{ "type": "genome", "identifier": "GCA_018665205.1", "organism": "Rhodospirillaceae bacterium", "title": "Rhodospirillaceae bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "The University of Melbourne", "publication": [ {} ], "properties": { "assembly_accession": "GCA_018665205.1", "bioproject": "PRJNA630981", "biosample": "SAMN14915441", "wgs_master": "JABJDV000000000.1", "refseq_category": "na", "taxid": "1898112", "species_taxid": "1898112", "organism_name": "Rhodospirillaceae bacterium", "infraspecific_name": "", "isolate": "SI073_bin87", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/06/02", "asm_name": "ASM1866520v1", "submitter": "The University of Melbourne", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/665/205/GCA_018665205.1_ASM1866520v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-06-02", "dateModified": "2021-06-02", "datePublished": "2021-06-02", "_annotation": { "sample_count": 1, "sample_organism": [ "Rhodospirillaceae bacterium" ], "sample_taxid": [ "1898112" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Canada: Vancouver, Saanich Inlet" ], "sample_host_location_id": [], "data_size": "1.025 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 81.48, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "3621747", "Number of Sequences": "720", "Longest Sequences (bp)": "21367", "N50 (bp)": "5824", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "61.4", "Number of CDSs": "2914", "Average Protein Length": "288.3", "Coding Ratio (%)": "69.6", "Number of rRNAs": "0", "Number of tRNAs": "21", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Oceanibaculum nanhaiense", "strain": "strain=L54-1-50", "accession": "GCA_002148795.1", "taxid": 1909734, "species_taxid": 1909734, "relation_to_type": "type", "validated": true, "ani": 75.8576, "matched_fragments": 59, "total_fragments": 828, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hypericibacter adhaerens", "strain": "strain=R5959", "accession": "GCA_008728835.1", "taxid": 2602016, "species_taxid": 2602016, "relation_to_type": "type", "validated": true, "ani": 75.8279, "matched_fragments": 92, "total_fragments": 828, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Dongia mobilis", "strain": "strain=CGMCC 1.7660", "accession": "GCA_004363235.1", "taxid": 578943, "species_taxid": 578943, "relation_to_type": "type", "validated": true, "ani": 75.8096, "matched_fragments": 66, "total_fragments": 828, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Kaistia granuli", "strain": "strain=Ko04", "accession": "GCA_000380505.1", "taxid": 363259, "species_taxid": 363259, "relation_to_type": "type", "validated": true, "ani": 75.753, "matched_fragments": 51, "total_fragments": 828, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bradyrhizobium stylosanthis", "strain": "strain=BR 446", "accession": "GCA_001641335.1", "taxid": 1803665, "species_taxid": 1803665, "relation_to_type": "type", "validated": true, "ani": 75.5084, "matched_fragments": 51, "total_fragments": 828, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bradyrhizobium nitroreducens", "strain": "strain=TSA1", "accession": "GCA_002776695.1", 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