# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_12	LOCUS_00120	sequence001:15398..15550(+)	frameshift		15762,15560,15642,15771,15547	WP_011037404.1	ethanolamine ammonia-lyase subunit EutB	88.0	9.4	54.5
MGA_16	LOCUS_00160	sequence001:23239..23529(-)	frameshift,internal_stop_codon	23574..23576(-)	23186,23555,23267	WP_004193430.1	beta-N-acetylhexosaminidase	91.7	25.7	70.5
MGA_21	LOCUS_00210	sequence001:26961..27947(-)	partial			WP_009938303.1	ribonuclease III	71.6	50.3	65.5
MGA_27	LOCUS_00270	sequence001:32757..32927(-)	frameshift,internal_stop_codon	32594..32596(-),32756..32758(-)	33123,33077,32662,32473,32927	WP_003813791.1	DegQ family serine endoprotease	100.0	11.3	50.0
MGA_39	LOCUS_00390	sequence001:42977..43231(+)	frameshift,internal_stop_codon	43229..43231(+)	43261,43429	WP_004192535.1	Maf-like protein	98.8	42.8	54.3
MGA_44	LOCUS_00440	sequence001:47354..47689(-)	partial			WP_004193415.1	Rieske 2Fe-2S domain-containing protein	87.4	74.0	51.5
MGA_45	LOCUS_00450	sequence001:47811..48080(-)	frameshift,internal_stop_codon	48096..48098(-)	47843	WP_004524610.1	HAD-IA family hydrolase	82.0	37.0	58.0
MGA_49	LOCUS_00490	sequence001:55438..55674(+)	frameshift,internal_stop_codon	55421..55423(+),55373..55375(+),55298..55300(+)	55243,55636	WP_004524705.1	sterol desaturase family protein	78.2	19.8	41.5
MGA_50	LOCUS_00500	sequence001:55649..56062(+)	frameshift,internal_stop_codon	55420..55422(+),55372..55374(+)	56009,56002,55635	WP_004524705.1	sterol desaturase family protein	83.9	34.7	42.4
MGA_55	LOCUS_00550	sequence001:60004..60303(-)	frameshift,internal_stop_codon	60368..60370(-)	60298,60021	WP_011203830.1	D-glycerate dehydrogenase	92.9	27.7	59.8
MGA_57	LOCUS_00570	sequence001:62186..62500(-)	frameshift,internal_stop_codon	62186..62188(-),62463..62465(-)	62366	WP_004192078.1	nicotinate phosphoribosyltransferase	58.7	15.3	62.3
MGA_59	LOCUS_00590	sequence002:427..717(+)	partial			WP_003806902.1	elongation factor G	90.6	12.4	56.8
MGA_61	LOCUS_00610	sequence002:2289..2525(-)	frameshift,internal_stop_codon	2524..2526(-),2776..2778(-)	2352,2327,2757,2679	WP_004192727.1	ABC transporter ATP-binding protein	92.3	24.3	53.4
MGA_63	LOCUS_00630	sequence002:3529..3687(-)	frameshift,internal_stop_codon	3529..3531(-),3475..3477(-),3469..3471(-)	3465,3351	WP_004526940.1	TauD/TfdA family dioxygenase	100.0	15.4	67.3
MGA_64	LOCUS_00640	sequence002:3947..4639(-)	partial			WP_011389343.1	diguanylate cyclase	74.3	39.0	41.7
MGA_68	LOCUS_00680	sequence002:9138..9527(-)	partial			WP_002721436.1	molybdenum cofactor biosynthesis protein MoaE	82.9	73.3	50.5
MGA_69	LOCUS_00690	sequence002:9680..10093(-)	frameshift,internal_stop_codon	9680..9682(-),10094..10096(-),10202..10204(-)	9670	WP_004192374.1	molybdopterin molybdotransferase MoeA	98.5	37.4	52.8
MGA_70	LOCUS_00700	sequence002:10202..10450(-)	internal_stop_codon	10094..10096(-),10202..10204(-)		WP_004192374.1	molybdopterin molybdotransferase MoeA	95.1	18.1	59.0
MGA_75	LOCUS_00750	sequence002:16961..17212(+)	frameshift,internal_stop_codon	16856..16858(+),17210..17212(+)	16704,17446	WP_010948521.1	Tex family protein	95.2	10.0	54.4
MGA_76	LOCUS_00760	sequence002:17460..17597(+)	frameshift,internal_stop_codon	17829..17831(+),17595..17597(+)	17449	WP_013223450.1	Tex family protein	97.8	5.5	61.4
MGA_77	LOCUS_00770	sequence002:17670..17831(+)	frameshift,internal_stop_codon	17829..17831(+),17595..17597(+)	17449,17903	WP_011031148.1	Tex family protein	96.2	6.5	82.4
MGA_78	LOCUS_00780	sequence002:17918..18091(+)	frameshift,internal_stop_codon	17829..17831(+)	17894	WP_002224749.1	Tex family protein	70.2	5.3	75.0
MGA_80	LOCUS_00800	sequence002:19710..20243(+)	frameshift,internal_stop_codon	20344..20346(+),20125..20127(+)	20112,19716,20079	WP_004194395.1	HlyC/CorC family transporter	68.4	27.8	48.8
MGA_82	LOCUS_00820	sequence002:20344..20562(+)	frameshift,internal_stop_codon	20341..20343(+)	20553	WP_003111904.1	HlyC/CorC family transporter	93.1	15.6	46.3
MGA_84	LOCUS_00840	sequence002:21160..21564(+)	partial			WP_011103349.1	type II secretion system F family protein	83.6	27.2	39.3
MGA_90	LOCUS_00900	sequence002:24996..25268(-)	frameshift,internal_stop_codon	25243..25245(-),24909..24911(-),24870..24872(-)	25468,25221,25022,25013	WP_004194150.1	ATP-binding protein	76.7	23.9	60.9
MGA_91	LOCUS_00910	sequence002:25243..25581(-)	frameshift,internal_stop_codon	25243..25245(-),25532..25534(-),25523..25525(-)	25468,25221,25022,25013	WP_004194150.1	ATP-binding protein	66.1	25.6	66.2
MGA_94	LOCUS_00940	sequence002:30460..30756(-)	internal_stop_codon	30460..30462(-)		WP_003814565.1	M23 family metallopeptidase	92.9	28.0	33.7
MGA_117	LOCUS_01170	sequence002:54665..55021(-)	frameshift,internal_stop_codon	54637..54639(-)	55018,55234,54615,54687	WP_004194278.1	tRNA dihydrouridine synthase DusB	94.1	35.6	51.6
MGA_118	LOCUS_01180	sequence002:54975..55226(-)	frameshift		55018,55234	WP_004194278.1	tRNA dihydrouridine synthase DusB	83.1	20.9	62.2
MGA_120	LOCUS_01200	sequence002:56193..56585(-)	frameshift,internal_stop_codon	56775..56777(-),56796..56798(-),56688..56690(-)	56678,56567	WP_004533589.1	histidine phosphatase family protein	83.1	45.9	33.3
MGA_125	LOCUS_01250	sequence003:763..1008(+)	frameshift,internal_stop_codon	1103..1105(+)	1210,1005	WP_005765499.1	type IV pilus secretin PilQ	84.0	9.7	41.2
MGA_128	LOCUS_01280	sequence003:4564..4800(+)	frameshift,internal_stop_codon	4454..4456(+),4799..4801(+)	4528	WP_005765949.1	DUF4197 domain-containing protein	100.0	35.4	42.0
MGA_131	LOCUS_01310	sequence003:5736..5969(-)	internal_stop_codon	6069..6071(-),5985..5987(-),6087..6089(-),5736..5738(-)		WP_004195216.1	RNA polymerase factor sigma-54	100.0	15.3	79.2
MGA_134	LOCUS_01340	sequence003:8049..8591(-)	partial			WP_009936242.1	lipopolysaccharide transport periplasmic protein LptA	87.8	71.9	49.7
MGA_148	LOCUS_01480	sequence003:21076..21225(+)	frameshift,internal_stop_codon	21224..21226(+)	21256,20965	WP_003243083.1	(2,3-dihydroxybenzoyl)adenylate synthase	100.0	9.1	75.5
MGA_149	LOCUS_01490	sequence003:21759..21944(+)	frameshift,internal_stop_codon	21741..21743(+)	21655	WP_001007276.1	isochorismatase	96.7	20.0	49.2
MGA_153	LOCUS_01530	sequence003:23187..23435(+)	frameshift,internal_stop_codon	22996..22998(+),23175..23177(+)	23145,23155	WP_014207266.1	TonB-dependent receptor	91.5	8.2	57.3
MGA_154	LOCUS_01540	sequence003:24128..24403(+)	frameshift,internal_stop_codon	24401..24403(+),24488..24490(+),24491..24493(+)	24156,24535	WP_004196743.1	transposase	90.1	34.6	48.8
MGA_155	LOCUS_01550	sequence003:24549..24806(+)	frameshift,internal_stop_codon	24401..24403(+),24488..24490(+),24491..24493(+)	24535	WP_004196743.1	transposase	85.9	30.8	38.4
MGA_161	LOCUS_01610	sequence003:33764..34498(+)	partial			WP_004521932.1	VacJ family lipoprotein	94.3	69.9	45.3
MGA_164	LOCUS_01640	sequence003:35794..36141(+)	partial			WP_004521934.1	ABC transporter ATP-binding protein	84.3	30.5	54.6
MGA_185	LOCUS_01850	sequence003:50285..50473(+)	frameshift,internal_stop_codon	50499..50501(+)	50313,50443,50531	WP_011036401.1	RNA-binding S4 domain-containing protein	69.4	31.9	53.5
MGA_187	LOCUS_01870	sequence003:51325..51585(+)	frameshift,internal_stop_codon	51166..51168(+),51232..51234(+)	51071	WP_010925700.1	TetR/AcrR family transcriptional regulator	83.7	33.6	52.8
MGA_194	LOCUS_01940	sequence004:489..668(-)	frameshift,internal_stop_codon	360..362(-)	497,420,478	WP_015704331.1	two-component system sensor histidine kinase CreC	81.4	10.1	56.2
MGA_195	LOCUS_01950	sequence004:2237..2473(+)	frameshift,internal_stop_codon	2227..2229(+)	2153,2081,2006,2463	WP_004523004.1	nitronate monooxygenase family protein	96.2	23.5	60.0
MGA_220	LOCUS_02200	sequence004:31686..31823(+)	internal_stop_codon	31476..31478(+),31821..31823(+),31623..31625(+),31659..31661(+)		WP_004190814.1	aromatic ring-hydroxylating dioxygenase subunit alpha	97.8	12.0	79.5
MGA_224	LOCUS_02240	sequence004:35087..35365(-)	frameshift,internal_stop_codon	35090..35092(-),35427..35429(-)	35360,35402,35108,35607	WP_000213961.1	dienelactone hydrolase family protein	89.1	29.6	45.1
MGA_225	LOCUS_02250	sequence004:35503..35913(-)	frameshift,internal_stop_codon	35427..35429(-)	35360,35402,35607	WP_011143390.1	dienelactone hydrolase family protein	69.9	32.5	55.2
MGA_227	LOCUS_02270	sequence004:38927..39499(+)	frameshift,internal_stop_codon	38900..38902(+)	39469	WP_004530319.1	TIGR00730 family Rossman fold protein	95.3	73.9	63.0
MGA_231	LOCUS_02310	sequence004:42341..42541(-)	frameshift,internal_stop_codon	42563..42565(-)	42403,42279,42364,42283,42188,42143	WP_003812546.1	UvrD-helicase domain-containing protein	78.8	6.8	67.3
MGA_236	LOCUS_02350	sequence005:4437..4892(+)	frameshift,internal_stop_codon	4945..4947(+)	4820	WP_004189139.1	PhoH family protein	88.7	41.8	43.5
MGA_238	LOCUS_02370	sequence005:5198..5656(+)	partial			WP_004530902.1	rRNA maturation RNase YbeY	95.4	50.0	47.3
MGA_239	LOCUS_02380	sequence005:6260..6460(+)	internal_stop_codon	6227..6229(+),6122..6124(+),5975..5977(+),6074..6076(+),6008..6010(+)		WP_004536033.1	cytochrome b/b6 domain-containing protein	98.5	17.2	66.2
MGA_240	LOCUS_02390	sequence005:6580..6864(+)	frameshift,internal_stop_codon	6880..6882(+),6970..6972(+),6862..6864(+)	6563	WP_004526525.1	molybdopterin-dependent oxidoreductase	98.9	35.4	57.0
MGA_271	LOCUS_02700	sequence005:35325..36509(-)	frameshift		35410	WP_003815155.1	threonine ammonia-lyase, biosynthetic	79.7	61.2	52.3
MGA_275	LOCUS_02740	sequence006:178..444(-)	frameshift		538,501	WP_004526464.1	NUDIX domain-containing protein	63.6	30.6	60.0
MGA_290	LOCUS_02890	sequence006:16390..16821(-)	partial			WP_004185627.1	preprotein translocase subunit SecG	64.3	73.6	47.8
MGA_291	LOCUS_02900	sequence006:16938..17444(-)	partial			WP_004186004.1	triose-phosphate isomerase	100.0	62.0	62.5
MGA_297	LOCUS_02960	sequence006:24553..24864(-)	frameshift,internal_stop_codon	24540..24542(-),24922..24924(-)	24573	WP_004191816.1	GTPase HflX	95.1	26.4	65.7
MGA_298	LOCUS_02970	sequence006:24922..25578(-)	internal_stop_codon	24922..24924(-)		WP_004191816.1	GTPase HflX	100.0	56.3	67.0
MGA_311	LOCUS_03100	sequence006:37646..37960(-)	frameshift,internal_stop_codon	38241..38243(-),37959..37961(-)	38093,38213	WP_004193640.1	RNA polymerase sigma factor RpoS	71.2	20.6	55.4
MGA_318	LOCUS_03170	sequence007:3423..3737(+)	frameshift,internal_stop_codon	3205..3207(+)	3333	WP_003119359.1	ABC transporter ATP-binding protein	95.2	28.4	47.6
MGA_320	LOCUS_03190	sequence007:4064..4282(+)	frameshift,internal_stop_codon	3982..3984(+),4286..4288(+),4386..4388(+)	4026,4225,4451,4375,3818	WP_003092241.1	ABC transporter permease	68.1	16.5	69.4
MGA_321	LOCUS_03200	sequence007:4472..4870(+)	partial			WP_003113878.1	ABC transporter permease	52.3	27.0	68.1
MGA_323	LOCUS_03220	sequence007:5128..5658(+)	frameshift,internal_stop_codon	5657..5659(+)	5112,5076	WP_003113877.1	spermidine/putrescine ABC transporter substrate-binding protein	100.0	49.7	52.8
MGA_328	LOCUS_03270	sequence007:9664..9885(+)	internal_stop_codon	9469..9471(+),9604..9606(+)		WP_010929972.1	endonuclease/exonuclease/phosphatase family protein	97.3	24.8	50.7
MGA_329	LOCUS_03280	sequence007:9981..10193(+)	partial			WP_010929972.1	endonuclease/exonuclease/phosphatase family protein	74.3	18.2	59.6
MGA_335	LOCUS_03340	sequence007:14308..14817(+)	partial			WP_004527881.1	ClpXP protease specificity-enhancing factor	68.0	66.5	61.7
MGA_343	LOCUS_03420	sequence007:20325..20597(+)	frameshift,internal_stop_codon	20596..20598(+)	20316	WP_003112662.1	Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha	100.0	24.5	50.5
MGA_344	LOCUS_03430	sequence007:20628..20855(+)	internal_stop_codon	20595..20597(+)		WP_003112662.1	Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha	81.3	16.1	68.9
MGA_347	LOCUS_03460	sequence007:21760..21954(+)	frameshift,internal_stop_codon	21952..21954(+)	21722	WP_004194392.1	NAD(P) transhydrogenase subunit alpha	100.0	58.7	71.9
MGA_348	LOCUS_03470	sequence007:21993..22376(+)	frameshift,internal_stop_codon	22494..22496(+)	22604	WP_003813039.1	NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta	98.4	36.2	48.6
MGA_349	LOCUS_03480	sequence007:22567..22782(+)	frameshift,internal_stop_codon	22494..22496(+),22374..22376(+)	22604	WP_003083975.1	NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta	81.7	12.1	84.5
MGA_353	LOCUS_03520	sequence007:26123..26734(-)	frameshift		26759	WP_015039134.1	nucleotidyltransferase family protein	100.0	83.9	39.2
MGA_359	LOCUS_03580	sequence007:34150..34395(-)	frameshift,internal_stop_codon	34074..34076(-),34059..34061(-)	34212,34142	WP_001237796.1	lactoylglutathione lyase	75.3	45.2	62.3
MGA_366	LOCUS_03650	sequence008:7368..7706(-)	frameshift		7680,7963	WP_005765316.1	allantoinase PuuE	91.1	31.7	53.9
MGA_367	LOCUS_03660	sequence008:7958..8152(-)	frameshift,internal_stop_codon	8216..8218(-)	7966	WP_003897147.1	allantoinase PuuE	96.9	20.7	61.3
MGA_368	LOCUS_03670	sequence008:9332..9490(+)	frameshift,internal_stop_codon	9249..9251(+),9489..9491(+)	9248	WP_033446426.1	SMC-Scp complex subunit ScpB	98.1	14.1	64.7
MGA_377	LOCUS_03760	sequence008:21778..21966(-)	internal_stop_codon	21700..21702(-),21778..21780(-)		WP_164925630.1	IS3-like element ISSod2 family transposase	93.5	15.9	50.0
MGA_378	LOCUS_03770	sequence008:22187..22372(-)	partial			WP_223804314.1	IS3-like element ISLpn8 family transposase	98.4	16.3	55.0
MGA_391	LOCUS_03900	sequence009:1..6361(+)	frameshift,internal_stop_codon	410..412(+)	2349,2351,6332,439,6333,2236,2237,382	WP_147443659.1	non-ribosomal peptide synthetase	97.8	18.8	32.8
MGA_392	LOCUS_03910	sequence009:6358..17625(+)	partial			WP_010895613.1	non-ribosomal peptide synthetase	98.7	69.6	33.6
MGA_394	LOCUS_03930	sequence009:18386..19195(+)	partial			WP_007324116.1	glycosyltransferase	50.6	55.6	36.1
MGA_396	LOCUS_03950	sequence009:19996..28374(+)	frameshift		22584	WP_013226861.1	non-ribosomal peptide synthetase	79.9	34.2	35.6
MGA_399	LOCUS_03980	sequence009:30662..31075(-)	partial			WP_028008831.1	integrase core domain-containing protein	33.6	42.3	48.9
MGA_408	LOCUS_04070	sequence010:11914..12477(+)	frameshift,internal_stop_codon	12688..12690(+),11860..11862(+),12604..12606(+)	12522,12468	WP_003095915.1	glucan biosynthesis protein G	98.9	39.8	43.1
MGA_410	LOCUS_04090	sequence010:13738..14010(+)	frameshift,internal_stop_codon	14009..14011(+),13554..13556(+),13729..13731(+),13711..13713(+)	13571,14020,13843,14195,13803	WP_050298322.1	glucans biosynthesis glucosyltransferase MdoH	100.0	10.6	66.0
MGA_411	LOCUS_04100	sequence010:14027..14236(+)	frameshift,internal_stop_codon	14009..14011(+),14359..14361(+)	13843,13803,14020,14195	WP_003103448.1	glucans biosynthesis glucosyltransferase MdoH	97.1	11.4	33.7
MGA_413	LOCUS_04120	sequence010:14380..14754(+)	frameshift,internal_stop_codon	14358..14360(+)	14203,14700,14471	WP_003103448.1	glucans biosynthesis glucosyltransferase MdoH	72.6	10.8	45.2
MGA_414	LOCUS_04130	sequence010:15165..15359(+)	internal_stop_codon	15357..15359(+),15072..15074(+)		WP_011039214.1	glucan biosynthesis protein D	87.5	10.5	48.2
MGA_416	LOCUS_04150	sequence010:17427..17705(-)	frameshift		17429,17685	WP_010941130.1	M48 family metallopeptidase	88.0	23.8	44.7
MGA_418	LOCUS_04170	sequence010:18432..18716(+)	partial			WP_010967322.1	aquaporin Z	94.7	38.4	61.8
