{ "tc_result": [ { "organism_name": "Usitatibacter rugosus", "strain": "strain=0125_3", "accession": "GCA_013003965.1", "taxid": 2732067, "species_taxid": 2732067, "relation_to_type": "type", "validated": true, "ani": 80.6135, "matched_fragments": 635, "total_fragments": 1357, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Usitatibacter palustris", "strain": "strain=Swamp67", "accession": "GCA_013003985.1", "taxid": 2732487, "species_taxid": 2732487, "relation_to_type": "type", "validated": true, "ani": 79.8848, "matched_fragments": 615, "total_fragments": 1357, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sulfurisoma sediminicola", "strain": "strain=DSM 26916", "accession": "GCA_003663955.1", "taxid": 1381557, "species_taxid": 1381557, "relation_to_type": "type", "validated": true, "ani": 77.6669, "matched_fragments": 266, "total_fragments": 1357, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sulfurisoma sediminicola", "strain": "strain=BSN1", "accession": "GCA_003865015.1", "taxid": 1381557, "species_taxid": 1381557, "relation_to_type": "type", "validated": true, "ani": 77.6459, "matched_fragments": 272, "total_fragments": 1357, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Azoarcus rhizosphaerae", "strain": "strain=CC-YHH848", "accession": "GCA_004801305.1", "taxid": 2565932, "species_taxid": 2565932, "relation_to_type": "type", "validated": true, "ani": 77.2229, "matched_fragments": 326, "total_fragments": 1357, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aromatoleum evansii", "strain": "strain=KB740", "accession": "GCA_012910805.1", "taxid": 59406, "species_taxid": 59406, "relation_to_type": "type", "validated": true, "ani": 76.8916, "matched_fragments": 289, "total_fragments": 1357, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Crenobacter luteus", "strain": "strain=DSM 27258", "accession": "GCA_004345725.1", "taxid": 1452487, "species_taxid": 1452487, "relation_to_type": "type", "validated": true, "ani": 76.7917, "matched_fragments": 260, "total_fragments": 1357, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Azohydromonas lata", "strain": "strain=NBRC 102462", "accession": "GCA_001571085.1", "taxid": 45677, "species_taxid": 45677, "relation_to_type": "type", "validated": true, "ani": 76.6534, "matched_fragments": 366, "total_fragments": 1357, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chitinimonas koreensis", "strain": "strain=DSM 17726", "accession": "GCA_000428465.1", "taxid": 356302, "species_taxid": 356302, "relation_to_type": "type", "validated": true, "ani": 76.6391, "matched_fragments": 349, "total_fragments": 1357, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rubrivivax gelatinosus", "strain": "strain=DSM 1709", "accession": "GCA_016583525.1", "taxid": 28068, "species_taxid": 28068, "relation_to_type": "suspected-type", "validated": true, "ani": 76.5287, "matched_fragments": 398, "total_fragments": 1357, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aromatoleum anaerobium", "strain": "strain=LuFRes1", "accession": "GCA_012910705.2", "taxid": 182180, "species_taxid": 182180, "relation_to_type": "type", "validated": true, "ani": 76.4786, "matched_fragments": 228, "total_fragments": 1357, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rubrivivax gelatinosus", "strain": "strain=DSM 1709", "accession": "GCA_004340905.1", "taxid": 28068, "species_taxid": 28068, "relation_to_type": "suspected-type", "validated": true, "ani": 76.4663, "matched_fragments": 406, "total_fragments": 1357, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Malikia granosa", "strain": "strain=P1", "accession": "GCA_002980595.1", "taxid": 263067, "species_taxid": 263067, "relation_to_type": "type", "validated": true, "ani": 76.4639, "matched_fragments": 226, "total_fragments": 1357, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aromatoleum petrolei", "strain": "strain=ToN1", "accession": "GCA_017894385.1", "taxid": 76116, "species_taxid": 76116, "relation_to_type": "type", "validated": true, "ani": 76.443, "matched_fragments": 270, "total_fragments": 1357, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aromatoleum petrolei", "strain": "strain=ToN1", "accession": "GCA_012910985.1", "taxid": 76116, "species_taxid": 76116, "relation_to_type": "type", "validated": true, "ani": 76.3865, "matched_fragments": 266, "total_fragments": 1357, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Fulvimonas soli", "strain": "strain=LMG 19981", "accession": "GCA_006352285.1", "taxid": 155197, "species_taxid": 155197, "relation_to_type": "type", "validated": true, "ani": 76.3334, "matched_fragments": 284, "total_fragments": 1357, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Fulvimonas soli", "strain": "strain=DSM 14263", "accession": "GCA_003148905.1", "taxid": 155197, "species_taxid": 155197, "relation_to_type": "type", "validated": true, "ani": 76.3215, "matched_fragments": 305, "total_fragments": 1357, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rugamonas brunnea", "strain": "strain=LX20W", "accession": "GCA_014042345.1", "taxid": 2758569, "species_taxid": 2758569, "relation_to_type": "type", "validated": true, "ani": 76.2784, "matched_fragments": 245, "total_fragments": 1357, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Burkholderia perseverans", "strain": "strain=INN12", "accession": "GCA_022870505.1", "taxid": 2615214, "species_taxid": 2615214, "relation_to_type": "type", "validated": true, "ani": 76.1145, "matched_fragments": 