..8261(+),7707..7709(+),8364..8366(+) WP_002680258.1 leucine--tRNA ligase 100.0 10.5 48.9 MGA_643 LOCUS_06300 sequence21:9495..9701(+) internal_stop_codon 9924..9926(+),9699..9701(+),9333..9335(+),9414..9416(+),9453..9455(+),9891..9893(+),9804..9806(+) WP_001199945.1 leucine--tRNA ligase 98.5 7.6 58.2 MGA_646 LOCUS_06330 sequence21:13216..13401(-) internal_stop_codon 13210..13212(-),13066..13068(-),12982..12984(-),13216..13218(-),13159..13161(-),13435..13437(-),13204..13206(-),13480..13482(-) WP_011072404.1 Holliday junction branch migration DNA helicase RuvB 100.0 18.3 67.2 MGA_667 LOCUS_06530 sequence23:3323..3445(+) internal_stop_codon 3443..3445(+),3206..3208(+),3254..3256(+),3239..3241(+),3548..3550(+) WP_002681769.1 virulence RhuM family protein 97.5 11.4 59.0 MGA_699 LOCUS_06840 sequence25:1350..1496(-) internal_stop_codon 1518..1520(-),1737..1739(-),1707..1709(-),1332..1334(-),1350..1352(-),1182..1184(-),1116..1118(-),1281..1283(-),1548..1550(-),1581..1583(-),1230..1232(-) WP_011166217.1 DNA topoisomerase (ATP-hydrolyzing) subunit B 97.9 7.6 54.2 MGA_700 LOCUS_06850 sequence25:3481..3615(-) internal_stop_codon 3325..3327(-),3703..3705(-),3448..3450(-),3631..3633(-),3406..3408(-),3361..3363(-),3295..3297(-),3481..3483(-),3331..3333(-),3472..3474(-) WP_124796873.1 peptide chain release factor 1 97.7 12.0 65.1 MGA_707 LOCUS_06920 sequence25:7629..7901(+) partial WP_012869403.1 single-stranded DNA-binding protein 95.6 53.4 47.7 MGA_708 LOCUS_06930 sequence25:8098..8316(+) partial WP_003549366.1 30S ribosomal protein S18 70.8 65.4 64.7 MGA_712 LOCUS_06970 sequence25:9201..9887(+) internal_stop_codon 9885..9887(+),9930..9932(+),10158..10160(+) WP_002288735.1 translational GTPase TypA 98.2 36.8 56.2 MGA_714 LOCUS_06990 sequence25:10653..11003(+) internal_stop_codon 10434..10436(+),10575..10577(+),10425..10427(+),10533..10535(+) WP_013384255.1 translational GTPase TypA 99.1 19.0 64.3 MGA_720 LOCUS_07050 sequence25:14485..14670(-) internal_stop_codon 14335..14337(-),14485..14487(-),14389..14391(-),14338..14340(-),14776..14778(-),14782..14784(-),14248..14250(-),14407..14409(-),14722..14724(-),14383..14385(-) WP_129735450.1 DNA polymerase III subunit alpha 88.5 4.3 59.3 MGA_737 LOCUS_07210 sequence27:387..590(-) internal_stop_codon 744..746(-),741..743(-),732..734(-),600..602(-) WP_011070420.1 membrane protein insertase YidC 56.7 7.0 57.9 MGA_769 LOCUS_07490 sequence29:9321..9521(+) internal_stop_codon 9798..9800(+),9519..9521(+),9678..9680(+),9720..9722(+),9288..9290(+),9588..9590(+),9291..9293(+),9234..9236(+) WP_164927265.1 M48 family metallopeptidase 89.4 14.3 47.5 MGA_777 LOCUS_07560 sequence30:3486..3641(-) internal_stop_codon 3483..3485(-),3309..3311(-),3672..3674(-),3252..3254(-),3282..3284(-),3666..3668(-),3486..3488(-),3759..3761(-),3690..3692(-),3264..3266(-),3267..3269(-) WP_004599762.1 aspartate--tRNA ligase 98.0 8.3 66.0 MGA_778 LOCUS_07570 sequence30:3867..4148(-) internal_stop_codon 3672..3674(-),4242..4244(-),3666..3668(-),3867..3869(-),4341..4343(-),3759..3761(-),3690..3692(-),3807..3809(-) WP_002871806.1 aspartate--tRNA ligase 100.0 15.6 57.0 