MGA_433	LOCUS_04320	sequence011:4265..4621(+)	frameshift,internal_stop_codon	4620..4622(+),4641..4643(+)	4229	WP_010931379.1	thiol:disulfide interchange protein DsbC	99.2	41.6	50.4
MGA_446	LOCUS_04450	sequence011:16614..16766(+)	frameshift		16760,16788	WP_009936075.1	alkaline phosphatase	94.0	9.6	70.2
MGA_447	LOCUS_04460	sequence011:16791..17102(+)	frameshift,internal_stop_codon	17101..17103(+)	16760,17130,16788,17191	WP_009936075.1	alkaline phosphatase	100.0	18.2	44.7
MGA_449	LOCUS_04480	sequence011:17436..17777(+)	frameshift		17401,17187,17413	WP_011706596.1	alkaline phosphatase	69.9	18.6	53.5
MGA_450	LOCUS_04490	sequence011:17728..18135(-)	frameshift,internal_stop_codon	18417..18419(-),18348..18350(-)	17756,18167	WP_011269157.1	non-ribosomal peptide synthetase	93.3	9.1	57.9
MGA_451	LOCUS_04500	sequence011:19281..20144(-)	partial			WP_011084053.1	O-acetylhomoserine aminocarboxypropyltransferase	79.4	53.4	49.8
MGA_453	LOCUS_04520	sequence011:21131..21526(+)	frameshift,internal_stop_codon	21758..21760(+)	21507,21651,21204,21495,21098,21182	WP_009937746.1	MFS transporter	83.2	16.9	56.0
MGA_454	LOCUS_04530	sequence011:21763..22533(+)	frameshift,internal_stop_codon	22565..22567(+),21754..21756(+)	21650,22500	WP_009937746.1	MFS transporter	91.8	36.6	47.5
MGA_457	LOCUS_04560	sequence011:23274..23762(+)	frameshift,internal_stop_codon	23247..23249(+),23186..23188(+),23905..23907(+)	23720,23801,23194	WP_003147076.1	nucleoside hydrolase	92.0	45.7	56.2
MGA_459	LOCUS_04580	sequence011:25781..26095(+)	frameshift,internal_stop_codon	26157..26159(+),26093..26095(+)	26140	WP_004526443.1	group II truncated hemoglobin	93.3	69.9	57.7
MGA_461	LOCUS_04600	sequence011:28111..28389(-)	frameshift,internal_stop_codon	28411..28413(-),28082..28084(-),28097..28099(-)	28208,28227,28060	WP_004188492.1	heme ABC transporter ATP-binding protein	62.0	22.8	54.8
MGA_462	LOCUS_04610	sequence011:28633..28887(-)	frameshift		28976,28912,29037	WP_004187546.1	iron ABC transporter permease	96.4	21.7	69.1
MGA_466	LOCUS_04650	sequence012:3324..3623(+)	frameshift,internal_stop_codon	3893..3895(+)	3313,3461,3834,3434,3597	WP_004550186.1	M3 family metallopeptidase	91.9	13.0	45.1
MGA_467	LOCUS_04660	sequence012:4020..4289(+)	frameshift,internal_stop_codon	4305..4307(+),4019..4021(+),3893..3895(+)	3952,3858,3916,4285	WP_004550186.1	M3 family metallopeptidase	98.9	12.6	64.8
MGA_469	LOCUS_04680	sequence012:5880..6146(-)	frameshift,internal_stop_codon	5928..5930(-),5799..5801(-)	5768,6367,5939,6319	WP_037398234.1	efflux RND transporter permease subunit	79.5	6.7	71.4
MGA_470	LOCUS_04690	sequence012:6746..7054(-)	frameshift		7067	WP_064255119.1	efflux RND transporter periplasmic adaptor subunit	63.7	19.5	38.5
MGA_471	LOCUS_04700	sequence012:7029..7397(-)	frameshift,internal_stop_codon	7473..7475(-),6827..6829(-)	7491,7067,6853	WP_003810338.1	efflux RND transporter periplasmic adaptor subunit	96.7	28.5	49.2
MGA_473	LOCUS_04720	sequence012:7934..8650(-)	frameshift,internal_stop_codon	8681..8683(-),8143..8145(-),7933..7935(-)	8200,8732,8085	WP_011817216.1	outer membrane channel protein TolC	98.7	50.5	25.9
MGA_482	LOCUS_04810	sequence012:18388..18837(+)	frameshift,internal_stop_codon	18915..18917(+),19044..19046(+),18340..18342(+),18246..18248(+),18945..18947(+)	18290,18534,19094,18583,18139,18829	WP_004196600.1	3-(methylthio)propionyl-CoA ligase	94.6	26.1	50.0
MGA_483	LOCUS_04820	sequence012:19140..19337(+)	frameshift,internal_stop_codon	18944..18946(+),19043..19045(+),19137..19139(+),19335..19337(+),18914..18916(+),19461..19463(+)	19093	WP_004539668.1	3-(methylthio)propionyl-CoA ligase	100.0	11.7	56.9
MGA_491	LOCUS_04900	sequence012:26765..26980(-)	frameshift,internal_stop_codon	27082..27084(-),26598..26600(-),27004..27006(-)	26772,27165,26700	WP_015039421.1	malonyl-CoA synthase	97.2	16.4	60.7
MGA_492	LOCUS_04910	sequence012:27079..27516(-)	frameshift,internal_stop_codon	27082..27084(-),27004..27006(-)	27331,27165	WP_015064005.1	malonyl-CoA synthase	37.9	10.7	69.1
MGA_495	LOCUS_04930	sequence013:327..590(+)	frameshift,internal_stop_codon	269..271(+)	256,295	WP_004187998.1	Lrp/AsnC family transcriptional regulator	70.1	34.9	44.3
MGA_497	LOCUS_04950	sequence013:1090..1506(+)	frameshift,internal_stop_codon	1505..1507(+)	1678,1332,1398	WP_004194094.1	class II glutamine amidotransferase	99.3	46.7	43.8
MGA_498	LOCUS_04960	sequence013:1673..1828(+)	frameshift,internal_stop_codon	1504..1506(+)	1674,1397	WP_014205980.1	class II glutamine amidotransferase	88.2	16.0	60.0
MGA_511	LOCUS_05090	sequence013:14329..14568(-)	partial			WP_010974232.1	IS21-like element helper ATPase IstB	62.0	19.0	61.2
MGA_512	LOCUS_05100	sequence013:14831..15082(+)	frameshift,internal_stop_codon	15186..15188(+)	15031	WP_003815184.1	septal ring lytic transglycosylase RlpA family protein	78.3	20.6	46.2
MGA_514	LOCUS_05120	sequence013:17120..17416(-)	partial			WP_011038214.1	pilin	68.4	45.9	58.2
MGA_520	LOCUS_05180	sequence013:24412..24783(+)	frameshift,internal_stop_codon	24781..24783(+),24339..24341(+)	24419,24660	WP_004531229.1	sugar ABC transporter substrate-binding protein	97.6	45.6	49.3
MGA_521	LOCUS_05190	sequence013:24793..25080(+)	frameshift,internal_stop_codon	24781..24783(+)	24660	WP_004531229.1	sugar ABC transporter substrate-binding protein	96.8	29.7	67.4
MGA_522	LOCUS_05200	sequence013:25373..25555(+)	frameshift,internal_stop_codon	25553..25555(+),25782..25784(+),25589..25591(+)	25633,25727	WP_011205086.1	sugar ABC transporter ATP-binding protein	96.7	11.1	60.3
MGA_523	LOCUS_05210	sequence013:26648..26863(+)	frameshift		26619	WP_003111272.1	sugar ABC transporter ATP-binding protein	67.6	9.4	58.3
MGA_524	LOCUS_05220	sequence014:251..631(+)	frameshift		207	WP_015064803.1	glutamate synthase-related protein	96.0	7.7	77.0
MGA_526	LOCUS_05240	sequence014:1483..1794(-)	frameshift,internal_stop_codon	2001..2003(-),1794..1796(-),1504..1506(-),1397..1399(-),2034..2036(-)	1988,1549,1574,1655	WP_004550116.1	cysteine synthase CysM	77.7	27.0	47.6
MGA_527	LOCUS_05250	sequence014:1795..1986(-)	frameshift,internal_stop_codon	1794..1796(-),2034..2036(-),2001..2003(-)	1988,1549,1574,1655	WP_004532363.1	cysteine synthase CysM	98.4	22.0	60.6
MGA_534	LOCUS_05320	sequence014:10054..10578(-)	frameshift,internal_stop_codon	10582..10584(-)	10536,10437,10621	WP_003118645.1	DEAD/DEAH box helicase	100.0	25.8	55.2
MGA_535	LOCUS_05330	sequence014:10601..10963(-)	frameshift,internal_stop_codon	10991..10993(-),10582..10584(-)	10621,11030	WP_011267302.1	DEAD/DEAH box helicase	49.2	6.5	61.0
MGA_537	LOCUS_05350	sequence014:12126..13466(-)	internal_stop_codon	13707..13709(-)		WP_004188897.1	3-phosphoshikimate 1-carboxyvinyltransferase	95.5	56.9	63.7
MGA_538	LOCUS_05360	sequence014:14045..14260(-)	partial			WP_003115433.1	histidinol-phosphate transaminase	87.3	16.8	40.3
MGA_539	LOCUS_05370	sequence014:14322..14777(-)	internal_stop_codon	14796..14798(-)		WP_004190098.1	prephenate dehydratase	98.7	41.4	66.4
MGA_540	LOCUS_05380	sequence014:14796..15041(-)	frameshift,internal_stop_codon	14794..14796(-)	15240,15051	WP_004190098.1	prephenate dehydratase	96.3	21.7	64.1
MGA_541	LOCUS_05390	sequence014:14984..15238(-)	frameshift,internal_stop_codon	14794..14796(-)	15243,15051	WP_003689394.1	prephenate dehydratase	79.8	17.3	46.3
MGA_552	LOCUS_05500	sequence014:25159..25866(+)	frameshift,internal_stop_codon	25878..25880(+),25149..25151(+),25866..25868(+)	25160,25019,25943	WP_011205370.1	DUF748 domain-containing protein	100.0	18.9	41.2
MGA_556	LOCUS_05540	sequence015:1747..2526(-)	frameshift,internal_stop_codon	1767..1769(-),1659..1661(-)	2064,2024,1859,1589	WP_004205394.1	TonB-dependent receptor	88.4	33.8	36.2
MGA_559	LOCUS_05570	sequence015:4526..4807(-)	partial			WP_004199061.1	GTP-binding protein	55.9	14.5	75.0
