{
    "type": "genome",
    "identifier": "GCA_018659705.1",
    "organism": "Oceanospirillaceae bacterium",
    "title": "Oceanospirillaceae bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "The University of Melbourne",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_018659705.1",
        "bioproject": "PRJNA630981",
        "biosample": "SAMN14915650",
        "wgs_master": "JABJLW000000000.1",
        "refseq_category": "na",
        "taxid": "1899355",
        "species_taxid": "1899355",
        "organism_name": "Oceanospirillaceae bacterium",
        "infraspecific_name": "",
        "isolate": "SI075_bin123",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/06/02",
        "asm_name": "ASM1865970v1",
        "submitter": "The University of Melbourne",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/659/705/GCA_018659705.1_ASM1865970v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-06-02",
    "dateModified": "2021-06-02",
    "datePublished": "2021-06-02",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Oceanospirillaceae bacterium"
        ],
        "sample_taxid": [
            "1899355"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Canada: Vancouver, Saanich Inlet"
        ],
        "sample_host_location_id": [],
        "data_size": "0.694 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 70.83,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2407122",
        "Number of Sequences": "113",
        "Longest Sequences (bp)": "137034",
        "N50 (bp)": "40172",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "45.3",
        "Number of CDSs": "2190",
        "Average Protein Length": "319.0",
        "Coding Ratio (%)": "87.1",
        "Number of rRNAs": "0",
        "Number of tRNAs": "34",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 70.83,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_002335115.1",
                "gtdb_species": "s__ASP10-02a sp002335115",
                "ani": 99.4061,
                "matched_fragments": 602,
                "total_fragments": 749,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Nitrincolaceae;g__ASP10-02a",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.15",
                "min_intra_species_ani": "95.37",
                "mean_intra_species_af": "0.85",
                "min_intra_species_af": "0.79",
                "num_clustered_genomes": 13,
                "status": "conclusive"
            },
            {
                "accession": "GCA_905182035.1",
                "gtdb_species": "s__ASP10-02a sp905182035",
                "ani": 78.7965,
                "matched_fragments": 350,
                "total_fragments": 749,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Nitrincolaceae;g__ASP10-02a",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002312935.1",
                "gtdb_species": "s__ASP10-02a sp002312935",
                "ani": 78.6251,
                "matched_fragments": 286,
                "total_fragments": 749,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Nitrincolaceae;g__ASP10-02a",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.42",
                "min_intra_species_ani": "99.42",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.91",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_002470565.1",
                "gtdb_species": "s__ASP10-02a sp002470565",
                "ani": 78.1346,
                "matched_fragments": 208,
                "total_fragments": 749,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Nitrincolaceae;g__ASP10-02a",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.72",
                "min_intra_species_ani": "99.72",
                "mean_intra_species_af": "0.90",
                "min_intra_species_af": "0.90",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_018647765.1",
                "gtdb_species": "s__ASP10-02a sp018647765",
                "ani": 78.0409,
                "matched_fragments": 170,
                "total_fragments": 749,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Nitrincolaceae;g__ASP10-02a",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.86",
                "min_intra_species_ani": "99.85",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.93",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_003523085.1",
                "gtdb_species": "s__ASP10-02a sp003523085",
                "ani": 77.1881,
                "matched_fragments": 186,
                "total_fragments": 749,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Nitrincolaceae;g__ASP10-02a",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.309,
        "cell_length": 0.251,
        "doubling_h": 1.659,
        "growth_tmp": 25.318,
        "optimum_tmp": 27.678,
        "optimum_ph": 7.525,
        "genome_size": 4109665.431,
        "gc_content": 48.329,
        "coding_genes": 3948.866,
        "rRNA16S_genes": 5.15,
        "tRNA_genes": 63.2,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.977,
        "range_salinity": 1.0,
        "facultative_respiration": 0.14,
        "anaerobic_respiration": 0.0,
        "aerobic_respiration": 0.859,
        "mesophilic_range_tmp": 0.5,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.5,
        "bacillus_cell_shape": 0.857,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.023,
        "spiral_cell_shape": 0.119
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__Pseudomonadales",
        "f__Nitrincolaceae",
        "g__ASP10-02a",
        "s__ASP10-02a sp002335115"
    ],
    "_genome_taxon": [
        "Oceanospirillaceae",
        "bacterium",
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__Pseudomonadales",
        "f__Nitrincolaceae",
        "g__ASP10-02a",
        "s__ASP10-02a sp002335115",
        "Bacteria",
        "Pseudomonadota",
        "Gammaproteobacteria",
        "Pseudomonadales",
        "Nitrincolaceae",
        "ASP10-02a",
        "ASP10-02a",
        "sp002335115"
    ],
    "_meo": [
        {
            "id": "MEO_0000041",
            "label": "marine water"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}