MGA_781 LOCUS_07600 sequence30:5785..6249(+) internal_stop_codon 5575..5577(+),5638..5640(+),5770..5772(+),5590..5592(+),5728..5730(+),5596..5598(+),5548..5550(+) WP_002852184.1 polyphosphate kinase 2 95.5 50.2 46.9 MGA_826 LOCUS_08010 sequence34:9541..9702(-) internal_stop_codon 9985..9987(-),9970..9972(-),9856..9858(-),9880..9882(-),9817..9819(-),9721..9723(-),9808..9810(-),9763..9765(-),9958..9960(-) WP_002680220.1 serine--tRNA ligase 94.3 11.8 60.0 MGA_827 LOCUS_08020 sequence34:10552..10782(-) internal_stop_codon 10447..10449(-),10552..10554(-),10312..10314(-),10288..10290(-),10360..10362(-),10348..10350(-) WP_012583734.1 serine--tRNA ligase 100.0 18.6 46.8 MGA_828 LOCUS_08030 sequence35:77..262(+) internal_stop_codon 59..61(+),314..316(+),326..328(+),260..262(+) WP_052270496.1 DEAD/DEAH box helicase 90.2 15.2 69.1 MGA_829 LOCUS_08040 sequence35:437..880(+) internal_stop_codon 326..328(+),956..958(+),314..316(+),878..880(+),983..985(+),260..262(+) WP_011015951.1 DEAD/DEAH box helicase 100.0 27.8 53.1 MGA_835 LOCUS_08100 sequence35:4344..4556(+) internal_stop_codon 4581..4583(+),4629..4631(+),4173..4175(+),4647..4649(+),4554..4556(+),4185..4187(+),4626..4628(+) WP_012583439.1 DNA mismatch repair protein MutS 100.0 8.2 65.7 MGA_849 LOCUS_08240 sequence36:5253..5432(-) internal_stop_codon 5523..5525(-),5553..5555(-),5445..5447(-),5469..5471(-),5481..5483(-),5670..5672(-) WP_010943026.1 molecular chaperone HtpG 100.0 9.1 45.8 MGA_852 LOCUS_08270 sequence36:6312..6740(-) frameshift,internal_stop_codon 6789..6791(-),6756..6758(-),6147..6149(-),6762..6764(-),6312..6314(-) 6035 WP_002557148.1 molecular chaperone HtpG 100.0 22.9 41.5 MGA_853 LOCUS_08280 sequence36:6789..7079(-) internal_stop_codon 7095..7097(-),6789..6791(-),6756..6758(-),6762..6764(-) WP_011016311.1 molecular chaperone HtpG 99.0 15.7 58.9 MGA_865 LOCUS_08400 sequence37:8623..8757(+) internal_stop_codon 9040..9042(+),8977..8979(+),8986..8988(+),8863..8865(+),8755..8757(+),8938..8940(+) WP_003015534.1 ATP-dependent Clp endopeptidase proteolytic subunit ClpP 79.5 17.4 65.7 MGA_878 LOCUS_08520 sequence39:6618..6779(-) internal_stop_codon 7026..7028(-),6990..6992(-),6528..6530(-),6417..6419(-),6792..6794(-),6966..6968(-),6984..6986(-),6618..6620(-) WP_011837691.1 type IV pilus twitching motility protein PilT 98.1 14.7 61.5 MGA_879 LOCUS_08530 sequence39:6792..6929(-) internal_stop_codon 7026..7028(-),6990..6992(-),6528..6530(-),6966..6968(-),6984..6986(-),6618..6620(-),6792..6794(-) WP_012583239.1 type IV pilus twitching motility protein PilT 95.6 11.9 65.1 MGA_898 LOCUS_08700 sequence41:6004..6297(-) internal_stop_codon 6004..6006(-),5884..5886(-),5896..5898(-) WP_012583291.1 glycosyltransferase family 4 protein 99.0 25.3 37.5 MGA_909 LOCUS_08810 sequence42:6118..6390(-) internal_stop_codon 6628..6630(-),6544..6546(-),6673..6675(-),6556..6558(-),6589..6591(-),6445..6447(-) WP_011101712.1 valine--tRNA ligase 93.3 10.0 46.1 MGA_911 LOCUS_08830 sequence43:342..647(-) internal_stop_codon 693..695(-),684..686(-),882..884(-),660..662(-) WP_010965000.1 cell division protein FtsZ 99.0 26.0 32.0 MGA_912 