406, "total_fragments": 1357, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Propionivibrio dicarboxylicus", "strain": "strain=DSM 5885", "accession": "GCA_900099695.1", "taxid": 83767, "species_taxid": 83767, "relation_to_type": "type", "validated": true, "ani": 76.0439, "matched_fragments": 121, "total_fragments": 1357, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Halomonas smyrnensis", "strain": "strain=AAD6", "accession": "GCA_000265245.2", "taxid": 720605, "species_taxid": 720605, "relation_to_type": "type", "validated": true, "ani": 76.0357, "matched_fragments": 182, "total_fragments": 1357, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Duganella aceris", "strain": "strain=SAP-35", "accession": "GCA_011090165.1", "taxid": 2703883, "species_taxid": 2703883, "relation_to_type": "type", "validated": true, "ani": 75.9288, "matched_fragments": 247, "total_fragments": 1357, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Burkholderia mallei", "strain": "strain=ATCC 23344", "accession": "GCA_000011705.1", "taxid": 13373, "species_taxid": 13373, "relation_to_type": "type", "validated": true, "ani": 75.8878, "matched_fragments": 337, "total_fragments": 1357, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Burkholderia pseudomallei", "strain": "strain=ATCC 23343", "accession": "GCA_001182285.1", "taxid": 28450, "species_taxid": 28450, "relation_to_type": "type", "validated": true, "ani": 75.7496, "matched_fragments": 376, "total_fragments": 1357, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rivicola pingtungensis", "strain": "strain=DSM 29661", "accession": "GCA_003201855.1", "taxid": 1054498, "species_taxid": 1054498, "relation_to_type": "type", "validated": true, "ani": 75.6705, "matched_fragments": 109, "total_fragments": 1357, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Duganella dendranthematis", "strain": "strain=AF9R3", "accession": "GCA_012849375.1", "taxid": 2728021, "species_taxid": 2728021, "relation_to_type": "type", "validated": true, "ani": 75.652, "matched_fragments": 167, "total_fragments": 1357, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Solimonas terrae", "strain": "strain=KIS83-12", "accession": "GCA_011067135.1", "taxid": 1396819, "species_taxid": 1396819, "relation_to_type": "type", "validated": true, "ani": 75.1609, "matched_fragments": 133, "total_fragments": 1357, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 4.17, "strain_heterogeneity": 100.0 }, "gtdb_result": [ { "accession": "GCA_003105245.1", "gtdb_species": "s__FEB-7 sp003105245", "ani": 86.3954, "matched_fragments": 737, "total_fragments": 1357, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Usitatibacteraceae;g__FEB-7", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.57", "min_intra_species_ani": "99.57", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.92", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_011391275.1", "gtdb_species": "s__FEB-7 sp011391275", "ani": 85.694, "matched_fragments": 737, "total_fragments": 1357, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Usitatibacteraceae;g__FEB-7", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_016708825.1", "gtdb_species": "s__FEB-7 sp016708825", "ani": 83.8815, "matched_fragments": 826, "total_fragments": 1357, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Usitatibacteraceae;g__FEB-7", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_016720855.1", "gtdb_species": "s__FEB-7 sp016720855", "ani": 82.917, "matched_fragments": 848, "total_fragments": 1357, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Usitatibacteraceae;g__FEB-7", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_016709665.1", "gtdb_species": "s__FEB-7 sp016709665", "ani": 82.5203, "matched_fragments": 836, "total_fragments": 1357, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Usitatibacteraceae;g__FEB-7", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_016711875.1", "gtdb_species": "s__FEB-7 sp016711875", "ani": 82.1497, "matched_fragments": 838, "total_fragments": 1357, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Usitatibacteraceae;g__FEB-7", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_012274175.1", "gtdb_species": "s__Usitatibacter sp012274175", "ani": 80.3115, "matched_fragments": 427, "total_fragments": 1357, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Usitatibacteraceae;g__Usitatibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_001953215.1", "gtdb_species": "s__Usitatibacter sp001953215", "ani": 80.1718, "matched_fragments": 624, "total_fragments": 1357, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Usitatibacteraceae;g__Usitatibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_013003985.1", "gtdb_species": "s__Usitatibacter palustris", "ani": 79.8988, "matched_fragments": 613, "total_fragments": 1357, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Usitatibacteraceae;g__Usitatibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_017880705.1", "gtdb_species": "s__Usitatibacter sp017880705", "ani": 79.8335, "matched_fragments": 410, "total_fragments": 1357, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Usitatibacteraceae;g__Usitatibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_016861105.1", "gtdb_species": "s__VBCG01 sp016861105", "ani": 77.2257, "matched_fragments": 475, "total_fragments": 1357, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Casimicrobiaceae;g__VBCG01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }