{
    "type": "genome",
    "identifier": "GCA_019653175.1",
    "organism": "Euryarchaeota archaeon",
    "title": "Euryarchaeota archaeon",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Deep-Sea Bioresource Research Group , Research Center for Bioscience and Nanoscience (CeBN), Japan Agency for Marine-Earth Science and Technology (JAMSTEC)",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_019653175.1",
        "bioproject": "PRJDB11069",
        "biosample": "SAMD00290994",
        "wgs_master": "BPBO00000000.1",
        "refseq_category": "na",
        "taxid": "2026739",
        "species_taxid": "2026739",
        "organism_name": "Euryarchaeota archaeon",
        "infraspecific_name": "",
        "isolate": "Ct9H_90m.P24",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/05/08",
        "asm_name": "ASM1965317v1",
        "submitter": "Deep-Sea Bioresource Research Group , Research Center for Bioscience and Nanoscience (CeBN), Japan Agency for Marine-Earth Science and Technology (JAMSTEC)",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/019/653/175/GCA_019653175.1_ASM1965317v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-05-08",
    "dateModified": "2021-05-08",
    "datePublished": "2021-05-08",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Euryarchaeota archaeon"
        ],
        "sample_taxid": [
            "2026739"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Pacific Ocean"
        ],
        "sample_host_location_id": [],
        "data_size": "0.179 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 21.21,
        "contamination": 0.38,
        "strain_heterogeneity": 100.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "620114",
        "Number of Sequences": "23",
        "Longest Sequences (bp)": "96792",
        "N50 (bp)": "30906",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "49.7",
        "Number of CDSs": "755",
        "Average Protein Length": "216.9",
        "Coding Ratio (%)": "79.2",
        "Number of rRNAs": "0",
        "Number of tRNAs": "24",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 21.21,
            "contamination": 0.38,
            "strain_heterogeneity": 100.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_001629235.1",
                "gtdb_species": "s__MGIIb-O3 sp001629235",
                "ani": 97.2008,
                "matched_fragments": 135,
                "total_fragments": 198,
                "gtdb_taxonomy": "d__Archaea;p__Thermoplasmatota;c__Poseidoniia;o__Poseidoniales;f__Thalassarchaeaceae;g__MGIIb-O3",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.45",
                "min_intra_species_ani": "95.03",
                "mean_intra_species_af": "0.80",
                "min_intra_species_af": "0.68",
                "num_clustered_genomes": 7,
                "status": "inconclusive"
            },
            {
                "accession": "GCA_001628485.1",
                "gtdb_species": "s__MGIIb-O3 sp001628485",
                "ani": 95.0162,
                "matched_fragments": 161,
                "total_fragments": 198,
                "gtdb_taxonomy": "d__Archaea;p__Thermoplasmatota;c__Poseidoniia;o__Poseidoniales;f__Thalassarchaeaceae;g__MGIIb-O3",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.15",
                "min_intra_species_ani": "97.12",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.79",
                "num_clustered_genomes": 10,
                "status": "inconclusive"
            },
            {
                "accession": "GCA_902573015.1",
                "gtdb_species": "s__MGIIb-O3 sp902573015",
                "ani": 94.4008,
                "matched_fragments": 126,
                "total_fragments": 198,
                "gtdb_taxonomy": "d__Archaea;p__Thermoplasmatota;c__Poseidoniia;o__Poseidoniales;f__Thalassarchaeaceae;g__MGIIb-O3",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_001629255.1",
                "gtdb_species": "s__MGIIb-O3 sp001629255",
                "ani": 92.9958,
                "matched_fragments": 152,
                "total_fragments": 198,
                "gtdb_taxonomy": "d__Archaea;p__Thermoplasmatota;c__Poseidoniia;o__Poseidoniales;f__Thalassarchaeaceae;g__MGIIb-O3",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.42",
                "min_intra_species_ani": "97.36",
                "mean_intra_species_af": "0.80",
                "min_intra_species_af": "0.70",
                "num_clustered_genomes": 6,
                "status": "-"
            },
            {
                "accession": "GCA_902625325.1",
                "gtdb_species": "s__MGIIb-O3 sp902625325",
                "ani": 92.1442,
                "matched_fragments": 138,
                "total_fragments": 198,
                "gtdb_taxonomy": "d__Archaea;p__Thermoplasmatota;c__Poseidoniia;o__Poseidoniales;f__Thalassarchaeaceae;g__MGIIb-O3",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902573085.1",
                "gtdb_species": "s__MGIIb-O3 sp902573085",
                "ani": 90.0825,
                "matched_fragments": 110,
                "total_fragments": 198,
                "gtdb_taxonomy": "d__Archaea;p__Thermoplasmatota;c__Poseidoniia;o__Poseidoniales;f__Thalassarchaeaceae;g__MGIIb-O3",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Archaea",
        "p__Thermoplasmatota",
        "c__Poseidoniia",
        "o__Poseidoniales",
        "f__Thalassarchaeaceae",
        "g__UBA36",
        "s__UBA36 sp001629235"
    ],
    "_genome_taxon": [
        "Euryarchaeota",
        "archaeon",
        "d__Archaea",
        "p__Thermoplasmatota",
        "c__Poseidoniia",
        "o__Poseidoniales",
        "f__Thalassarchaeaceae",
        "g__UBA36",
        "s__UBA36 sp001629235",
        "Archaea",
        "Thermoplasmatota",
        "Poseidoniia",
        "Poseidoniales",
        "Thalassarchaeaceae",
        "UBA36",
        "UBA36",
        "sp001629235"
    ],
    "_meo": [
        {
            "id": "MEO_0000041",
            "label": "marine water"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}