# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_41	LOCUS_00410	sequence001:46942..47385(-)	internal_stop_codon	47419..47421(-)		WP_000516283.1	response regulator transcription factor	100.0	70.0	98.6
MGA_42	LOCUS_00420	sequence001:47419..47574(-)	internal_stop_codon	47419..47421(-)		WP_053885967.1	response regulator transcription factor	100.0	24.3	98.0
MGA_52	LOCUS_00520	sequence001:53061..53264(-)	frameshift,internal_stop_codon	53337..53339(-)	53087	WP_001284737.1	EscU/YscU/HrcU family type III secretion system export apparatus switch protein	88.1	15.8	91.5
MGA_53	LOCUS_00530	sequence001:53337..53798(-)	frameshift,internal_stop_codon	53337..53339(-)	53087	WP_001284720.1	EscU/YscU/HrcU family type III secretion system export apparatus switch protein	100.0	40.8	95.4
MGA_56	LOCUS_00560	sequence001:54846..55364(-)	frameshift		55423	WP_001387765.1	EscR/YscR/HrcR family type III secretion system export apparatus protein	100.0	77.8	90.1
MGA_57	LOCUS_00570	sequence001:55425..56072(-)	internal_stop_codon	56082..56084(-)		WP_001303644.1	YscQ/HrcQ family type III secretion apparatus protein	88.4	57.9	92.1
MGA_58	LOCUS_00580	sequence001:56082..56447(-)	frameshift,internal_stop_codon	56082..56084(-)	56412	WP_001303644.1	YscQ/HrcQ family type III secretion apparatus protein	90.1	33.2	96.3
MGA_71	LOCUS_00710	sequence001:73546..74025(-)	partial			WP_001298920.1	selenium cofactor biosynthesis protein YqeC	100.0	62.1	99.4
MGA_85	LOCUS_00850	sequence001:94442..95323(-)	frameshift		95465	WP_001701073.1	peptide chain release factor 2	100.0	80.3	99.3
MGA_169	LOCUS_01690	sequence001:184179..184517(-)	internal_stop_codon	184740..184742(-)		WP_001387055.1	hypothetical protein	100.0	52.3	92.9
MGA_172	LOCUS_01720	sequence001:187548..188570(-)	partial			WP_034165920.1	DEAD/DEAH box helicase	99.1	37.8	85.2
MGA_173	LOCUS_01730	sequence001:189172..190230(-)	frameshift		189246	WP_034165920.1	DEAD/DEAH box helicase	93.8	37.0	77.3
MGA_174	LOCUS_01740	sequence001:190471..191295(-)	partial			WP_013096445.1	VasL domain-containing protein	94.9	56.8	45.8
MGA_178	LOCUS_01770	sequence002:1225..1767(-)	frameshift		1945,1707,1788	WP_012904641.1	IS4-like element ISCro3 family transposase	58.3	23.6	84.8
MGA_179	LOCUS_01780	sequence002:1771..2001(-)	frameshift		1945,1707,1788	WP_012905142.1	IS4-like element ISCro3 family transposase	67.1	11.5	98.0
MGA_180	LOCUS_01790	sequence002:1940..2125(-)	frameshift		1945,1710,1791	WP_012905142.1	IS4-like element ISCro3 family transposase	98.4	13.5	96.7
MGA_317	LOCUS_03160	sequence002:150575..151042(+)	partial			WP_000890931.1	phosphatidate cytidylyltransferase	100.0	52.0	94.2
MGA_391	LOCUS_03900	sequence003:56574..60641(+)	partial			WP_000077007.1	DNA translocase FtsK	38.5	38.1	97.5
MGA_446	LOCUS_04450	sequence003:127861..128253(+)	partial			WP_001307090.1	fimbrial chaperone	100.0	55.1	99.2
MGA_476	LOCUS_04740	sequence004:444..2273(+)	frameshift,internal_stop_codon	2272..2274(+)	384	WP_000168958.1	autotransporter YejO	100.0	72.8	96.4