MGA_571	LOCUS_05690	sequence015:17854..18342(+)	frameshift,internal_stop_codon	18358..18360(+),18496..18498(+),18379..18381(+)	18609,17882,18315,18534	WP_015038714.1	adenosylhomocysteinase	87.0	30.1	58.5
MGA_572	LOCUS_05700	sequence015:18585..18971(+)	frameshift,internal_stop_codon	18378..18380(+),18495..18497(+),18970..18972(+),18357..18359(+)	18611,18533	WP_010942520.1	adenosylhomocysteinase	91.4	24.6	73.5
MGA_573	LOCUS_05710	sequence015:18972..19202(+)	internal_stop_codon	18969..18971(+)		WP_010942520.1	adenosylhomocysteinase	100.0	16.0	65.8
MGA_575	LOCUS_05730	sequence015:20122..20577(+)	frameshift		19969,20132,19926	WP_004198631.1	methylenetetrahydrofolate reductase [NAD(P)H]	70.2	38.4	57.5
MGA_579	LOCUS_05770	sequence015:22213..22404(+)	frameshift,internal_stop_codon	22184..22186(+),22527..22529(+)	22121,22366,21989,22173	WP_004197235.1	lytic transglycosylase domain-containing protein	81.0	7.8	52.9
MGA_592	LOCUS_05900	sequence016:8907..9104(-)	partial			WP_164925630.1	IS3-like element ISSod2 family transposase	84.6	15.4	58.2
MGA_593	LOCUS_05910	sequence016:9243..9431(+)	frameshift,internal_stop_codon	9207..9209(+),9546..9548(+),9613..9615(+),9429..9431(+)	9675,9590	WP_004201276.1	ABC transporter permease	100.0	22.0	71.0
MGA_594	LOCUS_05920	sequence016:9552..9926(+)	frameshift,internal_stop_codon	9546..9548(+),9613..9615(+),9429..9431(+)	9675,9590	WP_004201276.1	ABC transporter permease	76.6	38.3	38.0
MGA_606	LOCUS_06040	sequence016:21966..22211(+)	frameshift,internal_stop_codon	21676..21678(+),21952..21954(+),21955..21957(+)	21873	WP_000074531.1	alanine transaminase AlaA	100.0	22.5	53.8
MGA_614	LOCUS_06120	sequence017:9564..9971(-)	partial			WP_011707827.1	glycosyltransferase family 8 protein	98.5	34.4	32.8
MGA_616	LOCUS_06140	sequence017:11768..12118(-)	frameshift		12104	WP_001226290.1	Maf family protein	94.8	57.6	47.3
MGA_619	LOCUS_06170	sequence017:12919..13548(-)	partial			WP_004185806.1	ribosome silencing factor	54.5	74.0	74.6
MGA_623	LOCUS_06210	sequence017:16787..16924(-)	frameshift,internal_stop_codon	16786..16788(-),16924..16926(-)	16989	WP_010930861.1	YebC/PmpR family DNA-binding transcriptional regulator	95.6	17.7	67.4
MGA_624	LOCUS_06220	sequence017:17262..17477(+)	frameshift,internal_stop_codon	17647..17649(+)	17450	WP_001294559.1	DUF853 domain-containing protein	80.3	11.8	62.7
MGA_625	LOCUS_06230	sequence017:17437..17649(+)	frameshift,internal_stop_codon	17647..17649(+)	17745,17450	WP_011706587.1	DUF853 family protein	97.1	13.5	70.6
MGA_626	LOCUS_06240	sequence017:17783..18172(+)	frameshift,internal_stop_codon	17647..17649(+)	17736	WP_050298776.1	DUF853 family protein	93.8	24.3	70.5
MGA_630	LOCUS_06280	sequence017:19907..20698(-)	frameshift,internal_stop_codon	20700..20702(-),19905..19907(-)	20760,20883,20829	WP_003114272.1	FAD-dependent oxidoreductase	99.6	56.6	58.9
MGA_631	LOCUS_06290	sequence017:21723..22094(-)	frameshift		22051,21829,22358	WP_004194628.1	phosphonoacetaldehyde dehydrogenase	61.8	15.7	67.1
MGA_632	LOCUS_06300	sequence017:22406..22714(-)	partial			WP_004194696.1	phosphonoacetate hydrolase	72.5	18.2	50.7
MGA_633	LOCUS_06310	sequence017:23233..23463(+)	frameshift,internal_stop_codon	23567..23569(+)	23434,23230	WP_003112368.1	2-aminoethylphosphonate--pyruvate transaminase	82.9	24.5	38.5
MGA_637	LOCUS_06350	sequence018:3121..3555(-)	frameshift,internal_stop_codon	3711..3713(-),3738..3740(-),3705..3707(-)	2912,3186,3020,3071	WP_003098233.1	PLP-dependent aminotransferase family protein	50.7	15.9	42.5
MGA_640	LOCUS_06380	sequence018:5654..5827(+)	frameshift,internal_stop_codon	5825..5827(+),6066..6068(+),5897..5899(+)	5989	WP_010944019.1	low specificity L-threonine aldolase	89.5	14.5	56.9
MGA_646	LOCUS_06440	sequence018:12898..13110(-)	frameshift,internal_stop_codon	12841..12843(-),13129..13131(-)	12933	WP_004186167.1	VWA domain-containing protein	84.3	15.3	70.0
MGA_647	LOCUS_06450	sequence018:13129..13503(-)	frameshift,internal_stop_codon	12841..12843(-),13129..13131(-)	12933	WP_004186167.1	VWA domain-containing protein	98.4	34.8	57.4
MGA_649	LOCUS_06470	sequence018:14410..14835(-)	partial			WP_004543933.1	DUF1841 family protein	95.0	73.2	61.9
MGA_653	LOCUS_06510	sequence018:16959..17162(-)	internal_stop_codon	17346..17348(-),16959..16961(-),17232..17234(-),17178..17180(-)		WP_010931549.1	polyhydroxyalkanoate depolymerase	100.0	16.5	59.7
MGA_654	LOCUS_06520	sequence018:18723..18893(+)	partial			WP_003110747.1	GMC family oxidoreductase	75.0	7.1	78.6
MGA_656	LOCUS_06540	sequence018:20620..20967(+)	frameshift,internal_stop_codon	20558..20560(+)	20533	WP_172607919.1	c-type cytochrome	71.3	27.4	57.3
MGA_657	LOCUS_06550	sequence018:21066..21470(-)	frameshift		21202,21236	WP_003703604.1	OmpA family protein	96.3	57.8	35.3
MGA_680	LOCUS_06770	sequence019:19643..21022(+)	partial			WP_011204185.1	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	98.3	70.2	39.9
MGA_685	LOCUS_06800	sequence020:1085..1891(+)	partial			WP_015040642.1	ABC transporter substrate-binding protein	50.4	24.9	38.5
MGA_693	LOCUS_06880	sequence020:11864..12238(-)	partial			WP_010974232.1	IS21-like element helper ATPase IstB	90.3	62.3	42.0
MGA_695	LOCUS_06900	sequence020:13155..13805(-)	partial			WP_011706995.1	SDR family oxidoreductase	83.3	60.9	30.6
MGA_699	LOCUS_06940	sequence020:17562..17918(+)	partial			WP_011267101.1	nitroreductase family protein	93.2	55.8	56.4
MGA_700	LOCUS_06950	sequence020:17870..18175(-)	frameshift,internal_stop_codon	18183..18185(-)	18167	WP_003812167.1	DMT family transporter	76.2	25.0	50.6
MGA_701	LOCUS_06960	sequence020:18183..18584(-)	frameshift,internal_stop_codon	18183..18185(-),18585..18587(-)	18167	WP_003812167.1	DMT family transporter	98.5	52.9	39.9
MGA_702	LOCUS_06970	sequence020:19061..19354(-)	frameshift,internal_stop_codon	19061..19063(-)	19048	WP_004197673.1	phosphohistidine phosphatase SixA	100.0	64.5	33.7
MGA_703	LOCUS_06980	sequence020:19451..19813(-)	internal_stop_codon	19817..19819(-)		WP_004192053.1	polyphosphate kinase 1	98.3	17.6	52.9
MGA_704	LOCUS_06990	sequence020:19817..20209(-)	frameshift,internal_stop_codon	19814..19816(-),20216..20218(-)	20401,20323,20158	WP_010950968.1	polyphosphate kinase 1	88.5	16.1	44.3
MGA_706	LOCUS_07010	sequence020:21724..21996(+)	frameshift,internal_stop_codon	21996..21998(+)	21560,21692,21485,22142	WP_004188376.1	acetate--CoA ligase	100.0	14.8	59.2
MGA_715	LOCUS_07100	sequence021:13018..13209(+)	frameshift,internal_stop_codon	13408..13410(+)	13203	WP_010974232.1	IS21-like element helper ATPase IstB	95.2	23.8	63.3
MGA_716	LOCUS_07110	sequence021:13218..13409(+)	frameshift,internal_stop_codon	13408..13410(+)	13203	WP_010974232.1	IS21-like element helper ATPase IstB	100.0	25.0	55.6
MGA_719	LOCUS_07140	sequence021:16621..16905(+)	partial			WP_015065123.1	CoA transferase subunit A	100.0	40.5	72.3
MGA_721	LOCUS_07160	sequence021:17785..18090(+)	frameshift		18072,17734	WP_015039713.1	alpha/beta hydrolase	95.0	29.5	38.5
MGA_723	LOCUS_07180	sequence021:18325..18567(+)	internal_stop_codon	18565..18567(+)		WP_004526838.1	RidA family protein	100.0	68.4	58.8
MGA_725	LOCUS_07200	sequence022:535..858(-)	frameshift,internal_stop_codon	510..512(-),910..912(-)	624,274,383	WP_004522631.1	tetratricopeptide repeat protein	72.0	27.5	55.8
MGA_729	LOCUS_07240	sequence022:4221..4742(+)	frameshift,internal_stop_codon	4768..4770(+),4837..4839(+)	4128,4240,4978,4739,4923	WP_004187693.1	3-isopropylmalate dehydrogenase	96.0	46.8	66.3
MGA_738	LOCUS_07330	sequence022:9924..10181(+)	partial			WP_014207615.1	phosphoribosylanthranilate isomerase	90.6	34.7	48.1
