{ "type": "genome", "identifier": "GCA_018822775.1", "organism": "Actinomycetota bacterium", "title": "Actinomycetota bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "Department of Ecology and Genetics, Limnology and Science for Life Laboratory, Uppsala University", "publication": [ {} ], "properties": { "assembly_accession": "GCA_018822775.1", "bioproject": "PRJNA627556", "biosample": "SAMN19298226", "wgs_master": "JAHJJV000000000.1", "refseq_category": "na", "taxid": "2900548", "species_taxid": "2900548", "organism_name": "Actinomycetota bacterium", "infraspecific_name": "", "isolate": "Modern_marine_rock_biofilm.mb.52", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/06/09", "asm_name": "ASM1882277v1", "submitter": "Department of Ecology and Genetics, Limnology and Science for Life Laboratory, Uppsala University", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/822/775/GCA_018822775.1_ASM1882277v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-06-09", "dateModified": "2021-06-09", "datePublished": "2021-06-09", "_annotation": { "sample_count": 1, "sample_organism": [ "Actinomycetia bacterium" ], "sample_taxid": [ "1883427" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Sweden" ], "sample_host_location_id": [], "data_size": "1.088 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, 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"matched_fragments": 59, "total_fragments": 1260, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudonocardia broussonetiae", "strain": "strain=Gen 01", "accession": "GCA_013155125.1", "taxid": 2736640, "species_taxid": 2736640, "relation_to_type": "type", "validated": true, "ani": 75.1769, "matched_fragments": 97, "total_fragments": 1260, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinokineospora enzanensis", "strain": "strain=DSM 44649", "accession": "GCA_000374445.1", "taxid": 155975, "species_taxid": 155975, "relation_to_type": "type", "validated": true, "ani": 75.1358, "matched_fragments": 74, "total_fragments": 1260, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sciscionella marina", "strain": "strain=DSM 45152", "accession": "GCA_000379465.1", "taxid": 508770, "species_taxid": 508770, "relation_to_type": "type", "validated": true, "ani": 75.0656, "matched_fragments": 56, "total_fragments": 1260, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphaerisporangium krabiense", "strain": "strain=DSM 45790", "accession": "GCA_014200435.1", "taxid": 763782, "species_taxid": 763782, "relation_to_type": "type", "validated": true, "ani": 75.0654, "matched_fragments": 99, "total_fragments": 1260, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphaerisporangium krabiense", "strain": "strain=NBRC 107571", "accession": "GCA_016863355.1", "taxid": 763782, "species_taxid": 763782, "relation_to_type": "type", "validated": true, "ani": 74.8986, "matched_fragments": 94, "total_fragments": 1260, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces sedi", "strain": "strain=JCM 16909", "accession": "GCA_006335015.1", "taxid": 555059, "species_taxid": 555059, "relation_to_type": "type", "validated": true, "ani": 74.754, "matched_fragments": 66, "total_fragments": 1260, "ani_threshold": 95, "status": "below_threshold" } 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"num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_016649525.1", "gtdb_species": "s__JAENXM01 sp016649525", "ani": 76.3443, "matched_fragments": 122, "total_fragments": 1260, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Geothermincolia;o__Fen-727;f__Anoxymicrobiaceae;g__JAENXM01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_013178005.1", "gtdb_species": "s__Solincola_B sp013178005", "ani": 75.8836, "matched_fragments": 108, "total_fragments": 1260, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Geothermincolia;o__Geothermincolales;f__RBG-13-55-18;g__Solincola_B", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { 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"f__Anoxymicrobiaceae", "g__JAHJCO01", "s__JAHJCO01 sp018831265", "Bacteria", "Actinomycetota", "Geothermincolia", "Fen-727", "Anoxymicrobiaceae", "JAHJCO01", "JAHJCO01", "sp018831265" ], "_meo": [ { "id": "MEO_0000366", "label": "ground water" } ], "quality": 4, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }