{ "type": "genome", "identifier": "GCA_020026155.1", "organism": "Actinobacillus sp.", "title": "Actinobacillus sp.", "description": "derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "Korea Polar Research Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCA_020026155.1", "bioproject": "PRJNA665590", "biosample": "SAMN19315071", "wgs_master": "JAHHQX000000000.1", "refseq_category": "na", "taxid": "41114", "species_taxid": "41114", "organism_name": "Actinobacillus sp.", "infraspecific_name": "", "isolate": "MAG015", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/09/17", "asm_name": "ASM2002615v1", "submitter": "Korea Polar Research Institute", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/020/026/155/GCA_020026155.1_ASM2002615v1", "excluded_from_refseq": "derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-09-17", "dateModified": "2021-09-17", "datePublished": "2021-09-17", "_annotation": { "sample_count": 1, "sample_organism": [ "Actinobacillus sp." ], "sample_taxid": [ "41114" ], "sample_host_organism": [ "Leptonychotes weddellii" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Antarctica: King George Island" ], "sample_host_location_id": [], "data_size": "0.482 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 97.73, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "1696259", "Number of Sequences": "29", "Longest Sequences (bp)": "154918", "N50 (bp)": "104466", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "38.2", "Number of CDSs": "1564", "Average Protein Length": "317.2", "Coding Ratio (%)": "87.7", "Number of rRNAs": "0", "Number of tRNAs": "28", "Number of CRISPRs": "2" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Haemophilus aegyptius", "strain": "strain=NCTC8502", "accession": "GCA_900475885.1", "taxid": 197575, "species_taxid": 197575, "relation_to_type": "type", "validated": true, "ani": 78.1163, "matched_fragments": 94, "total_fragments": 554, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rodentibacter heidelbergensis", "strain": "strain=Ac69", "accession": "GCA_002000125.1", "taxid": 1908258, "species_taxid": 1908258, "relation_to_type": "type", "validated": true, "ani": 78.0472, "matched_fragments": 69, "total_fragments": 554, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Avibacterium gallinarum", "strain": "strain=DSM 17481", "accession": 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"status": "below_threshold" }, { "organism_name": "Haemophilus parainfluenzae", "strain": "strain=NCTC 7857", "accession": "GCA_900450845.1", "taxid": 729, "species_taxid": 729, "relation_to_type": "suspected-type", "validated": true, "ani": 77.7946, "matched_fragments": 117, "total_fragments": 554, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Haemophilus parainfluenzae", "strain": "strain=FDAARGOS_1000", "accession": "GCA_016127215.1", "taxid": 729, "species_taxid": 729, "relation_to_type": "suspected-type", "validated": true, "ani": 77.7874, "matched_fragments": 115, "total_fragments": 554, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Canicola haemoglobinophilus", "strain": "strain=NCTC1659", "accession": "GCA_900450725.1", "taxid": 733, "species_taxid": 733, "relation_to_type": "type", "validated": true, "ani": 77.775, "matched_fragments": 117, "total_fragments": 554, "ani_threshold": 95, "status": "below_threshold" }, { 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