{
    "type": "genome",
    "identifier": "GCA_018899285.1",
    "organism": "Candidatus Thermoplasmatota archaeon",
    "title": "Candidatus Thermoplasmatota archaeon",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Department of Ecology and Genetics, Limnology and Science for Life Laboratory, Uppsala University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_018899285.1",
        "bioproject": "PRJNA627556",
        "biosample": "SAMN19297517",
        "wgs_master": "JAHIIO000000000.1",
        "refseq_category": "na",
        "taxid": "2806419",
        "species_taxid": "2806419",
        "organism_name": "Candidatus Thermoplasmatota archaeon",
        "infraspecific_name": "",
        "isolate": "KR11_S3.mb.43",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/06/16",
        "asm_name": "ASM1889928v1",
        "submitter": "Department of Ecology and Genetics, Limnology and Science for Life Laboratory, Uppsala University",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/899/285/GCA_018899285.1_ASM1889928v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-06-16",
    "dateModified": "2021-06-16",
    "datePublished": "2021-06-16",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Candidatus Thermoplasmatota archaeon"
        ],
        "sample_taxid": [
            "2806419"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Finland"
        ],
        "sample_host_location_id": [],
        "data_size": "0.696 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 87.5,
        "contamination": 4.17,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2427598",
        "Number of Sequences": "128",
        "Longest Sequences (bp)": "103765",
        "N50 (bp)": "28457",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "49.5",
        "Number of CDSs": "2034",
        "Average Protein Length": "335.0",
        "Coding Ratio (%)": "84.2",
        "Number of rRNAs": "3",
        "Number of tRNAs": "24",
        "Number of CRISPRs": "2"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 87.5,
            "contamination": 4.17,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_013791785.1",
                "gtdb_species": "s__UBA147 sp013791785",
                "ani": 99.9424,
                "matched_fragments": 716,
                "total_fragments": 741,
                "gtdb_taxonomy": "d__Archaea;p__Thermoplasmatota;c__Thermoplasmata;o__SG8-5;f__SG8-5;g__UBA147",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.90",
                "min_intra_species_ani": "99.84",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.93",
                "num_clustered_genomes": 5,
                "status": "conclusive"
            },
            {
                "accession": "GCA_002499085.1",
                "gtdb_species": "s__UBA147 sp002499085",
                "ani": 77.266,
                "matched_fragments": 129,
                "total_fragments": 741,
                "gtdb_taxonomy": "d__Archaea;p__Thermoplasmatota;c__Thermoplasmata;o__SG8-5;f__SG8-5;g__UBA147",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.43",
                "min_intra_species_ani": "99.43",
                "mean_intra_species_af": "0.72",
                "min_intra_species_af": "0.72",
                "num_clustered_genomes": 2,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Archaea",
        "p__Thermoplasmatota",
        "c__Thermoplasmata",
        "o__SG8-5",
        "f__SG8-5",
        "g__UBA147",
        "s__UBA147 sp013791785"
    ],
    "_genome_taxon": [
        "Candidatus",
        "Thermoplasmatota",
        "archaeon",
        "d__Archaea",
        "p__Thermoplasmatota",
        "c__Thermoplasmata",
        "o__SG8-5",
        "f__SG8-5",
        "g__UBA147",
        "s__UBA147 sp013791785",
        "Archaea",
        "Thermoplasmatota",
        "Thermoplasmata",
        "SG8-5",
        "SG8-5",
        "UBA147",
        "UBA147",
        "sp013791785"
    ],
    "_meo": [
        {
            "id": "MEO_0000366",
            "label": "ground water"
        }
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}