{
    "type": "genome",
    "identifier": "GCA_018698465.1",
    "organism": "Flavobacteriales bacterium",
    "title": "Flavobacteriales bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "The University of Melbourne",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_018698465.1",
        "bioproject": "PRJNA630981",
        "biosample": "SAMN14915043",
        "wgs_master": "JABION000000000.1",
        "refseq_category": "na",
        "taxid": "2021391",
        "species_taxid": "2021391",
        "organism_name": "Flavobacteriales bacterium",
        "infraspecific_name": "",
        "isolate": "SI060_bin7",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/06/02",
        "asm_name": "ASM1869846v1",
        "submitter": "The University of Melbourne",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/698/465/GCA_018698465.1_ASM1869846v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-06-02",
    "dateModified": "2021-06-02",
    "datePublished": "2021-06-02",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Flavobacteriales bacterium"
        ],
        "sample_taxid": [
            "2021391"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Canada: Vancouver, Saanich Inlet"
        ],
        "sample_host_location_id": [],
        "data_size": "0.325 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 64.81,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1170970",
        "Number of Sequences": "130",
        "Longest Sequences (bp)": "36434",
        "N50 (bp)": "12905",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "31.5",
        "Number of CDSs": "923",
        "Average Protein Length": "335.5",
        "Coding Ratio (%)": "79.3",
        "Number of rRNAs": "1",
        "Number of tRNAs": "11",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 64.81,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_018647945.1",
                "gtdb_species": "s__GCA-002697625 sp018647945",
                "ani": 99.5845,
                "matched_fragments": 287,
                "total_fragments": 319,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__BACL11;g__GCA-002697625",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.64",
                "min_intra_species_ani": "99.58",
                "mean_intra_species_af": "0.90",
                "min_intra_species_af": "0.90",
                "num_clustered_genomes": 3,
                "status": "conclusive"
            },
            {
                "accession": "GCA_905478555.1",
                "gtdb_species": "s__GCA-002697625 sp905478555",
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                "matched_fragments": 223,
                "total_fragments": 319,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__BACL11;g__GCA-002697625",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.63",
                "min_intra_species_ani": "96.63",
                "mean_intra_species_af": "0.87",
                "min_intra_species_af": "0.87",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_902514225.1",
                "gtdb_species": "s__GCA-002697625 sp902514225",
                "ani": 80.8865,
                "matched_fragments": 123,
                "total_fragments": 319,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__BACL11;g__GCA-002697625",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_018695965.1",
                "gtdb_species": "s__GCA-002697625 sp018695965",
                "ani": 80.8088,
                "matched_fragments": 158,
                "total_fragments": 319,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__BACL11;g__GCA-002697625",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.45",
                "min_intra_species_ani": "97.65",
                "mean_intra_species_af": "0.78",
                "min_intra_species_af": "0.72",
                "num_clustered_genomes": 6,
                "status": "-"
            },
            {
                "accession": "GCA_002710495.1",
                "gtdb_species": "s__GCA-002697625 sp002710495",
                "ani": 80.0051,
                "matched_fragments": 153,
                "total_fragments": 319,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__BACL11;g__GCA-002697625",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_012960805.1",
                "gtdb_species": "s__UWMA-0277 sp012960805",
                "ani": 78.7156,
                "matched_fragments": 99,
                "total_fragments": 319,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__BACL11;g__UWMA-0277",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_905612305.1",
                "gtdb_species": "s__UWMA-0277 sp905612305",
                "ani": 78.595,
                "matched_fragments": 83,
                "total_fragments": 319,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__BACL11;g__UWMA-0277",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_905478765.1",
                "gtdb_species": "s__UWMA-0277 sp905478765",
                "ani": 78.1028,
                "matched_fragments": 94,
                "total_fragments": 319,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__BACL11;g__UWMA-0277",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_012960835.1",
                "gtdb_species": "s__DUAL01 sp012960835",
                "ani": 77.8319,
                "matched_fragments": 88,
                "total_fragments": 319,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__BACL11;g__DUAL01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002696275.1",
                "gtdb_species": "s__GCA-002697625 sp002696275",
                "ani": 77.7978,
                "matched_fragments": 111,
                "total_fragments": 319,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__BACL11;g__GCA-002697625",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.337,
        "cell_length": 0.308,
        "doubling_h": 1.285,
        "growth_tmp": 26.455,
        "optimum_tmp": 26.685,
        "optimum_ph": 7.271,
        "genome_size": 3861663.667,
        "gc_content": 35.517,
        "coding_genes": 2961.142,
        "rRNA16S_genes": 3.684,
        "tRNA_genes": 48.763,
        "gram_stain": 0.0,
        "sporulation": 0.007,
        "motility": 0.372,
        "range_salinity": 0.615,
        "facultative_respiration": 0.042,
        "anaerobic_respiration": 0.012,
        "aerobic_respiration": 0.945,
        "mesophilic_range_tmp": 0.898,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.101,
        "bacillus_cell_shape": 0.982,
        "coccus_cell_shape": 0.005,
        "filament_cell_shape": 0.002,
        "coccobacillus_cell_shape": 0.01,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Flavobacteriales",
        "f__BACL11",
        "g__GCA-002697625",
        "s__GCA-002697625 sp018647945"
    ],
    "_genome_taxon": [
        "Flavobacteriales",
        "bacterium",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Flavobacteriales",
        "f__BACL11",
        "g__GCA-002697625",
        "s__GCA-002697625 sp018647945",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Flavobacteriales",
        "BACL11",
        "GCA-002697625",
        "GCA-002697625",
        "sp018647945"
    ],
    "_meo": [
        {
            "id": "MEO_0000041",
            "label": "marine water"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}