MGA_477	LOCUS_04750	sequence004:2286..2498(+)	internal_stop_codon	2271..2273(+)		WP_000554210.1	autotransporter YejO	100.0	8.1	98.6
MGA_550	LOCUS_05480	sequence004:89201..89392(-)	frameshift		89227	WP_000356785.1	DUF4132 domain-containing protein YehI	93.7	4.9	94.9
MGA_667	LOCUS_06650	sequence005:94686..95873(+)	partial			WP_014640216.1	phosphoethanolamine transferase	100.0	73.0	98.0
MGA_733	LOCUS_07300	sequence006:56043..56231(-)	partial			WP_000148762.1	YdiH family protein	100.0	69.7	100.0
MGA_767	LOCUS_07640	sequence006:95341..96102(+)	internal_stop_codon	95317..95319(+)		WP_000081143.1	type III secretion system effector EspL1	98.8	39.6	95.6
MGA_776	LOCUS_07730	sequence006:103442..103819(-)	frameshift,internal_stop_codon	103890..103892(-)	103769	WP_001310874.1	protein YdjO	96.0	45.3	88.4
MGA_777	LOCUS_07740	sequence006:103890..104246(-)	frameshift,internal_stop_codon	103890..103892(-)	103769	WP_011069371.1	hypothetical protein	100.0	48.0	99.2
MGA_781	LOCUS_07780	sequence007:481..843(+)	partial			WP_001286216.1	gamma carbonic anhydrase family protein	100.0	65.2	100.0
MGA_850	LOCUS_08470	sequence007:47400..47567(-)	partial			WP_000736860.1	YhfG family protein	65.5	65.5	100.0
MGA_872	LOCUS_08690	sequence007:69256..69741(-)	partial			WP_001308094.1	shikimate kinase AroK	100.0	67.1	100.0
MGA_914	LOCUS_09100	sequence008:8030..8230(+)	frameshift		8009	WP_000489578.1	protein YmdA	100.0	64.1	98.5
MGA_1000	LOCUS_09960	sequence008:92894..93046(-)	partial			WP_000123875.1	DUF1391 family protein	100.0	65.8	92.0
MGA_1011	LOCUS_10070	sequence008:97948..98307(+)	partial			WP_011069427.1	hypothetical protein	64.7	69.4	79.2
MGA_1015	LOCUS_10110	sequence008:100603..100758(+)	partial			WP_000935259.1	type I toxin-antitoxin system Hok family toxin	100.0	72.9	100.0
MGA_1018	LOCUS_10140	sequence009:167..1171(-)	frameshift		1226	WP_001083595.1	autotransporter outer membrane beta-barrel domain-containing protein	100.0	71.7	99.1
MGA_1019	LOCUS_10150	sequence009:1182..5450(-)	frameshift		1229	WP_001315515.1	ECSE_1600 family autotransporter	99.0	78.0	96.9
MGA_1036	LOCUS_10320	sequence009:23763..24221(+)	frameshift		24143	WP_000258570.1	putative protein YneK	100.0	41.0	86.8
MGA_1037	LOCUS_10330	sequence009:24170..24877(+)	frameshift		24143	WP_000258546.1	putative protein YneK	100.0	63.3	96.6
MGA_1121	LOCUS_11160	sequence010:10991..12286(+)	frameshift		10888,10966	WP_000579094.1	SopA family protein	100.0	81.9	87.2
MGA_1171	LOCUS_11650	sequence010:66705..67034(+)	partial			WP_000819746.1	DDRRRQL repeat protein YjdP	56.0	56.0	91.8
MGA_1309	LOCUS_13030	sequence012:30529..30969(-)	internal_stop_codon	31108..31110(-)		WP_001276294.1	protein deglycase YajL	100.0	74.5	99.3
MGA_1374	LOCUS_13660	sequence013:8450..8839(-)	partial			WP_001165479.1	2-keto-3-deoxy-L-rhamnonate aldolase	100.0	51.6	96.1
MGA_1398	LOCUS_13900	sequence013:31122..31472(+)	frameshift		30925	WP_001306461.1	M28 family metallopeptidase	78.4	28.2	90.1
