{
    "type": "genome",
    "identifier": "GCA_018882685.1",
    "organism": "Burkholderiaceae bacterium",
    "title": "Burkholderiaceae bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Instituto de Quimica",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_018882685.1",
        "bioproject": "PRJNA369078",
        "biosample": "SAMN11867330",
        "wgs_master": "VFFC00000000.1",
        "refseq_category": "na",
        "taxid": "2030806",
        "species_taxid": "2030806",
        "organism_name": "Burkholderiaceae bacterium",
        "infraspecific_name": "",
        "isolate": "ZLKRG40",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/06/14",
        "asm_name": "ASM1888268v1",
        "submitter": "Instituto de Quimica",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/882/685/GCA_018882685.1_ASM1888268v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-06-14",
    "dateModified": "2021-06-14",
    "datePublished": "2021-06-14",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Burkholderiaceae bacterium"
        ],
        "sample_taxid": [
            "2030806"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Brazil: Sao Paulo Zoo"
        ],
        "sample_host_location_id": [],
        "data_size": "0.937 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 4.63,
        "strain_heterogeneity": 50.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3225509",
        "Number of Sequences": "523",
        "Longest Sequences (bp)": "77713",
        "N50 (bp)": "17973",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "53.3",
        "Number of CDSs": "2709",
        "Average Protein Length": "318.4",
        "Coding Ratio (%)": "80.2",
        "Number of rRNAs": "2",
        "Number of tRNAs": "55",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 4.63,
            "strain_heterogeneity": 50.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_900299025.1",
                "gtdb_species": "s__UBA3064 sp005787245",
                "ani": 98.882,
                "matched_fragments": 747,
                "total_fragments": 887,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__UBA3064",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.97",
                "min_intra_species_ani": "98.30",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.84",
                "num_clustered_genomes": 12,
                "status": "conclusive"
            },
            {
                "accession": "GCA_016868095.1",
                "gtdb_species": "s__UBA3064 sp016868095",
                "ani": 93.1538,
                "matched_fragments": 588,
                "total_fragments": 887,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__UBA3064",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002359635.1",
                "gtdb_species": "s__UBA3064 sp002359635",
                "ani": 79.5743,
                "matched_fragments": 360,
                "total_fragments": 887,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__UBA3064",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.69",
                "min_intra_species_ani": "99.55",
                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.78",
                "num_clustered_genomes": 24,
                "status": "-"
            },
            {
                "accession": "GCA_002342365.1",
                "gtdb_species": "s__UBA3064 sp002342365",
                "ani": 77.0786,
                "matched_fragments": 212,
                "total_fragments": 887,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__UBA3064",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.81",
                "min_intra_species_ani": "99.60",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.90",
                "num_clustered_genomes": 39,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.267,
        "cell_length": 0.119,
        "doubling_h": -0.007,
        "growth_tmp": 30.563,
        "optimum_tmp": 30.641,
        "optimum_ph": 6.554,
        "genome_size": 6983573.911,
        "gc_content": 63.546,
        "coding_genes": 5983.195,
        "rRNA16S_genes": 4.699,
        "tRNA_genes": 62.266,
        "gram_stain": 0.0,
        "sporulation": 0.026,
        "motility": 0.693,
        "range_salinity": 0.222,
        "facultative_respiration": 0.072,
        "anaerobic_respiration": 0.032,
        "aerobic_respiration": 0.895,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 0.967,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.021,
        "vibrio_cell_shape": 0.01,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__Burkholderiales",
        "f__Burkholderiaceae",
        "g__UBA3064",
        "s__UBA3064 sp005787245"
    ],
    "_genome_taxon": [
        "Burkholderiaceae",
        "bacterium",
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Gammaproteobacteria",
        "o__Burkholderiales",
        "f__Burkholderiaceae",
        "g__UBA3064",
        "s__UBA3064 sp005787245",
        "Bacteria",
        "Pseudomonadota",
        "Gammaproteobacteria",
        "Burkholderiales",
        "Burkholderiaceae",
        "UBA3064",
        "UBA3064",
        "sp005787245"
    ],
    "_meo": [
        {
            "id": "MEO_0000737",
            "label": "lake water"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}