{
    "type": "genome",
    "identifier": "GCA_019307595.1",
    "organism": "Deltaproteobacteria bacterium",
    "title": "Deltaproteobacteria bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "The University of Texas at Austin",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_019307595.1",
        "bioproject": "PRJNA688516",
        "biosample": "SAMN17179438",
        "wgs_master": "JAFDJJ000000000.1",
        "refseq_category": "na",
        "taxid": "2026735",
        "species_taxid": "2026735",
        "organism_name": "Deltaproteobacteria bacterium",
        "infraspecific_name": "",
        "isolate": "Meg22_24_Bin_161",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/07/21",
        "asm_name": "ASM1930759v1",
        "submitter": "The University of Texas at Austin",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/019/307/595/GCA_019307595.1_ASM1930759v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-07-21",
    "dateModified": "2021-07-21",
    "datePublished": "2021-07-21",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Deltaproteobacteria bacterium"
        ],
        "sample_taxid": [
            "2026735"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA: Guaymas Basin, Gulf of California"
        ],
        "sample_host_location_id": [],
        "data_size": "0.855 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 89.64,
        "contamination": 8.33,
        "strain_heterogeneity": 75.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3014705",
        "Number of Sequences": "456",
        "Longest Sequences (bp)": "81793",
        "N50 (bp)": "8606",
        "Gap Ratio (%)": "0.005009",
        "GCcontent (%)": "62.7",
        "Number of CDSs": "2555",
        "Average Protein Length": "305.8",
        "Coding Ratio (%)": "77.7",
        "Number of rRNAs": "0",
        "Number of tRNAs": "16",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Sandaracinus amylolyticus",
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                "accession": "GCA_000737325.2",
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                "species_taxid": 927083,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 103,
                "total_fragments": 759,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Labilithrix luteola",
                "strain": "strain=DSM 27648",
                "accession": "GCA_001263205.1",
                "taxid": 1391654,
                "species_taxid": 1391654,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.5682,
                "matched_fragments": 55,
                "total_fragments": 759,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Polyangium aurulentum",
                "strain": "strain=SDU3-1",
                "accession": "GCA_005144635.2",
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                "species_taxid": 2567896,
                "relation_to_type": "type",
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                "ani": 75.0394,
                "matched_fragments": 57,
                "total_fragments": 759,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 8.33,
            "strain_heterogeneity": 75.0
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        "gtdb_result": [
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                "accession": "GCA_003647035.1",
                "gtdb_species": "s__SG8-38 sp003647035",
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                "total_fragments": 759,
                "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__SG8-38;g__SG8-38",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.70",
                "min_intra_species_ani": "96.70",
                "mean_intra_species_af": "0.74",
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                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_013002645.1",
                "gtdb_species": "s__SG8-38 sp013002645",
                "ani": 78.6719,
                "matched_fragments": 330,
                "total_fragments": 759,
                "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__SG8-38;g__SG8-38",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_004283055.1",
                "gtdb_species": "s__SG8-38 sp004283055",
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                "matched_fragments": 396,
                "total_fragments": 759,
                "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__SG8-38;g__SG8-38",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.78",
                "min_intra_species_ani": "99.72",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.90",
                "num_clustered_genomes": 8,
                "status": "-"
            },
            {
                "accession": "GCA_001303415.1",
                "gtdb_species": "s__SG8-38 sp001303415",
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                "matched_fragments": 283,
                "total_fragments": 759,
                "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__SG8-38;g__SG8-38",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016706685.1",
                "gtdb_species": "s__JADJJE01 sp016706685",
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                "matched_fragments": 73,
                "total_fragments": 759,
                "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__SG8-38;g__JADJJE01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.15",
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                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.90",
                "num_clustered_genomes": 7,
                "status": "-"
            },
            {
                "accession": "GCA_002320815.1",
                "gtdb_species": "s__UBA1660 sp002320815",
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                "matched_fragments": 82,
                "total_fragments": 759,
                "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__SG8-38;g__UBA1660",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.96",
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                "mean_intra_species_af": "0.96",
                "min_intra_species_af": "0.96",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_017644045.1",
                "gtdb_species": "s__UBA1660 sp017644045",
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                "matched_fragments": 95,
                "total_fragments": 759,
                "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__SG8-38;g__UBA1660",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000418325.1",
                "gtdb_species": "s__Sorangium cellulosum_D",
                "ani": 75.1902,
                "matched_fragments": 80,
                "total_fragments": 759,
                "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__Sorangium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.45",
                "min_intra_species_ani": "95.45",
                "mean_intra_species_af": "0.82",
                "min_intra_species_af": "0.82",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_002950945.1",
                "gtdb_species": "s__Sorangium cellulosum_E",
                "ani": 75.0526,
                "matched_fragments": 71,
                "total_fragments": 759,
                "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__Sorangium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Myxococcota",
        "c__Polyangia",
        "o__Polyangiales",
        "f__SG8-38",
        "g__SG8-38",
        "s__SG8-38 sp019313915"
    ],
    "_genome_taxon": [
        "Deltaproteobacteria",
        "bacterium",
        "d__Bacteria",
        "p__Myxococcota",
        "c__Polyangia",
        "o__Polyangiales",
        "f__SG8-38",
        "g__SG8-38",
        "s__SG8-38 sp019313915",
        "Bacteria",
        "Myxococcota",
        "Polyangia",
        "Polyangiales",
        "SG8-38",
        "SG8-38",
        "SG8-38",
        "sp019313915"
    ],
    "_meo": [
        {
            "id": "MEO_0000031",
            "label": "hydrothermal vent"
        },
        {
            "id": "MEO_0000066",
            "label": "sediment"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}