MGA_1483	LOCUS_14740	sequence014:41457..41918(+)	partial			WP_001213044.1	protein HyxA	100.0	60.5	97.4
MGA_1496	LOCUS_14870	sequence014:59921..60088(-)	partial			WP_001147277.1	protein YkgL	100.0	73.3	100.0
MGA_1518	LOCUS_15090	sequence014:80713..80994(-)	partial			WP_072088477.1	hypothetical protein	60.2	44.4	62.5
MGA_1528	LOCUS_15180	sequence015:5325..5501(+)	partial			WP_001065757.1	protein YmgC	100.0	70.7	100.0
MGA_1532	LOCUS_15220	sequence015:9833..10753(+)	partial			WP_001390463.1	autotransporter outer membrane beta-barrel domain-containing protein	100.0	39.6	100.0
MGA_1535	LOCUS_15250	sequence015:12087..12413(+)	partial			WP_012779382.1	adhesin-like autotransporter YpjA/EhaD	100.0	7.1	97.2
MGA_1600	LOCUS_15900	sequence016:3..146(+)	partial			WP_000439170.1	NAD(P)/FAD-dependent oxidoreductase	100.0	11.8	93.6
MGA_1603	LOCUS_15930	sequence016:2129..3487(+)	internal_stop_codon	1877..1879(+)		WP_011069547.1	DUF4049 domain-containing protein	99.8	76.3	90.9
MGA_1682	LOCUS_16720	sequence017:8840..9274(-)	partial			WP_097398211.1	cell division protein ZipA	100.0	43.9	100.0
MGA_1734	LOCUS_17240	sequence017:63191..63391(+)	partial			WP_000383836.1	YpfN family protein	74.2	74.2	87.8
MGA_1866	LOCUS_18540	sequence020:2826..3428(-)	frameshift,internal_stop_codon	2825..2827(-)	3466	WP_000871667.1	hypothetical protein	100.0	62.7	98.0
MGA_1867	LOCUS_18550	sequence020:3389..3607(-)	frameshift		3463	WP_000871674.1	hypothetical protein	72.2	16.3	92.3
MGA_1868	LOCUS_18560	sequence020:3620..4765(-)	internal_stop_codon	4955..4957(-)		WP_000946591.1	fimbrial biogenesis outer membrane usher protein	100.0	46.7	97.4
MGA_1869	LOCUS_18570	sequence020:5198..5485(-)	partial			WP_000129330.1	type III secretion system effector EspX1	100.0	20.1	92.6
MGA_1920	LOCUS_19070	sequence021:2..193(+)	partial			WP_000702903.1	alpha-xylosidase	100.0	8.2	98.4
MGA_1954	LOCUS_19410	sequence021:33532..34107(+)	partial			WP_012602581.1	O-antigen ligase family protein	100.0	45.8	94.2
MGA_1990	LOCUS_19760	sequence022:15151..15303(-)	partial			WP_000979516.1	hypothetical protein	100.0	72.5	100.0
MGA_2095	LOCUS_20800	sequence023:59891..>60705(-)	partial			WP_010723107.1	inverse autotransporter adhesin YeeJ	100.0	11.5	98.9
MGA_2174	LOCUS_21580	sequence025:27890..28279(+)	frameshift		28276	WP_000098258.1	glucarate dehydratase	100.0	28.9	100.0
MGA_2175	LOCUS_21590	sequence025:28282..29229(+)	frameshift		28273	WP_000098237.1	glucarate dehydratase	100.0	70.6	99.7
MGA_2184	LOCUS_21680	sequence025:40691..41395(-)	internal_stop_codon	41483..41485(-)		WP_001268460.1	YgcG family protein	88.0	71.0	88.3
MGA_2222	LOCUS_22060	sequence026:25685..25921(-)	partial			WP_001303715.1	type I toxin-antitoxin system toxin HokA	64.1	71.4	100.0
MGA_2235	LOCUS_22190	sequence026:40184..40756(-)	partial			WP_001301527.1	protein bax	100.0	69.3	99.5
MGA_2364	LOCUS_23470	sequence029:1962..2213(+)	partial			WP_001309187.1	anti-adapter protein IraD	100.0	63.8	92.8
MGA_2368	LOCUS_23510	sequence029:4825..5346(-)	frameshift		5287	WP_001298014.1	nucleoside recognition domain-containing protein	92.5	70.5	96.9
