{
    "type": "genome",
    "identifier": "GCA_018898235.1",
    "organism": "Actinomycetota bacterium",
    "title": "Actinomycetota bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Department of Ecology and Genetics, Limnology and Science for Life Laboratory, Uppsala University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_018898235.1",
        "bioproject": "PRJNA627556",
        "biosample": "SAMN19297549",
        "wgs_master": "JAHIJU000000000.1",
        "refseq_category": "na",
        "taxid": "2900548",
        "species_taxid": "2900548",
        "organism_name": "Actinomycetota bacterium",
        "infraspecific_name": "",
        "isolate": "KR13_N1.mb.16",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/06/16",
        "asm_name": "ASM1889823v1",
        "submitter": "Department of Ecology and Genetics, Limnology and Science for Life Laboratory, Uppsala University",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/898/235/GCA_018898235.1_ASM1889823v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-06-16",
    "dateModified": "2021-06-16",
    "datePublished": "2021-06-16",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Actinomycetia bacterium"
        ],
        "sample_taxid": [
            "1883427"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Finland"
        ],
        "sample_host_location_id": [],
        "data_size": "0.871 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 57.01,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3247367",
        "Number of Sequences": "519",
        "Longest Sequences (bp)": "79161",
        "N50 (bp)": "7753",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "72.3",
        "Number of CDSs": "2622",
        "Average Protein Length": "307.0",
        "Coding Ratio (%)": "74.4",
        "Number of rRNAs": "1",
        "Number of tRNAs": "48",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Cellulomonas citrea",
                "strain": "strain=Ao-9",
                "accession": "GCA_009829685.1",
                "taxid": 1909423,
                "species_taxid": 1909423,
                "relation_to_type": "type",
                "validated": true,
                "ani": 85.2378,
                "matched_fragments": 547,
                "total_fragments": 813,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulomonas soli",
                "strain": "strain=DSM 24484",
                "accession": "GCA_013409305.1",
                "taxid": 931535,
                "species_taxid": 931535,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.3797,
                "matched_fragments": 382,
                "total_fragments": 813,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulomonas rhizosphaerae",
                "strain": "strain=NEAU-TCZ24",
                "accession": "GCA_003470205.1",
                "taxid": 2293719,
                "species_taxid": 2293719,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.1852,
                "matched_fragments": 301,
                "total_fragments": 813,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulomonas iranensis",
                "strain": "strain=NBRC 101100",
                "accession": "GCA_001552375.1",
                "taxid": 76862,
                "species_taxid": 76862,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.1424,
                "matched_fragments": 338,
                "total_fragments": 813,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulomonas palmilytica",
                "strain": "strain=EW123",
                "accession": "GCA_021590045.1",
                "taxid": 2608402,
                "species_taxid": 2608402,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.1298,
                "matched_fragments": 327,
                "total_fragments": 813,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulomonas gilvus",
                "strain": "strain=ATCC 13127",
                "accession": "GCA_000218545.1",
                "taxid": 11,
                "species_taxid": 11,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.1048,
                "matched_fragments": 325,
                "total_fragments": 813,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulomonas fulva",
                "strain": "strain=DKR-3",
                "accession": "GCA_018531375.1",
                "taxid": 2835530,
                "species_taxid": 2835530,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.0704,
                "matched_fragments": 323,
                "total_fragments": 813,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulomonas massiliensis",
                "strain": "strain=JC225",
                "accession": "GCA_000312005.1",
                "taxid": 1465811,
                "species_taxid": 1465811,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.0679,
                "matched_fragments": 341,
                "total_fragments": 813,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulomonas shaoxiangyii",
                "strain": "strain=Z28",
                "accession": "GCA_004798685.1",
                "taxid": 2566013,
                "species_taxid": 2566013,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.0626,
                "matched_fragments": 332,
                "total_fragments": 813,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulomonas xylanilytica",
                "strain": "strain=NBRC 101102",
                "accession": "GCA_007989805.1",
                "taxid": 233583,
                "species_taxid": 233583,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.0498,
                "matched_fragments": 314,
                "total_fragments": 813,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulomonas terrae",
                "strain": "strain=NBRC 100819",
                "accession": "GCA_007990265.1",
                "taxid": 311234,
                "species_taxid": 311234,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.0352,
                "matched_fragments": 321,
                "total_fragments": 813,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulomonas avistercoris",
                "strain": "strain=Sa3CUA2",
                "accession": "GCA_014836445.1",
                "taxid": 2762242,
                "species_taxid": 2762242,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.0281,
                "matched_fragments": 327,
                "total_fragments": 813,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulomonas fimi",
                "strain": "strain=NCTC7547",
                "accession": "GCA_900637695.1",
                "taxid": 1708,
                "species_taxid": 1708,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.9999,
                "matched_fragments": 338,
                "total_fragments": 813,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulomonas flavigena",
                "strain": "strain=DSM 20109",
                "accession": "GCA_000092865.1",
                "taxid": 1711,
                "species_taxid": 1711,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.9981,
                "matched_fragments": 327,
                "total_fragments": 813,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulomonas fimi",
                "strain": "strain=ATCC 484",
                "accession": "GCA_000212695.1",
                "taxid": 1708,
                "species_taxid": 1708,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.9769,
                "matched_fragments": 346,
                "total_fragments": 813,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulomonas gelida",
                "strain": "strain=JCM 1490",
                "accession": "GCA_014647015.1",
                "taxid": 1712,
                "species_taxid": 1712,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.96,
                "matched_fragments": 317,
                "total_fragments": 813,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulomonas gelida",
                "strain": "strain=NBRC 3748",