MGA_739	LOCUS_07340	sequence022:10470..10610(+)	frameshift,internal_stop_codon	10608..10610(+),10698..10700(+),10899..10901(+),10407..10409(+)	10724	WP_010931555.1	tryptophan synthase subunit beta	100.0	11.5	69.6
MGA_740	LOCUS_07350	sequence022:10736..10900(+)	frameshift,internal_stop_codon	10608..10610(+),10698..10700(+),10899..10901(+)	11006,10727	WP_004528977.1	tryptophan synthase subunit beta	96.3	13.1	84.6
MGA_742	LOCUS_07370	sequence022:11328..11567(+)	frameshift,internal_stop_codon	11602..11604(+)	11595,11516	WP_004528976.1	tryptophan synthase subunit alpha	79.7	23.2	68.3
MGA_743	LOCUS_07380	sequence022:11628..12128(+)	frameshift,internal_stop_codon	11602..11604(+)	11595,11516	WP_004528976.1	tryptophan synthase subunit alpha	99.4	60.9	52.1
MGA_748	LOCUS_07430	sequence022:18025..18273(+)	frameshift,internal_stop_codon	18274..18276(+),18271..18273(+)	18059,18357	WP_010931523.1	cystathionine gamma-synthase family protein	96.3	19.1	50.6
MGA_749	LOCUS_07440	sequence022:19217..19507(-)	frameshift,internal_stop_codon	19078..19080(-)	19192,19252	WP_011103486.1	DUF799 domain-containing protein	84.4	36.8	51.9
MGA_750	LOCUS_07450	sequence023:572..943(-)	partial			WP_003808029.1	NADPH-dependent FMN reductase	95.1	56.4	47.0
MGA_756	LOCUS_07510	sequence023:7380..7772(-)	partial			WP_013094828.1	TetR/AcrR family transcriptional regulator	93.1	60.8	30.7
MGA_762	LOCUS_07570	sequence023:11558..11965(+)	frameshift,internal_stop_codon	11889..11891(+),11886..11888(+),11769..11771(+)	11969,11746	WP_004195200.1	LysE family translocator	47.4	33.0	45.3
MGA_765	LOCUS_07600	sequence023:14276..14455(+)	partial			WP_002217209.1	ISC system 2Fe-2S type ferredoxin	100.0	52.2	71.2
MGA_769	LOCUS_07640	sequence023:17763..17942(+)	frameshift		17915,18143	WP_004184803.1	LysR substrate-binding domain-containing protein	84.7	16.5	70.0
MGA_771	LOCUS_07660	sequence023:19266..19622(-)	frameshift,internal_stop_codon	19045..19047(-),19210..19212(-)	19237,19319	WP_011035570.1	LysR substrate-binding domain-containing protein	83.1	53.5	45.3
MGA_772	LOCUS_07670	sequence023:19752..19958(+)	frameshift		19940	WP_206819860.1	5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase	92.6	8.6	56.9
MGA_773	LOCUS_07680	sequence024:437..769(-)	frameshift,internal_stop_codon	794..796(-),436..438(-),874..876(-)	736,315,851,855,907,699	WP_003083599.1	MBL fold metallo-hydrolase	100.0	39.7	40.3
MGA_779	LOCUS_07740	sequence024:5239..5469(-)	partial			WP_050298429.1	LysR family transcriptional regulator	76.3	18.4	39.7
MGA_780	LOCUS_07750	sequence024:6947..7174(+)	frameshift,internal_stop_codon	6674..6676(+),7289..7291(+),7229..7231(+),6944..6946(+)	7423,6727,7135	WP_004533560.1	fumarylacetoacetase	84.0	14.5	74.6
MGA_782	LOCUS_07770	sequence024:10280..10435(-)	frameshift,internal_stop_codon	10078..10080(-),10529..10531(-),10279..10281(-)	10260,10471,10507,10188,10125	WP_004198971.1	serine/threonine protein kinase	96.1	14.0	57.1
MGA_788	LOCUS_07830	sequence024:13506..14474(+)	partial			WP_004555861.1	M48 family metallopeptidase	78.0	59.4	62.3
MGA_796	LOCUS_07900	sequence025:4509..5357(-)	internal_stop_codon	4509..4511(-)		WP_004188261.1	aldolase/citrate lyase family protein	98.9	82.3	51.4
MGA_817	LOCUS_08110	sequence026:8237..8608(-)	internal_stop_codon	8612..8614(-)		WP_164929042.1	GNAT family N-acetyltransferase	87.8	54.5	36.1
MGA_818	LOCUS_08120	sequence026:8903..9460(-)	frameshift,internal_stop_codon	9641..9643(-),9569..9571(-),9584..9586(-),9644..9646(-),9479..9481(-)	9689	WP_000010284.1	propionate--CoA ligase	90.3	26.0	64.7
MGA_819	LOCUS_08130	sequence026:9790..9924(-)	frameshift,internal_stop_codon	9567..9569(-),9639..9641(-),9582..9584(-),9955..9957(-),9642..9644(-)	9792,10042,9795,9687	WP_000010233.1	propionate--CoA ligase	97.7	6.8	83.7
MGA_820	LOCUS_08140	sequence026:10013..10543(-)	frameshift,internal_stop_codon	10506..10508(-),9955..9957(-)	9792,10042,9795,10463	WP_000010226.1	propionate--CoA ligase	77.3	21.5	58.1
MGA_822	LOCUS_08160	sequence026:12304..12483(-)	frameshift,internal_stop_codon	12493..12495(-),12553..12555(-),12050..12052(-)	12056,12243,12357	WP_004192209.1	nitrogen regulation protein NR(I)	72.9	8.4	83.7
MGA_823	LOCUS_08170	sequence026:12553..12789(-)	frameshift,internal_stop_codon	12493..12495(-),12553..12555(-),12868..12870(-)	12357	WP_004192209.1	nitrogen regulation protein NR(I)	100.0	15.3	67.9
MGA_824	LOCUS_08180	sequence026:13345..13524(-)	frameshift,internal_stop_codon	13560..13562(-),13221..13223(-),13299..13301(-),13134..13136(-),13344..13346(-)	13121,13667	WP_135202727.1	nitrogen regulation protein NR(II)	100.0	15.9	72.9
MGA_834	LOCUS_08280	sequence027:8874..9086(+)	frameshift,internal_stop_codon	9084..9086(+)	9218	WP_004266649.1	LysR family transcriptional regulator	94.3	22.0	68.2
MGA_836	LOCUS_08300	sequence027:9510..9734(+)	frameshift		9393,9502	WP_004266649.1	LysR family transcriptional regulator	91.9	29.0	41.4
MGA_839	LOCUS_08330	sequence027:11669..12079(-)	frameshift,internal_stop_codon	11653..11655(-),11572..11574(-),12086..12088(-)	12275,11710,11526	WP_015064805.1	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	82.4	30.4	75.9
MGA_840	LOCUS_08340	sequence027:12086..12271(-)	frameshift,internal_stop_codon	12086..12088(-)	12275	WP_004189192.1	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	100.0	16.6	83.6
MGA_841	LOCUS_08350	sequence027:12222..12410(-)	frameshift,internal_stop_codon	12086..12088(-)	12275	WP_004189192.1	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	98.4	16.6	70.5
MGA_845	LOCUS_08390	sequence028:355..561(+)	frameshift,internal_stop_codon	756..758(+),813..815(+),562..564(+),559..561(+),780..782(+)	585,654,695	WP_004185183.1	ABC transporter substrate-binding protein	66.2	11.3	60.0
MGA_847	LOCUS_08410	sequence028:1781..2152(+)	frameshift,internal_stop_codon	1757..1759(+)	1858,1611,1931	WP_004185119.1	branched-chain amino acid ABC transporter permease	100.0	41.8	62.4
MGA_848	LOCUS_08420	sequence028:2156..2485(+)	frameshift,internal_stop_codon	2554..2556(+),2521..2523(+),2617..2619(+),2713..2715(+)	2440,2706,2453,2751	WP_004195809.1	branched-chain amino acid ABC transporter permease	84.4	28.7	52.7
MGA_864	LOCUS_08580	sequence029:3321..3902(+)	internal_stop_codon	3276..3278(+)		WP_004186872.1	phosphoglycolate phosphatase	93.8	73.1	39.6
MGA_867	LOCUS_08610	sequence029:5949..6272(+)	frameshift,internal_stop_codon	6270..6272(+)	5917,6398	WP_002217365.1	anthranilate phosphoribosyltransferase	98.1	35.8	49.2
MGA_868	LOCUS_08620	sequence029:6276..6452(+)	frameshift,internal_stop_codon	6270..6272(+),6601..6603(+)	6398	WP_011035722.1	anthranilate phosphoribosyltransferase	70.7	11.9	70.7
MGA_869	LOCUS_08630	sequence029:6436..6603(+)	frameshift,internal_stop_codon	6270..6272(+),6601..6603(+)	6398	WP_011035722.1	anthranilate phosphoribosyltransferase	100.0	15.9	52.7
MGA_879	LOCUS_08730	sequence030:40..339(+)	internal_stop_codon	544..546(+),337..339(+)		WP_011086748.1	MFS transporter	53.5	10.7	56.6
MGA_891	LOCUS_08850	sequence030:12469..12663(-)	frameshift,internal_stop_codon	12685..12687(-)	12510	WP_003813314.1	CoA pyrophosphatase	75.0	19.9	56.2
MGA_899	LOCUS_08930	sequence031:3591..3857(-)	frameshift,internal_stop_codon	3861..3863(-)	4112,3623,4021,3951	WP_004188918.1	MFS transporter	88.6	19.7	56.5
MGA_903	LOCUS_08970	sequence031:6786..9494(+)	partial			WP_010968309.1	double-strand break repair protein AddB	56.9	51.1	23.6
MGA_908	LOCUS_09020	sequence031:14297..14599(-)	frameshift,internal_stop_codon	14297..14299(-)	14173	WP_003689749.1	basic amino acid ABC transporter substrate-binding protein	95.0	41.0	38.7
MGA_910	LOCUS_09040	sequence032:189..386(+)	frameshift		359	WP_000604912.1	IS200/IS605-like element IS609 family transposase	87.7	39.9	61.4