MGA_2369	LOCUS_23520	sequence029:5279..5509(-)	frameshift		5287	WP_001295597.1	nucleoside recognition domain-containing protein	98.7	33.0	100.0
MGA_2381	LOCUS_23640	sequence029:16863..17384(+)	frameshift		17336,17663	WP_001304007.1	DUF262 domain-containing protein	91.3	53.9	100.0
MGA_2382	LOCUS_23650	sequence029:17381..18955(+)	frameshift		17336	WP_046082417.1	DUF262 domain-containing protein	100.0	75.2	98.5
MGA_2389	LOCUS_23720	sequence029:26432..26623(+)	partial			WP_000063142.1	BrnA antitoxin family protein	85.7	54.0	64.8
MGA_2522	LOCUS_25050	sequence031:51022..51198(-)	partial			WP_000160093.1	6-phospho-alpha-glucosidase	100.0	13.2	100.0
MGA_2555	LOCUS_25380	sequence032:27612..28406(-)	frameshift		28521	WP_000756914.1	DUF1266 domain-containing protein	100.0	76.3	100.0
MGA_2556	LOCUS_25390	sequence032:28456..28653(-)	frameshift		28521	WP_000756910.1	DUF1266 domain-containing protein	76.9	13.9	90.0
MGA_2575	LOCUS_25580	sequence032:49527..49961(-)	partial			WP_000972260.1	DNA-binding transcriptional regulator NimR	100.0	52.7	98.6
MGA_2621	LOCUS_26030	sequence033:50707..52062(-)	partial			WP_000726696.1	acid resistance putative oxidoreductase YdeP	100.0	59.4	98.4
MGA_2627	LOCUS_26090	sequence034:5169..5378(-)	partial			WP_000186540.1	heme exporter protein CcmD	72.5	72.5	82.0
MGA_2827	LOCUS_28070	sequence038:21489..21806(-)	partial			WP_000211451.1	P22AR C-terminal domain-containing protein	94.3	49.0	81.8
MGA_2883	LOCUS_28630	sequence039:19972..22557(+)	partial			WP_011205530.1	phage tail protein I	14.1	64.7	38.8
MGA_2884	LOCUS_28640	sequence039:22568..23992(+)	partial			WP_000647597.1	tail protein	38.0	47.4	72.8
MGA_2950	LOCUS_29290	sequence041:3212..4477(-)	partial			WP_000030701.1	cell envelope integrity protein TolA	31.6	32.4	93.2
MGA_2987	LOCUS_29650	sequence042:2753..3613(+)	internal_stop_codon	3611..3613(+)		WP_001296867.1	CoA:oxalate CoA-transferase	100.0	75.1	100.0
MGA_2988	LOCUS_29660	sequence042:3719..3898(+)	internal_stop_codon	3611..3613(+)		WP_001296867.1	CoA:oxalate CoA-transferase	100.0	15.5	98.3
MGA_2994	LOCUS_29720	sequence042:12736..12954(-)	partial			WP_000556028.1	D-serine transporter DsdX	100.0	16.2	88.9
MGA_2997	LOCUS_29750	sequence042:16102..16764(+)	partial			WP_001274887.1	aminoimidazole riboside kinase	100.0	72.4	97.7
MGA_3030	LOCUS_30080	sequence043:8265..8840(-)	partial			WP_001088427.1	YjjW family glycine radical enzyme activase	100.0	66.6	96.3
MGA_3235	LOCUS_32110	sequence048:34322..34507(-)	partial			WP_000007252.1	hypothetical protein	98.4	65.2	100.0
MGA_3237	LOCUS_32130	sequence048:34892..35353(-)	partial			WP_014966189.1	RHS element core protein	100.0	11.0	99.3
MGA_3255	LOCUS_32300	sequence049:18385..19359(+)	internal_stop_codon	19357..19359(+)		WP_000036434.1	protein YjgL	100.0	63.6	66.9
MGA_3256	LOCUS_32310	sequence049:19375..19728(+)	frameshift,internal_stop_codon	19357..19359(+)	19695	WP_000036506.1	protein YjgL	100.0	18.1	67.5