                "accession": "GCA_006538725.1",
                "taxid": 1712,
                "species_taxid": 1712,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.9144,
                "matched_fragments": 321,
                "total_fragments": 813,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulomonas hominis",
                "strain": "strain=NBRC 16055",
                "accession": "GCA_007989225.1",
                "taxid": 156981,
                "species_taxid": 156981,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 77.8665,
                "matched_fragments": 350,
                "total_fragments": 813,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulomonas telluris",
                "strain": "strain=CPCC 204705",
                "accession": "GCA_004886325.1",
                "taxid": 2306636,
                "species_taxid": 2306636,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.8178,
                "matched_fragments": 341,
                "total_fragments": 813,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cellulomonas hominis",
                "strain": "strain=DSM 9581",
                "accession": "GCA_014201095.1",
                "taxid": 156981,
                "species_taxid": 156981,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 77.7697,
                "matched_fragments": 367,
                "total_fragments": 813,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Actinotalea subterranea",
                "strain": "strain=HO-Ch2",
                "accession": "GCA_008364845.1",
                "taxid": 2607497,
                "species_taxid": 2607497,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.4334,
                "matched_fragments": 283,
                "total_fragments": 813,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Oerskovia douganii",
                "strain": "strain=Sa1BUA8",
                "accession": "GCA_015142735.1",
                "taxid": 2762210,
                "species_taxid": 2762210,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.9614,
                "matched_fragments": 254,
                "total_fragments": 813,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 57.01,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_018898235.1",
                "gtdb_species": "s__Cellulomonas sp018898235",
                "ani": 100.0,
                "matched_fragments": 800,
                "total_fragments": 813,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Cellulomonadaceae;g__Cellulomonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "conclusive"
            },
            {
                "accession": "GCF_009829685.1",
                "gtdb_species": "s__Cellulomonas citrea",
                "ani": 85.165,
                "matched_fragments": 551,
                "total_fragments": 813,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Cellulomonadaceae;g__Cellulomonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_001898185.1",
                "gtdb_species": "s__Cellulomonas sp001898185",
                "ani": 78.5891,
                "matched_fragments": 361,
                "total_fragments": 813,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Cellulomonadaceae;g__Cellulomonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.19",
                "min_intra_species_ani": "95.19",
                "mean_intra_species_af": "0.96",
                "min_intra_species_af": "0.96",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_009777345.1",
                "gtdb_species": "s__Cellulomonas sp009777345",
                "ani": 78.3782,
                "matched_fragments": 245,
                "total_fragments": 813,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Cellulomonadaceae;g__Cellulomonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_009785115.1",
                "gtdb_species": "s__Cellulomonas sp009785115",
                "ani": 78.3307,
                "matched_fragments": 235,
                "total_fragments": 813,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Cellulomonadaceae;g__Cellulomonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_016862675.1",
                "gtdb_species": "s__Cellulomonas chitinilytica",
                "ani": 78.2416,
                "matched_fragments": 337,
                "total_fragments": 813,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Cellulomonadaceae;g__Cellulomonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_001552375.1",
                "gtdb_species": "s__Cellulomonas iranensis",
                "ani": 78.1023,
                "matched_fragments": 341,
                "total_fragments": 813,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Cellulomonadaceae;g__Cellulomonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.21",
                "min_intra_species_ani": "97.89",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.88",
                "num_clustered_genomes": 6,
                "status": "-"
            },
            {
                "accession": "GCF_000218545.1",
                "gtdb_species": "s__Cellulomonas gilvus",
                "ani": 78.0937,
                "matched_fragments": 326,
                "total_fragments": 813,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Cellulomonadaceae;g__Cellulomonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017744555.1",
                "gtdb_species": "s__Cellulomonas sp017744555",
                "ani": 78.0261,
                "matched_fragments": 332,
                "total_fragments": 813,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Cellulomonadaceae;g__Cellulomonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_001424125.1",
                "gtdb_species": "s__Cellulomonas sp001424125",
                "ani": 77.9878,
                "matched_fragments": 310,
                "total_fragments": 813,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Cellulomonadaceae;g__Cellulomonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000212695.1",
                "gtdb_species": "s__Cellulomonas fimi",
                "ani": 77.9353,
                "matched_fragments": 350,
                "total_fragments": 813,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Cellulomonadaceae;g__Cellulomonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "100.00",
                "min_intra_species_ani": "99.99",
                "mean_intra_species_af": "1.00",
                "min_intra_species_af": "1.00",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCF_009720485.1",
                "gtdb_species": "s__Cellulomonas sp009720485",
                "ani": 77.9265,
                "matched_fragments": 348,
                "total_fragments": 813,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Cellulomonadaceae;g__Cellulomonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_901521055.1",
                "gtdb_species": "s__Cellulomonas hominis_C",
                "ani": 77.8867,
                "matched_fragments": 331,
                "total_fragments": 813,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Cellulomonadaceae;g__Cellulomonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Actinomycetota",
        "c__Actinomycetes",
        "o__Actinomycetales",
        "f__Cellulomonadaceae",
        "g__Cellulomonas",
        "s__Cellulomonas sp018898235"
    ],
    "_genome_taxon": [
        "Actinomycetota",
        "bacterium",
        "d__Bacteria",
        "p__Actinomycetota",
        "c__Actinomycetes",
        "o__Actinomycetales",
        "f__Cellulomonadaceae",
        "g__Cellulomonas",
        "s__Cellulomonas sp018898235",
        "Bacteria",
        "Actinomycetota",
        "Actinomycetes",
        "Actinomycetales",
        "Cellulomonadaceae",
        "Cellulomonas",
        "Cellulomonas",
        "sp018898235"
    ],
    "_meo": [
        {
            "id": "MEO_0000366",
            "label": "ground water"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}