{
    "type": "genome",
    "identifier": "GCA_018716625.1",
    "organism": "Candidatus Galligastranaerophilus intestinavium",
    "title": "Candidatus Galligastranaerophilus intestinavium",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "Quadram Institutte",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_018716625.1",
        "bioproject": "PRJNA543206",
        "biosample": "SAMN15816967",
        "wgs_master": "DVJQ00000000.1",
        "refseq_category": "na",
        "taxid": "2840836",
        "species_taxid": "2840836",
        "organism_name": "Candidatus Galligastranaerophilus intestinavium",
        "infraspecific_name": "",
        "isolate": "CHK152-2871",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/06/04",
        "asm_name": "ASM1871662v1",
        "submitter": "Quadram Institutte",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/716/625/GCA_018716625.1_ASM1871662v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-06-04",
    "dateModified": "2021-06-04",
    "datePublished": "2021-06-04",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Candidatus Galligastranaerophilus intestinavium"
        ],
        "sample_taxid": [
            "2840836"
        ],
        "sample_host_organism": [
            "Gallus gallus"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "not applicable"
        ],
        "sample_host_location_id": [],
        "data_size": "0.495 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.83,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1755909",
        "Number of Sequences": "76",
        "Longest Sequences (bp)": "83099",
        "N50 (bp)": "32487",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "35.6",
        "Number of CDSs": "1706",
        "Average Protein Length": "306.9",
        "Coding Ratio (%)": "89.5",
        "Number of rRNAs": "1",
        "Number of tRNAs": "38",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 95.83,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_018716625.1",
                "gtdb_species": "s__Galligastranaerophilus intestinavium",
                "ani": 100.0,
                "matched_fragments": 539,
                "total_fragments": 543,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Vampirovibrionia;o__Gastranaerophilales;f__RUG14156;g__Galligastranaerophilus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCA_018713115.1",
                "gtdb_species": "s__Galligastranaerophilus faecipullorum",
                "ani": 79.368,
                "matched_fragments": 286,
                "total_fragments": 543,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Vampirovibrionia;o__Gastranaerophilales;f__RUG14156;g__Galligastranaerophilus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_018715855.1",
                "gtdb_species": "s__Galligastranaerophilus_A intestinigallinarum",
                "ani": 77.1596,
                "matched_fragments": 58,
                "total_fragments": 543,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Vampirovibrionia;o__Gastranaerophilales;f__RUG14156;g__Galligastranaerophilus_A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.66",
                "min_intra_species_ani": "98.66",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.93",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_910586855.1",
                "gtdb_species": "s__MGBC122484 sp910586855",
                "ani": 76.8419,
                "matched_fragments": 90,
                "total_fragments": 543,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Vampirovibrionia;o__Gastranaerophilales;f__RUG14156;g__MGBC122484",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_910578465.1",
                "gtdb_species": "s__MGBC122484 sp910578465",
                "ani": 76.8018,
                "matched_fragments": 72,
                "total_fragments": 543,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Vampirovibrionia;o__Gastranaerophilales;f__RUG14156;g__MGBC122484",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_910587815.1",
                "gtdb_species": "s__MGBC122484 sp910587815",
                "ani": 76.7328,
                "matched_fragments": 80,
                "total_fragments": 543,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Vampirovibrionia;o__Gastranaerophilales;f__RUG14156;g__MGBC122484",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_910587245.1",
                "gtdb_species": "s__MGBC122484 sp910587245",
                "ani": 76.394,
                "matched_fragments": 74,
                "total_fragments": 543,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Vampirovibrionia;o__Gastranaerophilales;f__RUG14156;g__MGBC122484",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_910587375.1",
                "gtdb_species": "s__MGBC122484 sp910587375",
                "ani": 76.3742,
                "matched_fragments": 77,
                "total_fragments": 543,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Vampirovibrionia;o__Gastranaerophilales;f__RUG14156;g__MGBC122484",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_905234865.1",
                "gtdb_species": "s__Galligastranaerophilus_A sp905234865",
                "ani": 76.3427,
                "matched_fragments": 58,
                "total_fragments": 543,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Vampirovibrionia;o__Gastranaerophilales;f__RUG14156;g__Galligastranaerophilus_A",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017415185.1",
                "gtdb_species": "s__RUG14156 sp017415185",
                "ani": 76.3296,
                "matched_fragments": 61,
                "total_fragments": 543,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Vampirovibrionia;o__Gastranaerophilales;f__RUG14156;g__RUG14156",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017402995.1",
                "gtdb_species": "s__RUG14156 sp017402995",
                "ani": 75.8411,
                "matched_fragments": 64,
                "total_fragments": 543,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Vampirovibrionia;o__Gastranaerophilales;f__RUG14156;g__RUG14156",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Cyanobacteriota",
        "c__Vampirovibrionia",
        "o__Gastranaerophilales",
        "f__RUG14156",
        "g__Galligastranaerophilus",
        "s__Galligastranaerophilus intestinavium"
    ],
    "_genome_taxon": [
        "Candidatus",
        "Galligastranaerophilus",
        "intestinavium",
        "d__Bacteria",
        "p__Cyanobacteriota",
        "c__Vampirovibrionia",
        "o__Gastranaerophilales",
        "f__RUG14156",
        "g__Galligastranaerophilus",
        "s__Galligastranaerophilus intestinavium",
        "Bacteria",
        "Cyanobacteriota",
        "Vampirovibrionia",
        "Gastranaerophilales",
        "RUG14156",
        "Galligastranaerophilus",
        "Galligastranaerophilus",
        "intestinavium"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}