MGA_3325	LOCUS_32990	sequence051:23836..24105(-)	partial			WP_002430757.1	biofilm peroxide resistance protein BsmA	100.0	62.7	86.5
MGA_3336	LOCUS_33090	sequence052:1875..2096(-)	frameshift		1949	WP_000337085.1	asparagine synthase B	80.8	10.6	83.1
MGA_3376	LOCUS_33480	sequence053:16319..17164(+)	frameshift		17080,17434	WP_000020611.1	hypothetical protein	98.9	68.3	85.6
MGA_3446	LOCUS_34170	sequence056:6189..6614(+)	partial			WP_000041588.1	zinc resistance sensor/chaperone ZraP	84.4	63.3	98.3
MGA_3537	LOCUS_35050	sequence059:21471..22418(+)	frameshift		22346	WP_001194680.1	glycolate oxidase subunit GlcF	92.7	71.7	99.7
MGA_3538	LOCUS_35060	sequence059:22427..22693(+)	frameshift		22346	WP_001194819.1	glycolate oxidase subunit GlcF	100.0	21.6	98.9
MGA_3615	LOCUS_35810	sequence063:3731..3901(-)	partial			WP_000494244.1	YncJ family protein	100.0	73.7	100.0
MGA_3620	LOCUS_35860	sequence063:8706..9596(+)	partial			WP_001251315.1	ABC transporter permease	78.0	73.8	97.4
MGA_3650	LOCUS_36140	sequence064:22940..24382(-)	partial			WP_001307454.1	cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB	100.0	61.6	97.3
MGA_3703	LOCUS_36660	sequence067:446..1033(-)	internal_stop_codon	1100..1102(-)		WP_000438650.1	FCD domain-containing protein	100.0	78.3	94.9
MGA_3704	LOCUS_36670	sequence067:1447..1872(+)	partial			WP_000095154.1	YgiQ family radical SAM protein	99.3	18.9	100.0
MGA_3705	LOCUS_36680	sequence067:1925..3574(+)	partial			WP_000095187.1	YgiQ family radical SAM protein	100.0	74.3	100.0
MGA_3767	LOCUS_37290	sequence069:20528..>21107(-)	partial			WP_000076226.1	cytosine permease	100.0	45.8	96.4
MGA_3826	LOCUS_37840	sequence073:6265..6780(-)	frameshift		6791	WP_000194575.1	hypothetical protein	96.5	84.2	70.3
MGA_3830	LOCUS_37880	sequence073:8731..9762(+)	partial			WP_001363097.1	hypothetical protein	20.1	65.1	59.4
MGA_3838	LOCUS_37960	sequence073:17550..17762(-)	partial			WP_201996915.1	IS3 family transposase	98.6	18.3	95.7
MGA_3841	LOCUS_37990	sequence073:19158..19739(-)	frameshift		19813	WP_201996915.1	IS3 family transposase	91.7	46.8	89.3
MGA_3848	LOCUS_38060	sequence074:6872..7228(-)	frameshift		7233	WP_000632888.1	ShET2/EspL2 family type III secretion system effector toxin	100.0	22.5	100.0
MGA_3849	LOCUS_38070	sequence074:7225..8445(-)	frameshift		7233	WP_000632888.1	ShET2/EspL2 family type III secretion system effector toxin	99.8	77.3	98.5
MGA_3858	LOCUS_38160	sequence075:71..1771(+)	partial			WP_000556469.1	autotransporter adhesin EhaB	100.0	57.6	97.9
MGA_3875	LOCUS_38330	sequence075:15617..15814(+)	partial			WP_000941942.1	pyrimidine/purine nucleoside phosphorylase	100.0	69.1	100.0
MGA_3876	LOCUS_38340	sequence075:16130..16303(+)	partial			WP_000942006.1	DUF2773 domain-containing protein	100.0	61.3	89.5
MGA_3980	LOCUS_39350	sequence081:14414..14599(-)	partial			WP_000054752.1	4Fe-4S dicluster ferredoxin YfhL	100.0	70.9	98.4
MGA_3995	LOCUS_39490	sequence083:1..1592(+)	partial			WP_000515749.1	host specificity protein J	100.0	46.5	96.6