LOCUS_08840 sequence43:882..1031(-) internal_stop_codon 1245..1247(-),660..662(-),1257..1259(-),1140..1142(-),1275..1277(-),882..884(-),693..695(-),1086..1088(-),1071..1073(-),1176..1178(-),684..686(-) WP_003386373.1 cell division protein FtsZ 87.8 11.7 60.5 MGA_929 LOCUS_08990 sequence45:4779..4913(+) internal_stop_codon 4581..4583(+),4575..4577(+),5085..5087(+),5088..5090(+),5097..5099(+),5139..5141(+),4770..4772(+),4956..4958(+),4974..4976(+),4911..4913(+),5166..5168(+) WP_010888737.1 Fe-S cluster assembly protein SufB 100.0 9.4 63.6 MGA_932 LOCUS_09020 sequence45:7382..7528(+) internal_stop_codon 7682..7684(+),7664..7666(+),7544..7546(+),7526..7528(+),7598..7600(+) WP_009872062.1 cysteine desulfurase 97.9 12.0 47.9 MGA_933 LOCUS_09030 sequence46:1..506(+) partial WP_003813106.1 dihydroorotate dehydrogenase 74.9 40.0 34.1 MGA_938 LOCUS_09080 sequence47:6238..6435(+) internal_stop_codon 6463..6465(+),6433..6435(+),6175..6177(+),6232..6234(+),6070..6072(+) WP_010889201.1 manganese-dependent inorganic pyrophosphatase 98.5 21.7 48.5 MGA_939 LOCUS_09090 sequence47:6741..7001(+) partial WP_005788413.1 RNA-binding protein 93.0 65.6 46.2 MGA_940 LOCUS_09100 sequence48:1554..1805(+) internal_stop_codon 1395..1397(+),1803..1805(+),1404..1406(+),1824..1826(+),1503..1505(+) WP_003701392.1 lysine--tRNA ligase 98.8 16.6 58.5 MGA_945 LOCUS_09150 sequence48:6637..6801(+) partial WP_004137938.1 DNA polymerase III subunit alpha 96.3 4.4 61.5 MGA_970 LOCUS_09380 sequence53:2409..2534(+) internal_stop_codon 2631..2633(+),2637..2639(+),2598..2600(+),2151..2153(+),2721..2723(+),2532..2534(+),2244..2246(+) WP_005694297.1 molecular chaperone DnaK 97.6 6.3 80.0 MGA_971 LOCUS_09390 sequence53:2805..2966(+) internal_stop_codon 2631..2633(+),2964..2966(+),3057..3059(+),3174..3176(+),2532..2534(+),2637..2639(+),2598..2600(+),2721..2723(+),3186..3188(+) WP_024502156.1 molecular chaperone DnaK 100.0 8.3 64.2 MGA_972 LOCUS_09400 sequence53:3555..3887(+) internal_stop_codon 3438..3440(+),3480..3482(+),3363..3365(+) WP_010964594.1 molecular chaperone DnaK 81.8 14.3 41.1 MGA_975 LOCUS_09420 sequence54:529..675(+) internal_stop_codon 364..366(+),331..333(+),469..471(+) WP_010867977.1 NADP-dependent malic enzyme 95.8 10.9 54.3 MGA_976 LOCUS_09430 sequence54:1946..2128(+) internal_stop_codon 1667..1669(+),2126..2128(+),2132..2134(+),2150..2152(+),2240..2242(+),2339..2341(+),2177..2179(+),2228..2230(+),1793..1795(+),1871..1873(+),2186..2188(+),1721..1723(+),1727..1729(+),1916..1918(+),2360..2362(+) WP_005817149.1 UDP-glucose/GDP-mannose dehydrogenase family protein 100.0 13.6 60.0 MGA_1004 LOCUS_09690 sequence61:4191..4469(+) partial WP_012258894.1 F0F1 ATP synthase subunit gamma 83.7 26.6 54.5 MGA_1010 LOCUS_09740 sequence62:3460..3780(+) internal_stop_codon 3778..3780(+),3970..3972(+),3817..3819(+) WP_001085675.1 50S ribosomal protein L1 86.8 40.6 51.6 MGA_1011 LOCUS_09750 sequence62:3853..3972(+) internal_stop_codon 3778..3780(+),3970..3972(+),4102..4104(+),3817..3819(+),4150..4152(+) WP_010931846.1 50S ribosomal protein L1 100.0 16.9 64.1 MGA_1030 LOCUS_09910 sequence65:1030..1239(+) internal_stop_codon 