MGA_911	LOCUS_09050	sequence032:984..1388(+)	frameshift		905,939	WP_011027653.1	1,3,6,8-tetrahydroxynaphthalene synthase	86.6	31.0	48.3
MGA_912	LOCUS_09060	sequence032:1569..1982(+)	frameshift,internal_stop_codon	1390..1392(+)	1554,1974,1434	WP_004192117.1	nitrite/sulfite reductase	98.5	28.1	50.3
MGA_913	LOCUS_09070	sequence032:2090..2386(+)	internal_stop_codon	2384..2386(+)		WP_003088003.1	DUF934 domain-containing protein	58.2	39.4	41.5
MGA_914	LOCUS_09080	sequence032:2396..2581(+)	internal_stop_codon	2384..2386(+)		WP_005762572.1	DUF934 domain-containing protein	95.1	35.4	69.0
MGA_916	LOCUS_09100	sequence032:3155..3349(+)	internal_stop_codon	3134..3136(+),2948..2950(+),3008..3010(+)		WP_004565842.1	phosphoadenylyl-sulfate reductase	70.3	18.0	68.9
MGA_917	LOCUS_09110	sequence032:3401..3772(+)	frameshift		3865,3739,3862	WP_010930113.1	sulfate adenylyltransferase subunit CysD	78.9	32.1	68.0
MGA_918	LOCUS_09120	sequence032:3896..4327(+)	frameshift		3739,3868,3862	WP_010930113.1	sulfate adenylyltransferase subunit CysD	98.6	46.7	64.5
MGA_919	LOCUS_09130	sequence032:4327..4584(+)	internal_stop_codon	4582..4584(+),4861..4863(+)		WP_010928137.1	GTP-binding protein	81.2	16.0	65.2
MGA_920	LOCUS_09140	sequence032:4681..4863(+)	frameshift,internal_stop_codon	4582..4584(+),4861..4863(+),4978..4980(+),4915..4917(+)	5118	WP_004522575.1	GTP-binding protein	100.0	13.5	58.3
MGA_921	LOCUS_09150	sequence032:5090..5674(+)	frameshift,internal_stop_codon	4861..4863(+),4978..4980(+),4915..4917(+)	5136,5163	WP_003110029.1	sulfate adenylyltransferase subunit CysN	78.9	24.2	41.2
MGA_923	LOCUS_09170	sequence032:6226..6480(+)	partial			WP_004197988.1	SCO family protein	83.3	34.1	50.7
MGA_928	LOCUS_09220	sequence032:12108..13064(-)	internal_stop_codon	12108..12110(-)		WP_015064692.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	91.2	65.1	47.6
MGA_929	LOCUS_09230	sequence032:13208..13699(-)	frameshift		13222	WP_004189288.1	LysE family translocator	41.7	32.7	39.1
MGA_934	LOCUS_09270	sequence033:178..726(+)	partial			WP_010940876.1	xanthine dehydrogenase family protein molybdopterin-binding subunit	85.2	21.4	46.5
MGA_941	LOCUS_09340	sequence033:6549..6749(-)	frameshift,internal_stop_codon	6786..6788(-)	6398,6885,6982,6551	WP_004193660.1	YihY family inner membrane protein	100.0	15.1	51.5
MGA_945	LOCUS_09380	sequence033:8669..9058(+)	frameshift,internal_stop_codon	9056..9058(+)	8730,9085	WP_004191226.1	FAD-binding oxidoreductase	99.2	27.3	48.5
MGA_946	LOCUS_09390	sequence033:9046..9573(+)	frameshift,internal_stop_codon	9056..9058(+)	9070	WP_010931317.1	FAD-binding oxidoreductase	79.4	29.5	49.6
MGA_951	LOCUS_09440	sequence033:13523..13804(+)	frameshift,internal_stop_codon	13802..13804(+)	13485	WP_010888753.1	ABC transporter substrate-binding protein	96.8	23.5	44.0
MGA_957	LOCUS_09500	sequence034:1763..1918(+)	partial			WP_004522419.1	2-isopropylmalate synthase	84.3	8.3	67.4
MGA_958	LOCUS_09510	sequence034:2995..3291(-)	frameshift,internal_stop_codon	2985..2987(-),2994..2996(-)	3411,3357	WP_004191674.1	cystine ABC transporter substrate-binding protein	99.0	36.7	48.5
MGA_959	LOCUS_09520	sequence034:3373..3612(-)	frameshift		3411,3357,3574	WP_004191674.1	cystine ABC transporter substrate-binding protein	68.4	19.7	57.4
MGA_968	LOCUS_09610	sequence034:12964..13353(+)	frameshift,internal_stop_codon	13351..13353(+)	12985	WP_011205139.1	chromosome segregation protein SMC	93.0	10.1	41.9
MGA_969	LOCUS_09620	sequence034:13360..13710(+)	frameshift,internal_stop_codon	13351..13353(+),13708..13710(+)	13959,13919	WP_114484320.1	chromosome segregation protein SMC	99.1	9.8	36.5
MGA_970	LOCUS_09630	sequence034:14147..14524(+)	frameshift,internal_stop_codon	14132..14134(+)	13956,14470,13919	WP_004198894.1	chromosome segregation protein SMC	88.0	9.4	81.8
MGA_1022	LOCUS_10150	sequence038:406..813(+)	frameshift		726	WP_004527766.1	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase	80.0	21.4	74.1
MGA_1023	LOCUS_10160	sequence038:714..1721(+)	frameshift		726	WP_004527766.1	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase	97.3	69.4	55.2
MGA_1029	LOCUS_10220	sequence038:7040..7372(+)	frameshift,internal_stop_codon	7370..7372(+)	7637,7471	WP_003814960.1	monofunctional biosynthetic peptidoglycan transglycosylase	94.5	44.6	42.6
MGA_1030	LOCUS_10230	sequence038:7494..7676(+)	frameshift,internal_stop_codon	7683..7685(+),7370..7372(+)	7637,7471	WP_003814960.1	monofunctional biosynthetic peptidoglycan transglycosylase	80.0	19.8	66.7
MGA_1035	LOCUS_10280	sequence038:11963..12142(+)	partial			WP_002116220.1	response regulator	91.5	45.0	46.3
MGA_1042	LOCUS_10340	sequence039:2355..2825(+)	frameshift,internal_stop_codon	2222..2224(+)	2317	WP_011104393.1	DNA oxidative demethylase AlkB	84.0	57.5	51.1
MGA_1044	LOCUS_10360	sequence039:6042..6302(-)	frameshift		6059,6021,6031	WP_015039539.1	carbon-nitrogen hydrolase family protein	45.3	14.1	69.2
MGA_1054	LOCUS_10460	sequence040:2947..3165(-)	internal_stop_codon	2857..2859(-),2773..2775(-),2740..2742(-),2947..2949(-)		WP_000981879.1	LytTR family DNA-binding domain-containing protein	95.8	26.4	39.1
MGA_1059	LOCUS_10510	sequence040:7329..7754(-)	frameshift,internal_stop_codon	7280..7282(-)	7403	WP_004189415.1	DUF2889 domain-containing protein	75.2	52.7	40.7
MGA_1064	LOCUS_10560	sequence040:11153..11329(-)	frameshift,internal_stop_codon	11153..11155(-)	11321	WP_004200763.1	response regulator transcription factor	94.8	22.3	70.9
MGA_1067	LOCUS_10590	sequence041:1202..1666(-)	frameshift,internal_stop_codon	1054..1056(-),1202..1204(-)	1084	WP_013530347.1	alpha-hydroxy acid oxidase	99.4	50.1	50.3
MGA_1071	LOCUS_10630	sequence041:6628..6813(+)	frameshift,internal_stop_codon	6570..6572(+),6811..6813(+)	6638	WP_004197812.1	CreA family protein	91.8	35.2	58.6
MGA_1078	LOCUS_10700	sequence042:1400..1780(+)	partial			WP_004192516.1	TatD family hydrolase	77.8	37.0	49.0
MGA_1086	LOCUS_10780	sequence042:7097..7468(-)	frameshift,internal_stop_codon	7639..7641(-),7684..7686(-),7048..7050(-),7474..7476(-),7039..7041(-),7504..7506(-)	7104,6900,7668,7071	WP_004535538.1	isovaleryl-CoA dehydrogenase	98.4	22.7	56.7
MGA_1094	LOCUS_10850	sequence043:192..527(-)	internal_stop_codon	531..533(-)		WP_011971012.1	IS21-like element helper ATPase IstB	62.2	28.3	49.3
MGA_1095	LOCUS_10860	sequence043:930..1172(-)	partial			WP_164925630.1	IS3-like element ISSod2 family transposase	87.5	19.6	60.0
MGA_1100	LOCUS_10910	sequence043:8225..8443(-)	frameshift,internal_stop_codon	8552..8554(-),8468..8470(-)	8227,8573	WP_000051613.1	muramoyltetrapeptide carboxypeptidase	93.1	22.0	64.2
MGA_1107	LOCUS_10980	sequence043:12302..12538(+)	frameshift,internal_stop_codon	12199..12201(+),12295..12297(+),12121..12123(+),12148..12150(+),12181..12183(+)	12270,12279	WP_011036476.1	cryptochrome/photolyase family protein	87.2	13.6	54.2
MGA_1147	LOCUS_11370	sequence047:414..677(-)	frameshift,internal_stop_codon	925..927(-),693..695(-),414..416(-)	392,786	WP_003112722.1	type II secretion system ATPase GspE	98.9	18.3	65.1
MGA_1148	LOCUS_11380	sequence047:1858..2049(-)	frameshift,internal_stop_codon	1858..1860(-)	2050,2219	WP_011070563.1	type II secretion system secretin GspD	98.4	8.8	46.8
MGA_1164	LOCUS_11540	sequence047:12186..12638(+)	frameshift,internal_stop_codon	12736..12738(+),12550..12552(+)	12187,12660,12479	WP_011391540.1	molybdopterin-synthase adenylyltransferase MoeB	67.3	37.6	52.0
MGA_1166	LOCUS_11560	sequence048:704..862(-)	partial			WP_011087787.1	sodium-translocating pyrophosphatase	92.3	6.8	52.1
MGA_1171	LOCUS_11610	sequence048:4132..4467(-)	partial			WP_003812889.1	MotA/TolQ/ExbB proton channel family protein	64.0	36.4	42.7
MGA_1173	LOCUS_11630	sequence048:5863..6063(-)	frameshift,internal_stop_codon	6071..6073(-)	6064	WP_010971581.1	transporter substrate-binding domain-containing protein	92.4	23.4	68.9
MGA_1174	LOCUS_11640	sequence048:6071..6496(-)	frameshift,internal_stop_codon	5863..5865(-)	6079	WP_064244023.1	transporter substrate-binding domain-containing protein	98.6	64.8	51.5
MGA_1178	LOCUS_11680	sequence048:8717..9502(+)	internal_stop_codon	9500..9502(+)		WP_004193146.1	fused uroporphyrinogen-III synthase HemD/membrane protein HemX	95.0	39.5	45.4
MGA_1183	LOCUS_11730	sequence049:3590..3952(-)	internal_stop_codon	3953..3955(-)		WP_014206317.1	RNA polymerase factor sigma-70	76.7	45.6	42.6
MGA_1185	LOCUS_11750	sequence049:4157..4693(+)	frameshift,internal_stop_codon	4779..4781(+),4658..4660(+)	4853,4570,4756,4573	WP_004522867.1	DNA-binding protein YbiB	81.5	46.3	38.3
MGA_1195	LOCUS_11850	sequence050:4307..4558(-)	partial			WP_003816026.1	ribonuclease P protein component	89.2	58.5	48.7
MGA_1201	LOCUS_11910	sequence051:803..1234(+)	frameshift,internal_stop_codon	1233..1235(+)	1099,1292,1189	WP_004535007.1	class I SAM-dependent methyltransferase	95.8	40.5	43.0
MGA_1202	LOCUS_11920	sequence051:1242..1544(+)	frameshift,internal_stop_codon	1233..1235(+),1760..1762(+)	1105,1192,1292,1693,1518	WP_004535007.1	class I SAM-dependent methyltransferase	82.0	23.0	52.8
MGA_1203	LOCUS_11930	sequence051:2071..2295(-)	frameshift,internal_stop_codon	2526..2528(-),2426..2428(-),2317..2319(-)	2404,2453	WP_004195471.1	metallophosphoesterase	86.5	16.0	45.3
MGA_1205	LOCUS_11950	sequence051:5629..5958(+)	frameshift,internal_stop_codon	6124..6126(+),5956..5958(+)	6021	WP_004551493.1	MASE1 domain-containing protein	89.9	22.8	43.9
MGA_1214	LOCUS_12030	sequence052:1830..2174(-)	frameshift		2131,1896,1739,1900,1871	WP_004529393.1	carbon starvation CstA family protein	83.3	13.3	64.2
MGA_1215	LOCUS_12040	sequence052:2519..2830(+)	frameshift,internal_stop_codon	2828..2830(+)	2944,3067	WP_004198278.1	cache domain-containing protein	89.3	20.6	45.8
MGA_1234	LOCUS_12230	sequence053:8353..8535(+)	frameshift,internal_stop_codon	8573..8575(+)	8363,8502	WP_003147398.1	multidrug efflux RND transporter permease subunit MexN	83.3	4.8	48.0
MGA_1235	LOCUS_12240	sequence053:8585..8773(+)	frameshift,internal_stop_codon	8573..8575(+)	8499	WP_011086679.1	multidrug efflux RND transporter permease subunit	75.8	4.5	53.2
MGA_1236	LOCUS_12250	sequence053:8719..9225(+)	frameshift,internal_stop_codon	9223..9225(+),8573..8575(+)	8502,9234,9318	WP_011083109.1	efflux RND transporter permease subunit	98.2	16.2	41.5
MGA_1237	LOCUS_12260	sequence053:9943..10344(+)	frameshift		10305,10372	WP_005764042.1	heavy metal response regulator transcription factor	91.0	53.8	62.0
MGA_1238	LOCUS_12270	sequence053:10378..10617(+)	frameshift		10305,10378	WP_004406637.1	heavy metal response regulator transcription factor	100.0	35.1	70.9
MGA_1243	LOCUS_12320	sequence054:2686..3966(-)	partial			WP_004186398.1	mechanosensitive ion channel	79.1	74.9	42.2
MGA_1244	LOCUS_12330	sequence054:4215..4571(-)	frameshift,internal_stop_codon	4214..4216(-),4671..4673(-)	4564,4309,4631	WP_011266574.1	phosphonate ABC transporter, permease protein PhnE	92.4	52.2	34.8
MGA_1249	LOCUS_12380	sequence054:8401..8799(-)	partial			WP_004194435.1	barstar family protein	99.2	70.1	65.6
MGA_1251	LOCUS_12400	sequence054:10654..11025(-)	frameshift,internal_stop_codon	11077..11079(-),11221..11223(-),11284..11286(-)	10736,10657,10904,10953,11241	WP_011038412.1	sodium-translocating pyrophosphatase	80.5	14.1	60.6
MGA_1253	LOCUS_12420	sequence054:11284..11448(-)	frameshift,internal_stop_codon	11077..11079(-),11220..11222(-),11283..11285(-)	11240,11447	WP_011389571.1	sodium-translocating pyrophosphatase	70.4	5.4	73.7
MGA_1255	LOCUS_12440	sequence055:48..233(-)	frameshift,internal_stop_codon	47..49(-)	241	WP_164925630.1	IS3-like element ISSod2 family transposase	100.0	17.0	63.9
MGA_1257	LOCUS_12460	sequence055:1791..2369(-)	partial			WP_004553813.1	lipoyl(octanoyl) transferase LipB	97.9	72.4	58.2
MGA_1261	LOCUS_12500	sequence055:4026..4313(-)	frameshift,internal_stop_codon	4321..4323(-)	4434,4389	WP_010929622.1	D-amino acid aminotransferase	96.8	30.8	58.7
MGA_1263	LOCUS_12520	sequence055:5878..6174(+)	frameshift,internal_stop_codon	5858..5860(+),5753..5755(+)	5953,5731,6149,5673,6013	WP_003114901.1	TonB-dependent receptor	45.9	6.2	55.6
MGA_1264	LOCUS_12530	sequence055:6299..6604(+)	frameshift,internal_stop_codon	6704..6706(+),6685..6687(+)	6699,6781	WP_003114902.1	PepSY domain-containing protein	44.6	9.6	63.8
MGA_1265	LOCUS_12540	sequence055:7367..7519(+)	partial			WP_012774893.1	DNA-3-methyladenine glycosylase I	84.0	22.2	57.1
MGA_1267	LOCUS_12560	sequence055:9110..9508(+)	partial			WP_004185598.1	16S rRNA pseudouridine(516) synthase	84.1	46.2	45.9
MGA_1269	LOCUS_12580	sequence056:144..314(-)	frameshift,internal_stop_codon	143..145(-)	353,305	WP_011268919.1	ABC transporter ATP-binding protein	94.6	13.7	71.7
MGA_1270	LOCUS_12590	sequence056:351..701(-)	partial			WP_003092985.1	ABC transporter permease	34.5	18.2	75.0
MGA_1271	LOCUS_12600	sequence056:923..1096(-)	frameshift		1125	WP_013096822.1	osmoprotectant ABC transporter substrate-binding protein OsmX	100.0	19.1	54.4
MGA_1272	LOCUS_12610	sequence056:1045..1371(-)	frameshift		1122	WP_011268920.1	glycine betaine ABC transporter substrate-binding protein	50.0	18.2	48.1
MGA_1279	LOCUS_12680	sequence056:9742..10011(+)	frameshift,internal_stop_codon	9901..9903(+),9907..9909(+),10006..10008(+),10024..10026(+),9895..9897(+),9688..9690(+)	9888	WP_011036696.1	AGE family epimerase/isomerase	52.8	11.7	59.6
MGA_1284	LOCUS_12730	sequence057:1786..2298(-)	frameshift		2297	WP_011126007.1	uroporphyrinogen-III C-methyltransferase	88.2	58.2	45.4
MGA_1288	LOCUS_12770	sequence057:3223..3453(-)	frameshift,internal_stop_codon	3234..3236(-),3653..3655(-)	3577,3255	WP_015705090.1	nitrate ABC transporter permease	86.8	22.4	68.2
MGA_1291	LOCUS_12800	sequence057:4625..4870(-)	frameshift,internal_stop_codon	4625..4627(-),4919..4921(-),4998..5000(-)	4579,4404,4982	WP_029882726.1	CmpA/NrtA family ABC transporter substrate-binding protein	100.0	20.0	51.8
MGA_1297	LOCUS_12860	sequence057:8372..8539(-)	frameshift,internal_stop_codon	8575..8577(-),8641..8643(-)	8652	WP_011389842.1	ABC transporter permease subunit	94.5	22.6	59.6
MGA_1299	LOCUS_12880	sequence057:8859..9272(-)	internal_stop_codon	9393..9395(-)		WP_011090326.1	amino acid ABC transporter permease	85.4	47.7	50.4
MGA_1301	LOCUS_12900	sequence057:9909..10070(-)	frameshift		9923	WP_011104894.1	glutamate/aspartate ABC transporter substrate-binding protein	90.6	15.6	54.2
MGA_1338	LOCUS_13240	sequence061:4852..5019(-)	frameshift,internal_stop_codon	5023..5025(-)	4771,4820,4638,4887	WP_011267713.1	MdtB/MuxB family multidrug efflux RND transporter permease subunit	67.3	3.6	75.7
MGA_1340	LOCUS_13260	sequence061:5633..6064(+)	frameshift,internal_stop_codon	5602..5604(+)	5625,5555,5941	WP_000907827.1	sn-glycerol 3-phosphate ABC transporter ATP binding protein UgpC	69.9	28.1	67.0
MGA_1342	LOCUS_13280	sequence061:7446..7775(-)	internal_stop_codon	7954..7956(-)		WP_003129868.1	CaiB/BaiF CoA-transferase family protein	72.5	18.8	48.8
MGA_1343	LOCUS_13290	sequence061:9592..9975(+)	frameshift		9921	WP_010931665.1	MdtB/MuxB family multidrug efflux RND transporter permease subunit	85.8	10.7	60.6
MGA_1344	LOCUS_13300	sequence061:9947..10138(+)	frameshift		9921	WP_003089920.1	multidrug efflux RND transporter permease subunit MuxB	93.7	5.8	57.4
MGA_1353	LOCUS_13390	sequence062:9941..10126(+)	frameshift,internal_stop_codon	10125..10127(+)	9932	WP_164925630.1	IS3-like element ISSod2 family transposase	100.0	17.0	57.4
