{
    "type": "genome",
    "identifier": "GCA_018883325.1",
    "organism": "Flavobacteriales bacterium",
    "title": "Flavobacteriales bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Instituto de Quimica",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_018883325.1",
        "bioproject": "PRJNA369078",
        "biosample": "SAMN11867308",
        "wgs_master": "VEQH00000000.1",
        "refseq_category": "na",
        "taxid": "2021391",
        "species_taxid": "2021391",
        "organism_name": "Flavobacteriales bacterium",
        "infraspecific_name": "",
        "isolate": "ZLKRG09",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/06/14",
        "asm_name": "ASM1888332v1",
        "submitter": "Instituto de Quimica",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/883/325/GCA_018883325.1_ASM1888332v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-06-14",
    "dateModified": "2021-06-14",
    "datePublished": "2021-06-14",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Flavobacteriales bacterium"
        ],
        "sample_taxid": [
            "2021391"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Brazil: Sao Paulo Zoo"
        ],
        "sample_host_location_id": [],
        "data_size": "1.136 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "4055964",
        "Number of Sequences": "139",
        "Longest Sequences (bp)": "169985",
        "N50 (bp)": "45588",
        "Gap Ratio (%)": "0.004931",
        "GCcontent (%)": "34.3",
        "Number of CDSs": "3379",
        "Average Protein Length": "351.7",
        "Coding Ratio (%)": "87.9",
        "Number of rRNAs": "0",
        "Number of tRNAs": "31",
        "Number of CRISPRs": "2"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Fluviicola taffensis",
                "strain": "strain=DSM 16823",
                "accession": "GCA_000194605.1",
                "taxid": 191579,
                "species_taxid": 191579,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.3636,
                "matched_fragments": 117,
                "total_fragments": 1279,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Lishizhenia tianjinensis",
                "strain": "strain=CGMCC 1.7005",
                "accession": "GCA_900116425.1",
                "taxid": 477690,
                "species_taxid": 477690,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.0386,
                "matched_fragments": 53,
                "total_fragments": 1279,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Flavobacterium cheniae",
                "strain": "strain=CGMCC 1.6844",
                "accession": "GCA_007830415.1",
                "taxid": 295428,
                "species_taxid": 295428,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.8343,
                "matched_fragments": 50,
                "total_fragments": 1279,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Flavobacterium cheniae",
                "strain": "strain=DSM 22462",
                "accession": "GCA_004363695.1",
                "taxid": 295428,
                "species_taxid": 295428,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.8301,
                "matched_fragments": 50,
                "total_fragments": 1279,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Flavobacterium channae",
                "strain": "strain=KSM-R2A30",
                "accession": "GCA_021172165.1",
                "taxid": 2897181,
                "species_taxid": 2897181,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.7132,
                "matched_fragments": 53,
                "total_fragments": 1279,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Brumimicrobium glaciale",
                "strain": "strain=IC156",
                "accession": "GCA_004152935.1",
                "taxid": 200475,
                "species_taxid": 200475,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.6712,
                "matched_fragments": 96,
                "total_fragments": 1279,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_018883325.1",
                "gtdb_species": "s__UBA952 sp018883325",
                "ani": 100.0,
                "matched_fragments": 1272,
                "total_fragments": 1279,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Crocinitomicaceae;g__UBA952",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCA_009926905.1",
                "gtdb_species": "s__UBA952 sp009926905",
                "ani": 79.6514,
                "matched_fragments": 323,
                "total_fragments": 1279,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Crocinitomicaceae;g__UBA952",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_903935095.1",
                "gtdb_species": "s__UBA952 sp903935095",
                "ani": 77.2648,
                "matched_fragments": 106,
                "total_fragments": 1279,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Crocinitomicaceae;g__UBA952",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.97",
                "min_intra_species_ani": "99.95",
                "mean_intra_species_af": "0.99",
                "min_intra_species_af": "0.98",
                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCA_017983465.1",
                "gtdb_species": "s__UBA952 sp017983465",
                "ani": 77.0601,
                "matched_fragments": 142,
                "total_fragments": 1279,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Crocinitomicaceae;g__UBA952",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.99",
                "min_intra_species_ani": "99.99",
                "mean_intra_species_af": "0.99",
                "min_intra_species_af": "0.99",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_016866415.1",
                "gtdb_species": "s__UBA952 sp016866415",
