{
    "type": "genome",
    "identifier": "GCA_020025655.1",
    "organism": "Oscillospiraceae bacterium",
    "title": "Oscillospiraceae bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Korea Polar Research Institute",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_020025655.1",
        "bioproject": "PRJNA665590",
        "biosample": "SAMN19315091",
        "wgs_master": "JAHHRR000000000.1",
        "refseq_category": "na",
        "taxid": "2485925",
        "species_taxid": "2485925",
        "organism_name": "Oscillospiraceae bacterium",
        "infraspecific_name": "",
        "isolate": "MAG035",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/09/17",
        "asm_name": "ASM2002565v1",
        "submitter": "Korea Polar Research Institute",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/020/025/655/GCA_020025655.1_ASM2002565v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-09-17",
    "dateModified": "2021-09-17",
    "datePublished": "2021-09-17",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Oscillospiraceae bacterium"
        ],
        "sample_taxid": [
            "2485925"
        ],
        "sample_host_organism": [
            "Leptonychotes weddellii"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Antarctica: King George Island"
        ],
        "sample_host_location_id": [],
        "data_size": "0.517 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 77.65,
        "contamination": 4.17,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1811142",
        "Number of Sequences": "84",
        "Longest Sequences (bp)": "70982",
        "N50 (bp)": "35155",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "45.5",
        "Number of CDSs": "1587",
        "Average Protein Length": "327.8",
        "Coding Ratio (%)": "86.2",
        "Number of rRNAs": "0",
        "Number of tRNAs": "31",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 77.65,
            "contamination": 4.17,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_017465025.1",
                "gtdb_species": "s__Limivicinus sp017465025",
                "ani": 77.8561,
                "matched_fragments": 69,
                "total_fragments": 562,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__Limivicinus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003150355.1",
                "gtdb_species": "s__Limivicinus sp003150355",
                "ani": 77.7999,
                "matched_fragments": 61,
                "total_fragments": 562,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__Limivicinus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.34",
                "min_intra_species_ani": "96.94",
                "mean_intra_species_af": "0.74",
                "min_intra_species_af": "0.68",
                "num_clustered_genomes": 6,
                "status": "-"
            },
            {
                "accession": "GCA_004560305.1",
                "gtdb_species": "s__Limivicinus sp004560305",
                "ani": 77.7612,
                "matched_fragments": 56,
                "total_fragments": 562,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__Limivicinus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "96.68",
                "min_intra_species_ani": "96.68",
                "mean_intra_species_af": "0.69",
                "min_intra_species_af": "0.69",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_900546515.1",
                "gtdb_species": "s__Limivicinus sp900546515",
                "ani": 77.457,
                "matched_fragments": 60,
                "total_fragments": 562,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__Limivicinus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.98",
                "min_intra_species_ani": "99.98",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.95",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_900754515.1",
                "gtdb_species": "s__Limivicinus sp900754515",
                "ani": 77.3708,
                "matched_fragments": 61,
                "total_fragments": 562,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__Limivicinus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.83",
                "min_intra_species_ani": "97.83",
                "mean_intra_species_af": "0.85",
                "min_intra_species_af": "0.85",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_900549545.1",
                "gtdb_species": "s__Limivicinus sp900549545",
                "ani": 77.301,
                "matched_fragments": 82,
                "total_fragments": 562,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__Limivicinus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.92",
                "min_intra_species_ani": "99.84",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.88",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_017470325.1",
                "gtdb_species": "s__Limivicinus sp017470325",
                "ani": 77.1745,
                "matched_fragments": 52,
                "total_fragments": 562,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__Limivicinus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017410425.1",
                "gtdb_species": "s__Limivicinus sp017410425",
                "ani": 77.1042,
                "matched_fragments": 58,
                "total_fragments": 562,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__Limivicinus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002493305.1",
                "gtdb_species": "s__Limivicinus sp002493305",
                "ani": 76.9679,
                "matched_fragments": 69,
                "total_fragments": 562,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__Limivicinus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_017458085.1",
                "gtdb_species": "s__Limivicinus sp017458085",
                "ani": 76.845,
                "matched_fragments": 50,
                "total_fragments": 562,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Oscillospiraceae;g__Limivicinus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.302,
        "cell_length": 0.397,
        "doubling_h": null,
        "growth_tmp": 30.0,
        "optimum_tmp": 30.0,
        "optimum_ph": 6.25,
        "genome_size": 4470621.5,
        "gc_content": 49.895,
        "coding_genes": 4347.333,
        "rRNA16S_genes": 3.0,
        "tRNA_genes": 61.0,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Oscillospirales",
        "f__Oscillospiraceae",
        "g__Limivicinus",
        "s__Limivicinus sp020025655"
    ],
    "_genome_taxon": [
        "Oscillospiraceae",
        "bacterium",
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Oscillospirales",
        "f__Oscillospiraceae",
        "g__Limivicinus",
        "s__Limivicinus sp020025655",
        "Bacteria",
        "Bacillota",
        "A",
        "Clostridia",
        "Oscillospirales",
        "Oscillospiraceae",
        "Limivicinus",
        "Limivicinus",
        "sp020025655"
    ],
    "_meo": [
        {
            "id": "MEO_0000054",
            "label": "feces"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}