{
    "type": "genome",
    "identifier": "GCA_020048375.1",
    "organism": "Anaerolinea sp.",
    "title": "Anaerolinea sp.",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "University of Michigan",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_020048375.1",
        "bioproject": "PRJNA72255",
        "biosample": "SAMN20441966",
        "wgs_master": "JAIFMQ000000000.1",
        "refseq_category": "na",
        "taxid": "1872519",
        "species_taxid": "1872519",
        "organism_name": "Anaerolinea sp.",
        "infraspecific_name": "",
        "isolate": "bin_43",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/09/20",
        "asm_name": "ASM2004837v1",
        "submitter": "University of Michigan",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/020/048/375/GCA_020048375.1_ASM2004837v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-09-20",
    "dateModified": "2021-09-20",
    "datePublished": "2021-09-20",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Anaerolinea sp."
        ],
        "sample_taxid": [
            "1872519"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA: northwestern Lake Huron"
        ],
        "sample_host_location_id": [],
        "data_size": "0.365 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 44.91,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1290979",
        "Number of Sequences": "167",
        "Longest Sequences (bp)": "18348",
        "N50 (bp)": "7592",
        "Gap Ratio (%)": "0.013091",
        "GCcontent (%)": "55.7",
        "Number of CDSs": "1048",
        "Average Protein Length": "317.1",
        "Coding Ratio (%)": "77.2",
        "Number of rRNAs": "0",
        "Number of tRNAs": "13",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 44.91,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
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                "accession": "GCA_903837815.1",
                "gtdb_species": "s__OLB14 sp903837815",
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                "matched_fragments": 210,
                "total_fragments": 336,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__EnvOPS12;g__OLB14",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016234555.1",
                "gtdb_species": "s__OLB14 sp016234555",
                "ani": 81.0856,
                "matched_fragments": 215,
                "total_fragments": 336,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__EnvOPS12;g__OLB14",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016235445.1",
                "gtdb_species": "s__OLB14 sp016235445",
                "ani": 77.7561,
                "matched_fragments": 114,
                "total_fragments": 336,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__EnvOPS12;g__OLB14",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016234495.1",
                "gtdb_species": "s__OLB14 sp016234495",
                "ani": 77.606,
                "matched_fragments": 121,
                "total_fragments": 336,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__EnvOPS12;g__OLB14",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016191985.1",
                "gtdb_species": "s__OLB14 sp016191985",
                "ani": 77.5826,
                "matched_fragments": 79,
                "total_fragments": 336,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__EnvOPS12;g__OLB14",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_013112685.1",
                "gtdb_species": "s__OLB14 sp013112685",
                "ani": 77.5533,
                "matched_fragments": 112,
                "total_fragments": 336,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__EnvOPS12;g__OLB14",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016718275.1",
                "gtdb_species": "s__OLB14 sp016718275",
                "ani": 77.5284,
                "matched_fragments": 98,
                "total_fragments": 336,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__EnvOPS12;g__OLB14",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.35",
                "min_intra_species_ani": "98.30",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.91",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_016234535.1",
                "gtdb_species": "s__OLB14 sp016234535",
                "ani": 77.4731,
                "matched_fragments": 81,
                "total_fragments": 336,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__EnvOPS12;g__OLB14",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_013140605.1",
                "gtdb_species": "s__OLB14 sp013140605",
                "ani": 77.2718,
                "matched_fragments": 83,
                "total_fragments": 336,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__EnvOPS12;g__OLB14",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016191845.1",
                "gtdb_species": "s__JACPVF01 sp016191845",
                "ani": 77.0626,
                "matched_fragments": 62,
                "total_fragments": 336,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__EnvOPS12;g__JACPVF01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_015075725.1",
                "gtdb_species": "s__OLB14 sp008363285",
                "ani": 76.6015,
                "matched_fragments": 69,
                "total_fragments": 336,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__EnvOPS12;g__OLB14",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.20",
                "min_intra_species_ani": "98.20",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.92",
                "num_clustered_genomes": 2,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.523,
        "cell_length": null,
        "doubling_h": 1.769,
        "growth_tmp": 52.5,
        "optimum_tmp": 52.5,
        "optimum_ph": 7.0,
        "genome_size": 3853121.75,
        "gc_content": 54.211,
        "coding_genes": 3121.0,
        "rRNA16S_genes": 2.0,
        "tRNA_genes": 49.0,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.0,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": 0.0,
        "thermophilic_range_tmp": 1.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 0.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 1.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Chloroflexota",
        "c__Anaerolineae",
        "o__Anaerolineales",
        "f__Villigracilaceae",
        "g__Villigracilis",
        "s__"
    ],
    "_genome_taxon": [
        "Anaerolinea",
        "sp.",
        "d__Bacteria",
        "p__Chloroflexota",
        "c__Anaerolineae",
        "o__Anaerolineales",
        "f__Villigracilaceae",
        "g__Villigracilis",
        "s__",
        "Bacteria",
        "Chloroflexota",
        "Anaerolineae",
        "Anaerolineales",
        "Villigracilaceae",
        "Villigracilis",
        "s",
        "",
        ""
    ],
    "_meo": [
        {
            "id": "MEO_0000116",
            "label": "biofilm"
        },
        {
            "id": "MEO_0000038",
            "label": "freshwater"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}