                "ani": 77.0406,
                "matched_fragments": 126,
                "total_fragments": 1279,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Crocinitomicaceae;g__UBA952",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017984635.1",
                "gtdb_species": "s__M0103 sp017984635",
                "ani": 76.9768,
                "matched_fragments": 124,
                "total_fragments": 1279,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Crocinitomicaceae;g__M0103",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_009926125.1",
                "gtdb_species": "s__UBA952 sp009926125",
                "ani": 76.9763,
                "matched_fragments": 87,
                "total_fragments": 1279,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Crocinitomicaceae;g__UBA952",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_903860985.1",
                "gtdb_species": "s__UBA952 sp903860985",
                "ani": 76.9483,
                "matched_fragments": 113,
                "total_fragments": 1279,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Crocinitomicaceae;g__UBA952",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.77",
                "min_intra_species_ani": "99.68",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.92",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_903945495.1",
                "gtdb_species": "s__M0103 sp903945495",
                "ani": 76.9441,
                "matched_fragments": 154,
                "total_fragments": 1279,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Crocinitomicaceae;g__M0103",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.87",
                "min_intra_species_ani": "99.80",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.92",
                "num_clustered_genomes": 6,
                "status": "-"
            },
            {
                "accession": "GCA_903930085.1",
                "gtdb_species": "s__M0103 sp903930085",
                "ani": 76.4989,
                "matched_fragments": 74,
                "total_fragments": 1279,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Crocinitomicaceae;g__M0103",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_903879765.1",
                "gtdb_species": "s__UBA952 sp903879765",
                "ani": 76.3868,
                "matched_fragments": 83,
                "total_fragments": 1279,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Crocinitomicaceae;g__UBA952",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000194605.1",
                "gtdb_species": "s__Fluviicola taffensis",
                "ani": 76.3636,
                "matched_fragments": 117,
                "total_fragments": 1279,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Crocinitomicaceae;g__Fluviicola",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002384725.1",
                "gtdb_species": "s__UBA2040 sp002384725",
                "ani": 76.1729,
                "matched_fragments": 53,
                "total_fragments": 1279,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Crocinitomicaceae;g__UBA2040",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.28",
                "min_intra_species_ani": "99.28",
                "mean_intra_species_af": "0.79",
                "min_intra_species_af": "0.79",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_903899795.1",
                "gtdb_species": "s__CAIUKX01 sp903899795",
                "ani": 76.1187,
                "matched_fragments": 63,
                "total_fragments": 1279,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Crocinitomicaceae;g__CAIUKX01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_903887095.1",
                "gtdb_species": "s__M0103 sp903887095",
                "ani": 76.0969,
                "matched_fragments": 60,
                "total_fragments": 1279,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Crocinitomicaceae;g__M0103",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_004152935.1",
                "gtdb_species": "s__Brumimicrobium glaciale",
                "ani": 75.6712,
                "matched_fragments": 96,
                "total_fragments": 1279,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Crocinitomicaceae;g__Brumimicrobium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.337,
        "cell_length": 0.308,
        "doubling_h": 1.285,
        "growth_tmp": 26.455,
        "optimum_tmp": 26.685,
        "optimum_ph": 7.271,
        "genome_size": 3861663.667,
        "gc_content": 35.517,
        "coding_genes": 2961.142,
        "rRNA16S_genes": 3.684,
        "tRNA_genes": 48.763,
        "gram_stain": 0.0,
        "sporulation": 0.007,
        "motility": 0.372,
        "range_salinity": 0.615,
        "facultative_respiration": 0.042,
        "anaerobic_respiration": 0.012,
        "aerobic_respiration": 0.945,
        "mesophilic_range_tmp": 0.898,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.101,
        "bacillus_cell_shape": 0.982,
        "coccus_cell_shape": 0.005,
        "filament_cell_shape": 0.002,
        "coccobacillus_cell_shape": 0.01,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Flavobacteriales",
        "f__Crocinitomicaceae",
        "g__UBA952",
        "s__UBA952 sp018883325"
    ],
    "_genome_taxon": [
        "Flavobacteriales",
        "bacterium",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Flavobacteriales",
        "f__Crocinitomicaceae",
        "g__UBA952",
        "s__UBA952 sp018883325",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Flavobacteriales",
        "Crocinitomicaceae",
        "UBA952",
        "UBA952",
        "sp018883325"
    ],
    "_meo": [
        {
            "id": "MEO_0000737",
            "label": "lake water"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}