{ "tc_result": [ { "organism_name": "Sedimenticola selenatireducens", "strain": "strain=DSM 17993", "accession": "GCA_000428045.1", "taxid": 191960, "species_taxid": 191960, "relation_to_type": "type", "validated": true, "ani": 78.5483, "matched_fragments": 140, "total_fragments": 1534, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thiolapillus brandeum", "strain": "strain=Hiromi 1", "accession": "GCA_000828615.1", "taxid": 1076588, "species_taxid": 1076588, "relation_to_type": "type", "validated": true, "ani": 77.7853, "matched_fragments": 62, "total_fragments": 1534, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thiohalocapsa marina", "strain": "strain=DSM 19078", "accession": "GCA_008632335.1", "taxid": 424902, "species_taxid": 424902, "relation_to_type": "type", "validated": true, "ani": 77.3027, "matched_fragments": 132, "total_fragments": 1534, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Marichromatium purpuratum", "strain": "strain=984", "accession": "GCA_000224005.3", "taxid": 37487, "species_taxid": 37487, "relation_to_type": "type", "validated": true, "ani": 77.2447, "matched_fragments": 138, "total_fragments": 1534, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thioalkalivibrio sulfidiphilus", "strain": "strain=HL-EbGR7", "accession": "GCA_000021985.1", "taxid": 1033854, "species_taxid": 1033854, "relation_to_type": "type", "validated": true, "ani": 77.2362, "matched_fragments": 106, "total_fragments": 1534, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Allochromatium tepidum", "strain": "strain=NZ", "accession": "GCA_018409545.1", "taxid": 553982, "species_taxid": 553982, "relation_to_type": "type", "validated": true, "ani": 77.0779, "matched_fragments": 93, "total_fragments": 1534, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sedimenticola thiotaurini", "strain": "strain=SIP-G1", "accession": "GCA_001007875.1", "taxid": 1543721, "species_taxid": 1543721, "relation_to_type": "type", "validated": true, "ani": 77.0401, "matched_fragments": 144, "total_fragments": 1534, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Marichromatium bheemlicum", "strain": "strain=DSM 18632", "accession": "GCA_012276755.1", "taxid": 365339, "species_taxid": 365339, "relation_to_type": "type", "validated": true, "ani": 76.9972, "matched_fragments": 112, "total_fragments": 1534, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thiocystis violacea", "strain": "strain=DSM 207", "accession": "GCA_016583575.1", "taxid": 13725, "species_taxid": 13725, "relation_to_type": "type", "validated": true, "ani": 76.9909, "matched_fragments": 115, "total_fragments": 1534, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sulfurivermis fontis", "strain": "strain=JG42", "accession": "GCA_004001245.1", "taxid": 1972068, "species_taxid": 1972068, "relation_to_type": "type", "validated": true, "ani": 76.9693, "matched_fragments": 114, "total_fragments": 1534, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thioalkalivibrio thiocyanodenitrificans", "strain": "strain=ARhD 1", "accession": "GCA_000378965.1", "taxid": 243063, "species_taxid": 243063, "relation_to_type": "type", "validated": true, "ani": 76.9448, "matched_fragments": 78, "total_fragments": 1534, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thiocapsa bogorovii", "strain": "strain=BBS", "accession": "GCA_021228795.1", "taxid": 521689, "species_taxid": 521689, "relation_to_type": "type", "validated": true, "ani": 76.9337, "matched_fragments": 96, "total_fragments": 1534, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thiocystis violascens", "strain": "strain=DSM 198", "accession": "GCA_000227745.3", "taxid": 73141, "species_taxid": 73141, "relation_to_type": "type", "validated": true, "ani": 76.8223, "matched_fragments": 100, "total_fragments": 1534, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thiohalobacter thiocyanaticus", "strain": "strain=Hrh1", "accession": "GCA_003932505.1", "taxid": 585455, "species_taxid": 585455, "relation_to_type": "type", "validated": true, "ani": 76.8111, "matched_fragments": 97, "total_fragments": 1534, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquisalimonas asiatica", "strain": "strain=CGMCC 1.6291", "accession": "GCA_900110585.1", "taxid": 406100, "species_taxid": 406100, "relation_to_type": "type", "validated": true, "ani": 76.7812, "matched_fragments": 52, "total_fragments": 1534, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thioflavicoccus mobilis", "strain": "strain=8321", "accession": "GCA_000327045.1", "taxid": 80679, "species_taxid": 80679, "relation_to_type": "type", "validated": true, "ani": 76.5802, "matched_fragments": 105, "total_fragments": 1534, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Methyloterricola oryzae", "strain": "strain=73a", "accession": "GCA_000934725.1", "taxid": 1495050, "species_taxid": 1495050, "relation_to_type": "type", "validated": true, "ani": 76.5356, "matched_fragments": 57, "total_fragments": 1534, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halochromatium roseum", "strain": "strain=DSM 18859", "accession": "GCA_016653315.1", "taxid": 391920, "species_taxid": 391920, "relation_to_type": "type", "validated": true, "ani": 76.4977, "matched_fragments": 94, "total_fragments": 1534, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas aerodenitrificans", "strain": "strain=MCCC 1A11058", "accession": "GCA_021404405.1", "taxid": 2733483, "species_taxid": 2733483, "relation_to_type": "type", "validated": true, "ani": 76.4736, "matched_fragments": 62, "total_fragments": 1534, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Plasticicumulans lactativorans", "strain": "strain=DSM 25287", "accession": "GCA_004341245.1", "taxid": 1133106, "species_taxid": 1133106, "relation_to_type": "type", "validated": true, "ani": 76.3687, "matched_fragments": 69, "total_fragments": 