{
    "type": "genome",
    "identifier": "GCA_018895755.1",
    "organism": "Euryarchaeota archaeon",
    "title": "Euryarchaeota archaeon",
    "description": "derived from metagenome; fragmented assembly; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Department of Ecology and Genetics, Limnology and Science for Life Laboratory, Uppsala University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_018895755.1",
        "bioproject": "PRJNA627556",
        "biosample": "SAMN19297659",
        "wgs_master": "JAHIOA000000000.1",
        "refseq_category": "na",
        "taxid": "2026739",
        "species_taxid": "2026739",
        "organism_name": "Euryarchaeota archaeon",
        "infraspecific_name": "",
        "isolate": "KR13_S3.mb.107",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/06/16",
        "asm_name": "ASM1889575v1",
        "submitter": "Department of Ecology and Genetics, Limnology and Science for Life Laboratory, Uppsala University",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/895/755/GCA_018895755.1_ASM1889575v1",
        "excluded_from_refseq": "derived from metagenome; fragmented assembly; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-06-16",
    "dateModified": "2021-06-16",
    "datePublished": "2021-06-16",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Euryarchaeota archaeon"
        ],
        "sample_taxid": [
            "2026739"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Finland"
        ],
        "sample_host_location_id": [],
        "data_size": "0.342 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 61.2,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1184884",
        "Number of Sequences": "280",
        "Longest Sequences (bp)": "30898",
        "N50 (bp)": "4376",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "45.4",
        "Number of CDSs": "1060",
        "Average Protein Length": "248.6",
        "Coding Ratio (%)": "66.7",
        "Number of rRNAs": "0",
        "Number of tRNAs": "14",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 61.2,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_018899795.1",
                "gtdb_species": "s__Methanoperedens sp018899795",
                "ani": 96.8384,
                "matched_fragments": 173,
                "total_fragments": 238,
                "gtdb_taxonomy": "d__Archaea;p__Halobacteriota;c__Methanosarcinia;o__Methanosarcinales;f__Methanoperedenaceae;g__Methanoperedens",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.64",
                "min_intra_species_ani": "96.64",
                "mean_intra_species_af": "0.66",
                "min_intra_species_af": "0.66",
                "num_clustered_genomes": 2,
                "status": "conclusive"
            },
            {
                "accession": "GCA_018900975.1",
                "gtdb_species": "s__Methanoperedens sp018900975",
                "ani": 85.3933,
                "matched_fragments": 153,
                "total_fragments": 238,
                "gtdb_taxonomy": "d__Archaea;p__Halobacteriota;c__Methanosarcinia;o__Methanosarcinales;f__Methanoperedenaceae;g__Methanoperedens",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_012026835.1",
                "gtdb_species": "s__Methanoperedens sp012026835",
                "ani": 76.9911,
                "matched_fragments": 56,
                "total_fragments": 238,
                "gtdb_taxonomy": "d__Archaea;p__Halobacteriota;c__Methanosarcinia;o__Methanosarcinales;f__Methanoperedenaceae;g__Methanoperedens",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902386205.1",
                "gtdb_species": "s__Methanoperedens sp902386205",
                "ani": 76.9674,
                "matched_fragments": 63,
                "total_fragments": 238,
                "gtdb_taxonomy": "d__Archaea;p__Halobacteriota;c__Methanosarcinia;o__Methanosarcinales;f__Methanoperedenaceae;g__Methanoperedens",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Archaea",
        "p__Halobacteriota",
        "c__Methanosarcinia",
        "o__Methanosarcinales",
        "f__Methanoperedenaceae",
        "g__Methanoperedens",
        "s__Methanoperedens sp018899795"
    ],
    "_genome_taxon": [
        "Euryarchaeota",
        "archaeon",
        "d__Archaea",
        "p__Halobacteriota",
        "c__Methanosarcinia",
        "o__Methanosarcinales",
        "f__Methanoperedenaceae",
        "g__Methanoperedens",
        "s__Methanoperedens sp018899795",
        "Archaea",
        "Halobacteriota",
        "Methanosarcinia",
        "Methanosarcinales",
        "Methanoperedenaceae",
        "Methanoperedens",
        "Methanoperedens",
        "sp018899795"
    ],
    "_meo": [
        {
            "id": "MEO_0000366",
            "label": "ground water"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}