{
    "type": "genome",
    "identifier": "GCA_019310435.1",
    "organism": "Deltaproteobacteria bacterium",
    "title": "Deltaproteobacteria bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "The University of Texas at Austin",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_019310435.1",
        "bioproject": "PRJNA688516",
        "biosample": "SAMN17179306",
        "wgs_master": "JAFDEH000000000.1",
        "refseq_category": "na",
        "taxid": "2026735",
        "species_taxid": "2026735",
        "organism_name": "Deltaproteobacteria bacterium",
        "infraspecific_name": "",
        "isolate": "Meg19_46_Bin_105",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/07/21",
        "asm_name": "ASM1931043v1",
        "submitter": "The University of Texas at Austin",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/019/310/435/GCA_019310435.1_ASM1931043v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-07-21",
    "dateModified": "2021-07-21",
    "datePublished": "2021-07-21",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Deltaproteobacteria bacterium"
        ],
        "sample_taxid": [
            "2026735"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA: Guaymas Basin, Gulf of California"
        ],
        "sample_host_location_id": [],
        "data_size": "1.288 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 98.61,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "4698350",
        "Number of Sequences": "397",
        "Longest Sequences (bp)": "79596",
        "N50 (bp)": "18365",
        "Gap Ratio (%)": "0.001383",
        "GCcontent (%)": "68.6",
        "Number of CDSs": "4096",
        "Average Protein Length": "317.1",
        "Coding Ratio (%)": "82.9",
        "Number of rRNAs": "0",
        "Number of tRNAs": "59",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Vulgatibacter incomptus",
                "strain": "strain=DSM 27710",
                "accession": "GCA_001263175.1",
                "taxid": 1391653,
                "species_taxid": 1391653,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.4763,
                "matched_fragments": 102,
                "total_fragments": 1371,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Anaeromyxobacter dehalogenans",
                "strain": "strain=2CP-1",
                "accession": "GCA_000022145.1",
                "taxid": 161493,
                "species_taxid": 161493,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.224,
                "matched_fragments": 177,
                "total_fragments": 1371,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Shinella pollutisoli",
                "strain": "strain=KCTC 52677",
                "accession": "GCA_024609765.1",
                "taxid": 2250594,
                "species_taxid": 2250594,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.0557,
                "matched_fragments": 99,
                "total_fragments": 1371,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Thalassobaculum fulvum",
                "strain": "strain=KCTC 42651",
                "accession": "GCA_014652915.1",
                "taxid": 1633335,
                "species_taxid": 1633335,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.0154,
                "matched_fragments": 121,
                "total_fragments": 1371,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Roseivivax isoporae",
                "strain": "strain=LMG 25204",
                "accession": "GCA_000521865.1",
                "taxid": 591206,
                "species_taxid": 591206,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.0033,
                "matched_fragments": 92,
                "total_fragments": 1371,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pelagibius marinus",
                "strain": "strain=NBU2595",
                "accession": "GCA_014925385.1",
                "taxid": 2762760,
                "species_taxid": 2762760,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.9923,
                "matched_fragments": 79,
                "total_fragments": 1371,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Azospirillum thermophilum",
                "strain": "strain=CFH 70021",
                "accession": "GCA_003130795.1",
                "taxid": 2202148,
                "species_taxid": 2202148,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.962,
                "matched_fragments": 108,
                "total_fragments": 1371,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Haliangium ochraceum",
                "strain": "strain=DSM 14365",
                "accession": "GCA_000024805.1",
                "taxid": 80816,
                "species_taxid": 80816,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.9355,
                "matched_fragments": 162,
                "total_fragments": 1371,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Dokdonella fugitiva",
                "strain": "strain=A3",
                "accession": "GCA_004342425.1",
                "taxid": 328517,
                "species_taxid": 328517,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.9162,
                "matched_fragments": 93,
                "total_fragments": 1371,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Polyangium spumosum",
                "strain": "strain=DSM 14734",
                "accession": "GCA_009649845.1",
                "taxid": 889282,
                "species_taxid": 889282,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.9042,
                "matched_fragments": 175,
                "total_fragments": 1371,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Nannocystis exedens",
                "strain": "strain=ATCC 25963",
                "accession": "GCA_900112715.1",
                "taxid": 54,
                "species_taxid": 54,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.8964,
                "matched_fragments": 246,
                "total_fragments": 1371,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Nannocystis exedens",
                "strain": "strain=DSM 71",
                "accession": "GCA_002343915.1",
                "taxid": 54,
                "species_taxid": 54,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.885,
                "matched_fragments": 255,
                "total_fragments": 1371,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Polyangium fumosum",
                "strain": "strain=DSM 14668",
