{
    "type": "genome",
    "identifier": "GCA_018679705.1",
    "organism": "Muriicola sp.",
    "title": "Muriicola sp.",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "Monash University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_018679705.1",
        "bioproject": "PRJNA623061",
        "biosample": "SAMN19246900",
        "wgs_master": "JAHHKP000000000.1",
        "refseq_category": "na",
        "taxid": "2020856",
        "species_taxid": "2020856",
        "organism_name": "Muriicola sp.",
        "infraspecific_name": "",
        "isolate": "LDS-18",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/06/02",
        "asm_name": "ASM1867970v1",
        "submitter": "Monash University",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/679/705/GCA_018679705.1_ASM1867970v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-06-02",
    "dateModified": "2021-06-02",
    "datePublished": "2021-06-02",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Muriicola sp."
        ],
        "sample_taxid": [
            "2020856"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Australia: Port Phillip Bay"
        ],
        "sample_host_location_id": [],
        "data_size": "0.451 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 48.61,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1555599",
        "Number of Sequences": "340",
        "Longest Sequences (bp)": "19165",
        "N50 (bp)": "5078",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "42.7",
        "Number of CDSs": "1126",
        "Average Protein Length": "291.7",
        "Coding Ratio (%)": "63.3",
        "Number of rRNAs": "2",
        "Number of tRNAs": "7",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Muriicola soli",
                "strain": "strain=MMS17-SY002",
                "accession": "GCA_004139715.1",
                "taxid": 2507538,
                "species_taxid": 2507538,
                "relation_to_type": "type",
                "validated": true,
                "ani": 87.3213,
                "matched_fragments": 305,
                "total_fragments": 326,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Muriicola jejuensis",
                "strain": "strain=KCTC 22299",
                "accession": "GCA_010671595.1",
                "taxid": 504488,
                "species_taxid": 504488,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.8781,
                "matched_fragments": 95,
                "total_fragments": 326,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Muriicola marianensis",
                "strain": "strain=CGMCC 1.12606",
                "accession": "GCA_014638095.1",
                "taxid": 1324801,
                "species_taxid": 1324801,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.4508,
                "matched_fragments": 98,
                "total_fragments": 326,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 48.61,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_013042315.1",
                "gtdb_species": "s__Muriicola sp013042315",
                "ani": 98.3537,
                "matched_fragments": 278,
                "total_fragments": 326,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Muriicola",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.31",
                "min_intra_species_ani": "99.31",
                "mean_intra_species_af": "0.85",
                "min_intra_species_af": "0.85",
                "num_clustered_genomes": 2,
                "status": "conclusive"
            },
            {
                "accession": "GCF_004139715.1",
                "gtdb_species": "s__Muriicola sp004139715",
                "ani": 87.3213,
                "matched_fragments": 305,
                "total_fragments": 326,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Muriicola",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_013042255.1",
                "gtdb_species": "s__Muriicola sp013042255",
                "ani": 80.4622,
                "matched_fragments": 150,
                "total_fragments": 326,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Muriicola",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.63",
                "min_intra_species_ani": "98.55",
                "mean_intra_species_af": "0.78",
                "min_intra_species_af": "0.75",
                "num_clustered_genomes": 6,
                "status": "-"
            },
            {
                "accession": "GCF_014638095.1",
                "gtdb_species": "s__Muriicola marianensis",
                "ani": 77.4508,
                "matched_fragments": 98,
                "total_fragments": 326,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Muriicola",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_013042125.1",
                "gtdb_species": "s__Muriicola sp013042125",
                "ani": 77.3023,
                "matched_fragments": 76,
                "total_fragments": 326,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Muriicola",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.347,
        "cell_length": 0.267,
        "doubling_h": null,
        "growth_tmp": 28.0,
        "optimum_tmp": 27.667,
        "optimum_ph": 7.75,
        "genome_size": 3299848.0,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 0.0,
        "aerobic_respiration": 1.0,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Flavobacteriales",
        "f__Flavobacteriaceae",
        "g__Muriicola",
        "s__Muriicola sp013042315"
    ],
    "_genome_taxon": [
        "Muriicola",
        "sp.",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Flavobacteriales",
        "f__Flavobacteriaceae",
        "g__Muriicola",
        "s__Muriicola sp013042315",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Flavobacteriales",
        "Flavobacteriaceae",
        "Muriicola",
        "Muriicola",
        "sp013042315"
    ],
    "_meo": [
        {
            "id": "MEO_0000192",
            "label": "beach sand"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}