{
    "type": "genome",
    "identifier": "GCA_020048535.1",
    "organism": "Bacillariophyta sp.",
    "title": "Bacillariophyta sp.",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "University of Michigan",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_020048535.1",
        "bioproject": "PRJNA72255",
        "biosample": "SAMN20441959",
        "wgs_master": "JAIFMJ000000000.1",
        "refseq_category": "na",
        "taxid": "2082584",
        "species_taxid": "2082584",
        "organism_name": "Bacillariophyta sp.",
        "infraspecific_name": "",
        "isolate": "Bin_3_3",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/09/20",
        "asm_name": "ASM2004853v1",
        "submitter": "University of Michigan",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/020/048/535/GCA_020048535.1_ASM2004853v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-09-20",
    "dateModified": "2021-09-20",
    "datePublished": "2021-09-20",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Bacillariophyta sp."
        ],
        "sample_taxid": [
            "2082584"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA: northwestern Lake Huron"
        ],
        "sample_host_location_id": [],
        "data_size": "5.885 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 87.5,
        "contamination": 225.06,
        "strain_heterogeneity": 3.25,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "19794973",
        "Number of Sequences": "1893",
        "Longest Sequences (bp)": "182994",
        "N50 (bp)": "10902",
        "Gap Ratio (%)": "0.014746",
        "GCcontent (%)": "43.2",
        "Number of CDSs": "18404",
        "Average Protein Length": "248.0",
        "Coding Ratio (%)": "69.2",
        "Number of rRNAs": "1",
        "Number of tRNAs": "492",
        "Number of CRISPRs": "42"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 87.5,
            "contamination": 225.06,
            "strain_heterogeneity": 3.25
        },
        "gtdb_result": [
            {
                "accession": "GCA_007693875.1",
                "gtdb_species": "s__Spirulina sp007693875",
                "ani": 83.7764,
                "matched_fragments": 59,
                "total_fragments": 5581,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Spirulinaceae;g__Spirulina",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_011390265.1",
                "gtdb_species": "s__Spirulina sp011390265",
                "ani": 81.8762,
                "matched_fragments": 55,
                "total_fragments": 5581,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Spirulinaceae;g__Spirulina",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Patescibacteria",
        "c__Paceibacteria",
        "o__UBA9973",
        "f__JAACPR01",
        "g__",
        "s__"
    ],
    "_genome_taxon": [
        "Bacillariophyta",
        "sp.",
        "d__Bacteria",
        "p__Patescibacteria",
        "c__Paceibacteria",
        "o__UBA9973",
        "f__JAACPR01",
        "g__",
        "s__",
        "Bacteria",
        "Patescibacteria",
        "Paceibacteria",
        "UBA9973",
        "JAACPR01",
        "g",
        "",
        "",
        "s",
        "",
        ""
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}