{ "type": "genome", "identifier": "GCA_018698145.1", "organism": "Campylobacteraceae bacterium", "title": "Campylobacteraceae bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "The University of Melbourne", "publication": [ {} ], "properties": { "assembly_accession": "GCA_018698145.1", "bioproject": "PRJNA630981", "biosample": "SAMN14915030", "wgs_master": "JABIOA000000000.1", "refseq_category": "na", "taxid": "2268179", "species_taxid": "2268179", "organism_name": "Campylobacteraceae bacterium", "infraspecific_name": "", "isolate": "SI060_bin58", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/06/02", "asm_name": "ASM1869814v1", "submitter": "The University of Melbourne", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/698/145/GCA_018698145.1_ASM1869814v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-06-02", "dateModified": "2021-06-02", "datePublished": "2021-06-02", "_annotation": { "sample_count": 1, "sample_organism": [ "Campylobacteraceae bacterium" ], "sample_taxid": [ "2268179" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Canada: Vancouver, Saanich Inlet" ], "sample_host_location_id": [], "data_size": "0.342 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 95.83, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "1252845", "Number of Sequences": "105", "Longest Sequences (bp)": "75033", "N50 (bp)": "20765", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "28.3", "Number of CDSs": "1251", "Average Protein Length": "291.2", "Coding Ratio (%)": "87.2", "Number of rRNAs": "0", "Number of tRNAs": "29", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Malaciobacter pacificus", "strain": "strain=LMG 26638", "accession": "GCA_004214795.1", "taxid": 1080223, "species_taxid": 1080223, "relation_to_type": "type", "validated": true, "ani": 77.7474, "matched_fragments": 120, "total_fragments": 362, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arcobacter venerupis", "strain": "strain=LMG 26156", "accession": "GCA_013201665.1", "taxid": 1054033, "species_taxid": 1054033, "relation_to_type": "type", "validated": true, "ani": 77.6567, "matched_fragments": 120, "total_fragments": 362, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arcobacter aquimarinus", "strain": "strain=CECT 8442", "accession": "GCA_004115795.1", "taxid": 1315211, "species_taxid": 1315211, "relation_to_type": "type", "validated": true, "ani": 77.6398, "matched_fragments": 110, "total_fragments": 362, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arcobacter venerupis", "strain": "strain=CECT7836", "accession": "GCA_004023405.1", "taxid": 1054033, "species_taxid": 1054033, "relation_to_type": "type", "validated": true, "ani": 77.6299, "matched_fragments": 118, "total_fragments": 362, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halarcobacter bivalviorum", "strain": "strain=LMG 26154", "accession": "GCA_003346815.1", "taxid": 663364, "species_taxid": 663364, "relation_to_type": "type", "validated": true, "ani": 77.6293, "matched_fragments": 117, "total_fragments": 362, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arcobacter ellisii", "strain": "strain=LMG 26155", "accession": "GCA_003544915.1", "taxid": 913109, "species_taxid": 913109, "relation_to_type": "type", "validated": true, "ani": 77.6281, "matched_fragments": 135, "total_fragments": 362, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Malaciobacter molluscorum", "strain": "strain=CECT 7696", "accession": "GCA_003544935.1", "taxid": 1032072, "species_taxid": 1032072, "relation_to_type": "type", "validated": true, "ani": 77.6041, "matched_fragments": 139, "total_fragments": 362, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arcobacter ellisii", "strain": "strain=CECT 7837", "accession": "GCA_004115815.1", "taxid": 913109, "species_taxid": 913109, "relation_to_type": "type", "validated": true, "ani": 77.5883, "matched_fragments": 136, "total_fragments": 362, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arcobacter suis", "strain": "strain=CECT7833", "accession": "GCA_004023465.1", "taxid": 1278212, "species_taxid": 1278212, "relation_to_type": "type", "validated": true, "ani": 77.5402, "matched_fragments": 122, "total_fragments": 362, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halarcobacter bivalviorum", "strain": "strain=CECT 7835", "accession": "GCA_004116675.1", "taxid": 663364, "species_taxid": 663364, "relation_to_type": "type", "validated": true, "ani": 77.5349, "matched_fragments": 121, "total_fragments": 362, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Malaciobacter molluscorum", "strain": "strain=F98-3", "accession": "GCA_002701265.1", "taxid": 1032072, "species_taxid": 1032072, "relation_to_type": "type", "validated": true, "ani": 77.5142, "matched_fragments": 138, "total_fragments": 362, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arcobacter defluvii", "strain": "strain=LMG 25694", "accession": "GCA_013201725.1", "taxid": 873191, "species_taxid": 873191, "relation_to_type": "type", "validated": true, "ani": 77.4616, "matched_fragments": 137, "total_fragments": 362, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arcobacter suis", "strain": "strain=CECT 7833", "accession": "GCA_003544815.1", "taxid": 1278212, "species_taxid": 1278212, "relation_to_type": "type", "validated": true, "ani": 77.4609, "matched_fragments": 129, "total_fragments": 362, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arcobacter defluvii", "strain": "strain=CECT 7697", "accession": "GCA_004115775.1", "taxid": 873191, "species_taxid": 873191, "relation_to_type": "type", "validated": true, "ani": 77.4568, "matched_fragments": 141, "total_fragments": 362, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aliarcobacter cryaerophilus", "strain": "strain=LMG 24291", "accession": "GCA_002992955.1", "taxid": 28198, "species_taxid": 28198, "relation_to_type": "suspected-type", "validated": true, "ani": 77.429, "matched_fragments": 84, "total_fragments": 362, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aliarcobacter cryaerophilus", "strain": "strain=ATCC 43158", "accession": "GCA_003660105.1", "taxid": 28198, "species_taxid": 28198, "relation_to_type": "suspected-type", "validated": true, "ani": 77.4093, "matched_fragments": 84, "total_fragments": 362, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aliarcobacter cryaerophilus", "strain": "strain=LMG 9904", "accession": "GCA_006165035.1", "taxid": 28198, "species_taxid": 28198, "relation_to_type": "suspected-type", "validated": true, "ani": 77.4086, "matched_fragments": 84, "total_fragments": 362, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aliarcobacter thereius", "strain": "strain=LMG 24486", "accession": "GCA_024584025.1", "taxid": 544718, "species_taxid": 544718, "relation_to_type": "type", "validated": true, "ani": 77.3888, "matched_fragments": 93, "total_fragments": 362, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Malaciobacter marinus", "strain": "strain=JCM 15502", "accession": "GCA_003544855.1", "taxid": 505249, "species_taxid": 505249, "relation_to_type": "type", "validated": true, "ani": 77.3842, "matched_fragments": 127, "total_fragments": 362, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aliarcobacter skirrowii", "strain": "strain=LMG 6621", "accession": "GCA_004115735.1", "taxid": 28200, "species_taxid": 28200, "relation_to_type": "type", "validated": true, "ani": 76.9535, "matched_fragments": 95, "total_fragments": 362, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aliarcobacter skirrowii", "strain": "strain=LMG 6621", "accession": "GCA_024584055.1", "taxid": 28200, "species_taxid": 28200, "relation_to_type": "type", "validated": true, "ani": 76.9307, "matched_fragments": 95, "total_fragments": 362, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aliarcobacter faecis", 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