{ "type": "genome", "identifier": "GCA_018993165.1", "organism": "Flavobacterium sp.", "title": "Flavobacterium sp.", "description": "derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "Institute of Hydrobiology, Biology Centre CAS", "publication": [ {} ], "properties": { "assembly_accession": "GCA_018993165.1", "bioproject": "PRJNA718890", "biosample": "SAMN18578408", "wgs_master": "JAGKTA000000000.1", "refseq_category": "na", "taxid": "239", "species_taxid": "239", "organism_name": "Flavobacterium sp.", "infraspecific_name": "", "isolate": "bin-7", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/06/23", "asm_name": "ASM1899316v1", "submitter": "Institute of Hydrobiology, Biology Centre CAS", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/993/165/GCA_018993165.1_ASM1899316v1", "excluded_from_refseq": "derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-06-23", "dateModified": "2021-06-23", "datePublished": "2021-06-23", "_annotation": { "sample_count": 1, "sample_organism": [ "Flavobacterium sp." ], "sample_taxid": [ "239" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Thailand" ], "sample_host_location_id": [], "data_size": "0.787 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 50.0, "contamination": 4.17, "strain_heterogeneity": 100.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "2770252", "Number of Sequences": "461", "Longest Sequences (bp)": "27384", "N50 (bp)": "6461", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "37.9", "Number of CDSs": "2137", "Average Protein Length": "307.2", "Coding Ratio (%)": "71.1", "Number of rRNAs": "0", "Number of tRNAs": "32", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Flavobacterium lindanitolerans", "strain": "strain=DSM 21886", "accession": "GCA_003663835.1", "taxid": 428988, "species_taxid": 428988, "relation_to_type": "type", "validated": true, "ani": 97.3855, "matched_fragments": 635, "total_fragments": 723, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Flavobacterium lindanitolerans", "strain": "strain=IP-10", "accession": "GCA_002846575.1", "taxid": 428988, "species_taxid": 428988, "relation_to_type": "type", "validated": true, "ani": 97.379, "matched_fragments": 633, "total_fragments": 723, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Flavobacterium microcysteis", "strain": "strain=MaA-Y11", "accession": "GCA_006385255.1", 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