1534, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas cavernicola", "strain": "strain=K1S02-6", "accession": "GCA_003596405.1", "taxid": 2320866, "species_taxid": 2320866, "relation_to_type": "type", "validated": true, "ani": 76.3229, "matched_fragments": 51, "total_fragments": 1534, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas maumuensis", "strain": "strain=COW77", "accession": "GCA_019139675.1", "taxid": 2842354, "species_taxid": 2842354, "relation_to_type": "type", "validated": true, "ani": 76.2059, "matched_fragments": 55, "total_fragments": 1534, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas sulfidivorans", "strain": "strain=MCCC 1A13718", "accession": "GCA_017868935.1", "taxid": 2733488, "species_taxid": 2733488, "relation_to_type": "type", "validated": true, "ani": 76.1218, "matched_fragments": 61, "total_fragments": 1534, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas delhiensis", "strain": "strain=CCM 7361", "accession": "GCA_900099945.1", "taxid": 366289, "species_taxid": 366289, "relation_to_type": "type", "validated": true, "ani": 76.1015, "matched_fragments": 71, "total_fragments": 1534, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Natronocella acetinitrilica", "strain": "strain=ANL 6-2", "accession": "GCA_024170285.1", "taxid": 414046, "species_taxid": 414046, "relation_to_type": "type", "validated": true, "ani": 75.7809, "matched_fragments": 54, "total_fragments": 1534, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas insulae", "strain": "strain=UL073", "accession": "GCA_016901015.1", "taxid": 2809017, "species_taxid": 2809017, "relation_to_type": "type", "validated": true, "ani": 75.5327, "matched_fragments": 63, "total_fragments": 1534, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas faucium", "strain": "strain=BML-PP048", "accession": "GCA_021602585.1", "taxid": 2740518, "species_taxid": 2740518, "relation_to_type": "type", "validated": true, "ani": 75.4795, "matched_fragments": 56, "total_fragments": 1534, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas faucium", "strain": "strain=BML-PP048", "accession": "GCA_013373935.1", "taxid": 2740518, "species_taxid": 2740518, "relation_to_type": "type", "validated": true, "ani": 75.4201, "matched_fragments": 54, "total_fragments": 1534, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_003094535.1", "gtdb_species": "s__Thiodiazotropha sp003094535", "ani": 99.628, "matched_fragments": 1285, "total_fragments": 1534, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Sedimenticolaceae;g__Thiodiazotropha", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.75", "min_intra_species_ani": "99.58", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.90", "num_clustered_genomes": 13, "status": "conclusive" }, { "accession": "GCA_003058495.1", "gtdb_species": "s__Thiodiazotropha sp003058495", "ani": 91.0222, "matched_fragments": 1266, "total_fragments": 1534, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Sedimenticolaceae;g__Thiodiazotropha", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.61", "min_intra_species_ani": "99.54", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.95", "num_clustered_genomes": 6, "status": "-" }, { "accession": "GCA_003094555.1", "gtdb_species": "s__Thiodiazotropha sp003094555", "ani": 81.075, "matched_fragments": 808, "total_fragments": 1534, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Sedimenticolaceae;g__Thiodiazotropha", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.74", "min_intra_species_ani": "99.69", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.89", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCA_003058525.1", "gtdb_species": "s__Thiodiazotropha sp003058525", "ani": 80.6187, "matched_fragments": 840, "total_fragments": 1534, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Sedimenticolaceae;g__Thiodiazotropha", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.55", "min_intra_species_ani": "99.55", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.93", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_001715975.1", "gtdb_species": "s__Thiodiazotropha endolucinida_A", "ani": 80.5599, "matched_fragments": 840, "total_fragments": 1534, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Sedimenticolaceae;g__Thiodiazotropha", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.81", "min_intra_species_ani": "98.44", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.86", "num_clustered_genomes": 30, "status": "-" }, { "accession": "GCA_019100305.1", "gtdb_species": "s__Thiodiazotropha sp019100305", "ani": 78.6246, "matched_fragments": 304, "total_fragments": 1534, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Sedimenticolaceae;g__Thiodiazotropha", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_016842065.1", "gtdb_species": "s__Thiodiazotropha sp016842065", "ani": 78.0953, "matched_fragments": 385, "total_fragments": 1534, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Sedimenticolaceae;g__Thiodiazotropha", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001708965.1", "gtdb_species": "s__Thiodiazotropha endoloripes", "ani": 77.8609, "matched_fragments": 374, "total_fragments": 1534, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Sedimenticolaceae;g__Thiodiazotropha", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.62", "min_intra_species_ani": "99.43", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.94", "num_clustered_genomes": 9, "status": "-" }, { "accession": "GCA_016756855.1", "gtdb_species": "s__QGON01 sp016756855", "ani": 77.2318, "matched_fragments": 178, "total_fragments": 1534, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Chromatiales;f__Sedimenticolaceae;g__QGON01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.16", "min_intra_species_ani": "98.34", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.90", "num_clustered_genomes": 3, "status": "-" } ] }