{
    "type": "genome",
    "identifier": "GCA_018970365.1",
    "organism": "Acidobacteriota bacterium",
    "title": "Acidobacteriota bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Sun Yat-sen University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_018970365.1",
        "bioproject": "PRJNA675967",
        "biosample": "SAMN16745368",
        "wgs_master": "JAGWWL000000000.1",
        "refseq_category": "na",
        "taxid": "1978231",
        "species_taxid": "1978231",
        "organism_name": "Acidobacteriota bacterium",
        "infraspecific_name": "",
        "isolate": "REEB442",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/06/21",
        "asm_name": "ASM1897036v1",
        "submitter": "Sun Yat-sen University",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/970/365/GCA_018970365.1_ASM1897036v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-06-21",
    "dateModified": "2021-06-21",
    "datePublished": "2021-06-21",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Acidobacteriota bacterium"
        ],
        "sample_taxid": [
            "1978231"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China:Jiangxi"
        ],
        "sample_host_location_id": [],
        "data_size": "0.366 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 83.33,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1307995",
        "Number of Sequences": "74",
        "Longest Sequences (bp)": "79561",
        "N50 (bp)": "28637",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "61.6",
        "Number of CDSs": "1258",
        "Average Protein Length": "310.4",
        "Coding Ratio (%)": "89.6",
        "Number of rRNAs": "1",
        "Number of tRNAs": "31",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Desertimonas flava",
                "strain": "strain=SYSU D60003",
                "accession": "GCA_003426815.1",
                "taxid": 2064846,
                "species_taxid": 2064846,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.5228,
                "matched_fragments": 55,
                "total_fragments": 396,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 83.33,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_005793785.1",
                "gtdb_species": "s__F1-60-MAGs027 sp005793785",
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                "matched_fragments": 294,
                "total_fragments": 396,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__Ilumatobacteraceae;g__F1-60-MAGs027",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.94",
                "min_intra_species_ani": "98.60",
                "mean_intra_species_af": "0.81",
                "min_intra_species_af": "0.74",
                "num_clustered_genomes": 4,
                "status": "conclusive"
            },
            {
                "accession": "GCA_005793215.1",
                "gtdb_species": "s__F1-60-MAGs027 sp005793215",
                "ani": 79.3084,
                "matched_fragments": 186,
                "total_fragments": 396,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__Ilumatobacteraceae;g__F1-60-MAGs027",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.97",
                "min_intra_species_ani": "98.30",
                "mean_intra_species_af": "0.86",
                "min_intra_species_af": "0.85",
                "num_clustered_genomes": 4,
                "status": "-"
            },
            {
                "accession": "GCA_017856115.1",
                "gtdb_species": "s__F1-60-MAGs027 sp017856115",
                "ani": 79.2217,
                "matched_fragments": 218,
                "total_fragments": 396,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__Ilumatobacteraceae;g__F1-60-MAGs027",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016870295.1",
                "gtdb_species": "s__F1-60-MAGs027 sp016870295",
                "ani": 78.8353,
                "matched_fragments": 128,
                "total_fragments": 396,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__Ilumatobacteraceae;g__F1-60-MAGs027",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017853375.1",
                "gtdb_species": "s__F1-60-MAGs027 sp017853375",
                "ani": 78.7748,
                "matched_fragments": 186,
                "total_fragments": 396,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__Ilumatobacteraceae;g__F1-60-MAGs027",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016463775.1",
                "gtdb_species": "s__F1-60-MAGs027 sp016463775",
                "ani": 78.3422,
                "matched_fragments": 153,
                "total_fragments": 396,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__Ilumatobacteraceae;g__F1-60-MAGs027",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_009927665.1",
                "gtdb_species": "s__F1-60-MAGs027 sp009927665",
                "ani": 78.1774,
                "matched_fragments": 121,
                "total_fragments": 396,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__Ilumatobacteraceae;g__F1-60-MAGs027",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.21",
                "min_intra_species_ani": "99.09",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.94",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_010025655.1",
                "gtdb_species": "s__F1-60-MAGs027 sp010025655",
                "ani": 77.8093,
                "matched_fragments": 90,
                "total_fragments": 396,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__Ilumatobacteraceae;g__F1-60-MAGs027",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.35",
                "min_intra_species_ani": "98.13",
                "mean_intra_species_af": "0.74",
                "min_intra_species_af": "0.70",
                "num_clustered_genomes": 11,
                "status": "-"
            },
            {
                "accession": "GCA_018969685.1",
                "gtdb_species": "s__UBA3006 sp018969685",
                "ani": 77.015,
                "matched_fragments": 73,
                "total_fragments": 396,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Acidimicrobiia;o__Acidimicrobiales;f__Ilumatobacteraceae;g__UBA3006",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Actinomycetota",
        "c__Acidimicrobiia",
        "o__Acidimicrobiales",
        "f__Ilumatobacteraceae",
        "g__F1-60-MAGs027",
        "s__F1-60-MAGs027 sp005793785"
    ],
    "_genome_taxon": [
        "Acidobacteriota",
        "bacterium",
        "d__Bacteria",
        "p__Actinomycetota",
        "c__Acidimicrobiia",
        "o__Acidimicrobiales",
        "f__Ilumatobacteraceae",
        "g__F1-60-MAGs027",
        "s__F1-60-MAGs027 sp005793785",
        "Bacteria",
        "Actinomycetota",
        "Acidimicrobiia",
        "Acidimicrobiales",
        "Ilumatobacteraceae",
        "F1-60-MAGs027",
        "F1-60-MAGs027",
        "sp005793785"
    ],
    "_meo": [
        {
            "id": "MEO_0000034",
            "label": "acid mine drainage"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}