1531..1533(+),1402..1404(+),1420..1422(+),1237..1239(+),1285..1287(+) WP_012546013.1 type IV-A pilus assembly ATPase PilB 98.6 12.0 51.5 MGA_1042 LOCUS_10000 sequence67:1058..1243(+) internal_stop_codon 980..982(+),884..886(+),1409..1411(+),1241..1243(+),1448..1450(+),1460..1462(+),1370..1372(+),1427..1429(+),1046..1048(+),905..907(+),791..793(+),863..865(+),1028..1030(+),1334..1336(+),1298..1300(+),1274..1276(+) WP_011836836.1 2-isopropylmalate synthase 100.0 10.0 57.4 MGA_1044 LOCUS_10020 sequence67:2679..2804(+) internal_stop_codon 2634..2636(+),2889..2891(+),2637..2639(+),2619..2621(+),2802..2804(+),2670..2672(+),3042..3044(+),2604..2606(+),2916..2918(+) WP_000287157.1 glycine--tRNA ligase 100.0 9.0 51.2 MGA_1045 LOCUS_10030 sequence67:3438..3569(+) internal_stop_codon 3852..3854(+),3261..3263(+),3702..3704(+),3327..3329(+),3432..3434(+),3807..3809(+),3777..3779(+),3567..3569(+),3675..3677(+),3294..3296(+),3399..3401(+) WP_013363202.1 glycine--tRNA ligase 97.7 8.3 64.3 MGA_1059 LOCUS_10140 sequence70:2219..2416(-) internal_stop_codon 2138..2140(-),2219..2221(-) WP_010966183.1 radical SAM protein 89.2 17.6 45.9 MGA_1060 LOCUS_10150 sequence71:1..634(+) partial WP_009291950.1 HAD-IIIC family phosphatase 97.1 35.7 38.0 MGA_1063 LOCUS_10180 sequence71:1861..2598(+) partial WP_003022507.1 bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG 40.8 46.8 38.0 MGA_1077 LOCUS_10280 sequence75:1..617(+) partial WP_002864265.1 N,N'-diacetyllegionaminate synthase 93.6 57.5 40.2 MGA_1079 LOCUS_10300 sequence75:1777..2559(+) partial WP_010881395.1 methionyl-tRNA formyltransferase 48.1 41.3 34.9 MGA_1089 LOCUS_10380 sequence78:1902..2129(-) internal_stop_codon 2154..2156(-),2397..2399(-),1902..1904(-),1674..1676(-),1707..1709(-) WP_003019768.1 F0F1 ATP synthase subunit beta 100.0 16.4 88.0 MGA_1090 LOCUS_10390 sequence78:2154..2378(-) internal_stop_codon 2154..2156(-),2529..2531(-),2397..2399(-),1902..1904(-),2505..2507(-),2421..2423(-),2499..2501(-) WP_010933887.1 F0F1 ATP synthase subunit beta 100.0 16.0 83.8 MGA_1091 LOCUS_10400 sequence78:2529..2696(-) internal_stop_codon 2814..2816(-),2397..2399(-),2760..2762(-),2715..2717(-),2529..2531(-),2772..2774(-),2505..2507(-),2421..2423(-),2499..2501(-) WP_011016335.1 F0F1 ATP synthase subunit beta 100.0 11.9 54.5 MGA_1101 LOCUS_10490 sequence82:2085..2453(-) internal_stop_codon 2085..2087(-),1989..1991(-),1830..1832(-),1956..1958(-),2523..2525(-),1914..1916(-),2481..2483(-),2508..2510(-),1821..1823(-),2472..2474(-),2496..2498(-) WP_010880800.1 methionine--tRNA ligase 77.9 19.5 53.6 MGA_1103 LOCUS_10500 sequence83:301..423(-) internal_stop_codon 202..204(-),301..303(-),475..477(-),526..528(-) WP_003421189.1 50S ribosomal protein L11 97.5 27.7 61.5 MGA_1112 LOCUS_10580 sequence86:218..412(-) internal_stop_codon 545..547(-),425..427(-),416..418(-),437..439(-),533..535(-) WP_010937589.1 glycosyltransferase 79.7 13.5 47.1 MGA_1113 LOCUS_10590 sequence86:545..838(-) internal_stop_codon 545..547(-),425..427(-),416..418(-),437..439(-),533..535(-) WP_012583291.1 glycosyltransferase family 4 protein 99.0 25.3 36.5