                "accession": "GCA_005144585.1",
                "taxid": 889272,
                "species_taxid": 889272,
                "relation_to_type": "neotype",
                "validated": true,
                "ani": 74.8586,
                "matched_fragments": 203,
                "total_fragments": 1371,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Kineococcus xinjiangensis",
                "strain": "strain=DSM 22857",
                "accession": "GCA_002934625.1",
                "taxid": 512762,
                "species_taxid": 512762,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.8396,
                "matched_fragments": 97,
                "total_fragments": 1371,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 98.61,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_002687015.1",
                "gtdb_species": "s__GCA-2687015 sp002687015",
                "ani": 77.1818,
                "matched_fragments": 260,
                "total_fragments": 1371,
                "gtdb_taxonomy": "d__Bacteria;p__Myxococcota_A;c__UBA9160;o__UBA9160;f__UBA6930;g__GCA-2687015",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016875395.1",
                "gtdb_species": "s__VGRF01 sp016875395",
                "ani": 76.8439,
                "matched_fragments": 234,
                "total_fragments": 1371,
                "gtdb_taxonomy": "d__Bacteria;p__Myxococcota_A;c__UBA9160;o__UBA9160;f__UBA6930;g__VGRF01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003576805.1",
                "gtdb_species": "s__PR03 sp003576805",
                "ani": 76.663,
                "matched_fragments": 349,
                "total_fragments": 1371,
                "gtdb_taxonomy": "d__Bacteria;p__Myxococcota_A;c__UBA9160;o__UBA9160;f__PR03;g__PR03",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_900696485.1",
                "gtdb_species": "s__CAADGG01 sp900696485",
                "ani": 76.5113,
                "matched_fragments": 224,
                "total_fragments": 1371,
                "gtdb_taxonomy": "d__Bacteria;p__Myxococcota_A;c__UBA9160;o__UBA9160;f__PR03;g__CAADGG01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.84",
                "min_intra_species_ani": "99.84",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.91",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_011055735.1",
                "gtdb_species": "s__DSOP01 sp011055735",
                "ani": 76.4782,
                "matched_fragments": 310,
                "total_fragments": 1371,
                "gtdb_taxonomy": "d__Bacteria;p__Myxococcota_A;c__UBA9160;o__UBA9160;f__UBA6930;g__DSOP01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002729515.1",
                "gtdb_species": "s__GCA-2729515 sp002729515",
                "ani": 76.3853,
                "matched_fragments": 190,
                "total_fragments": 1371,
                "gtdb_taxonomy": "d__Bacteria;p__Myxococcota_A;c__UBA9160;o__UBA9160;f__SMWR01;g__GCA-2729515",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016713665.1",
                "gtdb_species": "s__JADJOR01 sp016713665",
                "ani": 76.3182,
                "matched_fragments": 271,
                "total_fragments": 1371,
                "gtdb_taxonomy": "d__Bacteria;p__Myxococcota_A;c__UBA9160;o__UBA9160;f__UBA4427;g__JADJOR01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_013215605.1",
                "gtdb_species": "s__JABSQW01 sp013215605",
                "ani": 76.1842,
                "matched_fragments": 212,
                "total_fragments": 1371,
                "gtdb_taxonomy": "d__Bacteria;p__Myxococcota_A;c__UBA9160;o__UBA9160;f__SMWR01;g__JABSQW01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003220195.1",
                "gtdb_species": "s__AR8 sp003220195",
                "ani": 75.0701,
                "matched_fragments": 79,
                "total_fragments": 1371,
                "gtdb_taxonomy": "d__Bacteria;p__Methylomirabilota;c__Methylomirabilia;o__Rokubacteriales;f__CSP1-6;g__AR8",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003220615.1",
                "gtdb_species": "s__40CM-68-15 sp003220615",
                "ani": 75.0687,
                "matched_fragments": 95,
                "total_fragments": 1371,
                "gtdb_taxonomy": "d__Bacteria;p__Methylomirabilota;c__Methylomirabilia;o__Rokubacteriales;f__CSP1-6;g__40CM-68-15",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.09",
                "min_intra_species_ani": "97.89",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.88",
                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCA_016712565.1",
                "gtdb_species": "s__JADJQU01 sp016712565",
                "ani": 75.0268,
                "matched_fragments": 67,
                "total_fragments": 1371,
                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__UBA1135;o__UBA1135;f__GCA-002686595;g__JADJQU01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_003852895.1",
                "gtdb_species": "s__Albitalea terrae",
                "ani": 74.9839,
                "matched_fragments": 68,
                "total_fragments": 1371,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Albitalea",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016218785.1",
                "gtdb_species": "s__JACRCY01 sp016218785",
                "ani": 74.8178,
                "matched_fragments": 121,
                "total_fragments": 1371,
                "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__JACRCY01;f__JACRCY01;g__JACRCY01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Myxococcota_A",
        "c__UBA9160",
        "o__UBA9160",
        "f__JAFDDA01",
        "g__JAFDDA01",
        "s__JAFDDA01 sp019311105"
    ],
    "_genome_taxon": [
        "Deltaproteobacteria",
        "bacterium",
        "d__Bacteria",
        "p__Myxococcota_A",
        "c__UBA9160",
        "o__UBA9160",
        "f__JAFDDA01",
        "g__JAFDDA01",
        "s__JAFDDA01 sp019311105",
        "Bacteria",
        "Myxococcota",
        "A",
        "UBA9160",
        "UBA9160",
        "JAFDDA01",
        "JAFDDA01",
        "JAFDDA01",
        "sp019311105"
    ],
    "_meo": [
        {
            "id": "MEO_0000031",
            "label": "hydrothermal vent"
        },
        {
            "id": "MEO_0000066",
            "label": "sediment"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}