MGA_3997	LOCUS_39510	sequence083:2824..3561(-)	internal_stop_codon	2824..2826(-)		WP_210269001.1	hypothetical protein	38.0	55.7	38.7
MGA_3998	LOCUS_39520	sequence083:3692..5287(+)	partial			WP_000268883.1	prophage tail fiber N-terminal domain-containing protein	100.0	53.1	87.6
MGA_4056	LOCUS_40090	sequence088:883..1554(+)	frameshift		1473	WP_000339449.1	hydrogenase 4 subunit B	100.0	33.2	78.9
MGA_4057	LOCUS_40100	sequence088:1509..2900(+)	frameshift		1473	WP_000339449.1	hydrogenase 4 subunit B	94.6	65.2	95.0
MGA_4058	LOCUS_40110	sequence088:2911..3669(+)	internal_stop_codon	3667..3669(+)		WP_001301932.1	hydrogenase 4 subunit HyfC	100.0	80.0	94.8
MGA_4059	LOCUS_40120	sequence088:3961..4704(+)	frameshift		3967	WP_000429124.1	hydrogenase 4 subunit HyfD	90.3	46.6	96.9
MGA_4060	LOCUS_40130	sequence088:4737..5105(+)	partial			WP_000429091.1	hydrogenase 4 subunit HyfD	100.0	25.5	93.4
MGA_4062	LOCUS_40150	sequence088:5772..6140(+)	internal_stop_codon	6138..6140(+)		WP_000122538.1	hydrogenase 4 subunit F	100.0	23.2	90.2
MGA_4063	LOCUS_40160	sequence088:6147..7352(+)	internal_stop_codon	6138..6140(+)		WP_000122538.1	hydrogenase 4 subunit F	100.0	76.2	93.8
MGA_4066	LOCUS_40190	sequence088:9890..10318(+)	frameshift		9908	WP_000075574.1	hydrogenase 4 catalytic subunit HyfI	95.8	54.0	97.1
MGA_4069	LOCUS_40220	sequence088:12788..13519(+)	frameshift		13477	WP_001244734.1	formate transporter FocB	94.7	81.6	99.1
MGA_4096	LOCUS_40470	sequence090:11461..12768(+)	partial			WP_181238112.1	autotransporter adhesin EhaB	99.1	42.1	85.4
MGA_4101	LOCUS_40520	sequence091:6200..6730(-)	partial			WP_001356055.1	tRNA-uridine aminocarboxypropyltransferase	100.0	73.3	99.4
MGA_4154	LOCUS_41040	sequence095:9826..10395(-)	partial			WP_000003806.1	lysine--tRNA ligase	100.0	37.4	99.5
MGA_4155	LOCUS_41050	sequence096:370..588(-)	internal_stop_codon	598..600(-)		WP_000063179.1	type I-E CRISPR-associated endoribonuclease Cas2e	100.0	74.2	98.6
MGA_4174	LOCUS_41240	sequence097:9830..9982(-)	partial			WP_000935262.1	type I toxin-antitoxin system Hok family toxin	100.0	72.5	100.0
MGA_4176	LOCUS_41260	sequence098:1181..1996(-)	frameshift		2016	WP_001290321.1	lysine-sensitive aspartokinase 3	100.0	60.4	95.9
MGA_4177	LOCUS_41270	sequence098:1996..2529(-)	frameshift		2016	WP_001290321.1	lysine-sensitive aspartokinase 3	96.6	38.1	90.6
MGA_4197	LOCUS_41460	sequence101:621..2267(+)	frameshift,internal_stop_codon	2461..2463(+)	2261	WP_000491430.1	alpha-amylase family glycosyl hydrolase	99.8	72.9	96.9
MGA_4226	LOCUS_41720	sequence104:7528..>8059(-)	partial			WP_000671574.1	inosine/guanosine kinase	90.9	36.9	96.2
MGA_4233	LOCUS_41790	sequence106:149..385(-)	frameshift		423	WP_000360445.1	YaeF family permuted papain-like enzyme	100.0	28.5	98.7
MGA_4234	LOCUS_41800	sequence106:391..702(-)	frameshift		423	WP_001336393.1	YaeF family permuted papain-like enzyme	98.1	36.9	92.1
MGA_4255	LOCUS_41970	sequence110:1..1938(+)	partial			WP_001034469.1	lipoprotein metalloprotease SslE	100.0	42.4	96.6