MGA_1354	LOCUS_13400	sequence063:492..701(+)	frameshift,internal_stop_codon	699..701(+)	848,935,815	WP_011969984.1	3-hydroxyacyl-CoA dehydrogenase	95.7	25.9	62.1
MGA_1367	LOCUS_13530	sequence064:3915..4625(+)	partial			WP_004205123.1	DNA-3-methyladenine glycosylase	84.3	63.8	67.3
MGA_1375	LOCUS_13600	sequence065:1570..1881(+)	frameshift,internal_stop_codon	1402..1404(+),1552..1554(+)	1464,1725,1367,1759	WP_007246288.1	alkyl hydroperoxide reductase subunit F	91.3	20.8	60.2
MGA_1376	LOCUS_13610	sequence065:2025..2306(+)	frameshift		2344,1759	WP_004537660.1	alkyl hydroperoxide reductase subunit F	38.7	6.7	66.7
MGA_1383	LOCUS_13680	sequence066:822..1868(-)	frameshift,internal_stop_codon	791..793(-),674..676(-)	842,778,637	WP_004541285.1	bifunctional transcriptional regulator/glucokinase	94.0	50.9	57.8
MGA_1384	LOCUS_13690	sequence066:2250..2678(-)	frameshift,internal_stop_codon	2830..2832(-),2740..2742(-),2105..2107(-)	2688,2868,2071,2377,2263,2908	WP_004186165.1	glucose-6-phosphate dehydrogenase	39.4	11.0	48.2
MGA_1390	LOCUS_13750	sequence066:8313..8477(+)	frameshift,internal_stop_codon	8119..8121(+),8476..8478(+)	8139,8718,8535	WP_004533671.1	transaldolase	92.6	15.8	62.0
MGA_1392	LOCUS_13770	sequence066:9231..9419(-)	frameshift,internal_stop_codon	9420..9422(-),9135..9137(-)	9233	WP_004522850.1	formyltetrahydrofolate deformylase	100.0	23.2	64.7
MGA_1393	LOCUS_13780	sequence066:9420..9599(-)	frameshift,internal_stop_codon	9420..9422(-),9135..9137(-)	9233	WP_004195197.1	formyltetrahydrofolate deformylase	96.6	19.5	59.6
MGA_1418	LOCUS_14030	sequence069:6144..6503(+)	partial			WP_004522039.1	carbohydrate kinase family protein	93.3	35.3	54.1
MGA_1423	LOCUS_14080	sequence070:784..1077(+)	frameshift		760	WP_010931505.1	FAD-dependent oxidoreductase	88.7	19.6	46.5
MGA_1425	LOCUS_14100	sequence070:4398..4577(+)	frameshift,internal_stop_codon	4360..4362(+)	4365	WP_011036907.1	DedA family protein/thiosulfate sulfurtransferase GlpE	88.1	15.8	44.2
MGA_1432	LOCUS_14170	sequence071:6016..6414(-)	frameshift,internal_stop_codon	5913..5915(-)	6057	WP_003112844.1	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	70.5	48.4	55.3
MGA_1435	LOCUS_14200	sequence071:7068..7367(-)	frameshift,internal_stop_codon	7578..7580(-),7440..7442(-),7377..7379(-)	6880	WP_011266589.1	sigma-54 dependent transcriptional regulator	68.7	15.3	57.4
MGA_1436	LOCUS_14210	sequence071:7578..7745(-)	internal_stop_codon	7578..7580(-),7440..7442(-),7377..7379(-)		WP_011266589.1	sigma-54 dependent transcriptional regulator	100.0	12.4	47.3
MGA_1437	LOCUS_14220	sequence071:7851..8054(-)	internal_stop_codon	8109..8111(-)		WP_005762644.1	DUF1993 domain-containing protein	94.0	37.3	68.3
MGA_1438	LOCUS_14230	sequence071:8109..8360(-)	internal_stop_codon	8109..8111(-)		WP_003405482.1	DUF1993 domain-containing protein	100.0	49.1	63.9
MGA_1443	LOCUS_14280	sequence072:6332..6895(+)	partial			WP_004545914.1	C40 family peptidase	81.8	67.0	47.4
MGA_1449	LOCUS_14340	sequence073:1523..1762(+)	frameshift,internal_stop_codon	1516..1518(+),1826..1828(+),1319..1321(+),1760..1762(+)	1810,1524,1342,1855	WP_004526206.1	MFS transporter	93.7	13.4	62.2
MGA_1455	LOCUS_14400	sequence074:834..1064(-)	frameshift,internal_stop_codon	1086..1088(-),834..836(-)	1134	WP_003085498.1	enoyl-CoA hydratase	100.0	44.5	39.7
MGA_1457	LOCUS_14420	sequence074:1261..1608(-)	frameshift,internal_stop_codon	1748..1750(-)	1609	WP_011071829.1	acyl-CoA dehydrogenase family protein	100.0	42.1	50.3
MGA_1458	LOCUS_14430	sequence074:1743..1994(-)	frameshift,internal_stop_codon	1748..1750(-)	1609,1612	WP_015039867.1	acyl-CoA dehydrogenase family protein	71.1	15.6	54.8
MGA_1459	LOCUS_14440	sequence074:2187..2417(-)	frameshift,internal_stop_codon	2484..2486(-)	2672,2438	WP_011816758.1	fasciclin domain-containing protein	84.2	33.9	62.5
MGA_1460	LOCUS_14450	sequence074:3483..3743(+)	frameshift,internal_stop_codon	3792..3794(+)	3754,3857,3674,3732	WP_004196258.1	D-amino acid dehydrogenase	91.9	19.0	48.1
MGA_1465	LOCUS_14500	sequence075:410..562(+)	internal_stop_codon	566..568(+),743..745(+),560..562(+)		WP_202907611.1	TIGR03862 family flavoprotein	100.0	12.1	72.0
MGA_1467	LOCUS_14520	sequence075:1269..1583(+)	internal_stop_codon	1233..1235(+)		WP_007243792.1	TIGR03862 family flavoprotein	94.2	23.5	57.1
MGA_1473	LOCUS_14580	sequence075:6104..6478(-)	frameshift		6501	WP_004524740.1	peptidylprolyl isomerase	90.3	61.9	52.7
MGA_1479	LOCUS_14640	sequence076:3530..4048(+)	frameshift,internal_stop_codon	4046..4048(+)	3519	WP_004554622.1	c-type cytochrome biogenesis protein CcsB	99.4	43.2	64.9
MGA_1480	LOCUS_14650	sequence076:4049..4477(+)	internal_stop_codon	4046..4048(+)		WP_004197914.1	c-type cytochrome biogenesis protein CcsB	100.0	35.6	85.2
MGA_1482	LOCUS_14670	sequence076:5215..5478(+)	frameshift,internal_stop_codon	5095..5097(+),5569..5571(+),5476..5478(+)	5030	WP_004527906.1	protein-methionine-sulfoxide reductase catalytic subunit MsrP	98.9	26.0	58.1
MGA_1486	LOCUS_14710	sequence077:781..1017(+)	frameshift,internal_stop_codon	1195..1197(+)	1209,1178,1051,1014	WP_011204188.1	phenylalanine 4-monooxygenase	65.4	16.4	49.1
MGA_1488	LOCUS_14730	sequence077:2492..2944(+)	frameshift,internal_stop_codon	2942..2944(+)	2260,2423	WP_004197902.1	indolepyruvate ferredoxin oxidoreductase family protein	98.7	15.3	50.0
MGA_1489	LOCUS_14740	sequence077:3202..3486(+)	frameshift,internal_stop_codon	2942..2944(+),3761..3763(+)	3697,3607,3447	WP_015040578.1	indolepyruvate ferredoxin oxidoreductase family protein	88.3	6.8	67.5
MGA_1490	LOCUS_14750	sequence077:3452..3679(+)	frameshift,internal_stop_codon	3761..3763(+)	3697,3607,3447	WP_004197902.1	indolepyruvate ferredoxin oxidoreductase family protein	73.3	4.7	57.1
MGA_1491	LOCUS_14760	sequence077:3816..4214(+)	frameshift,internal_stop_codon	4212..4214(+),3761..3763(+)	4448,3697,3607	WP_011104408.1	indolepyruvate ferredoxin oxidoreductase family protein	59.1	6.7	46.2
MGA_1493	LOCUS_14780	sequence077:4689..4913(+)	frameshift		4448,4677,4687	WP_011035427.1	indolepyruvate ferredoxin oxidoreductase family protein	93.2	5.8	58.3
MGA_1498	LOCUS_14830	sequence077:8186..8437(+)	partial			WP_004196429.1	branched-chain amino acid ABC transporter substrate-binding protein	90.4	24.5	40.4
MGA_1499	LOCUS_14840	sequence078:431..1090(-)	frameshift,internal_stop_codon	1143..1145(-)	1070	WP_003112962.1	NRDE family protein	95.9	81.3	41.9
MGA_1507	LOCUS_14920	sequence079:8..193(-)	frameshift		201	WP_164925630.1	IS3-like element ISSod2 family transposase	100.0	17.0	60.7
MGA_1513	LOCUS_14980	sequence079:6489..6734(+)	frameshift,internal_stop_codon	6935..6937(+),7016..7018(+)	6943	WP_011266491.1	tRNA epoxyqueuosine(34) reductase QueG	72.8	16.3	47.5
MGA_1517	LOCUS_15020	sequence080:1139..1651(-)	frameshift,internal_stop_codon	1676..1678(-)	1528,1435	WP_011035436.1	lysophospholipid acyltransferase family protein	90.0	57.3	28.7
MGA_1525	LOCUS_15100	sequence081:671..1408(+)	partial			WP_200836485.1	4'-phosphopantetheinyl transferase superfamily protein	69.0	70.1	44.2
MGA_1532	LOCUS_15170	sequence081:5509..6129(+)	frameshift,internal_stop_codon	6238..6240(+)	6309	WP_087045357.1	alkaline phosphatase family protein	33.5	10.4	52.2
MGA_1535	LOCUS_15200	sequence082:3743..4165(-)	frameshift,internal_stop_codon	4273..4275(-)	4164	WP_003812548.1	fatty acid desaturase	99.3	34.3	57.9
MGA_1536	LOCUS_15210	sequence082:4273..4956(-)	frameshift,internal_stop_codon	4273..4275(-)	4164	WP_003812548.1	fatty acid desaturase	100.0	56.5	70.0
MGA_1540	LOCUS_15250	sequence083:3335..3577(+)	frameshift,internal_stop_codon	3272..3274(+),3239..3241(+)	3129,3053	WP_003814164.1	leucyl/phenylalanyl-tRNA--protein transferase	90.0	28.3	47.2
MGA_1541	LOCUS_15260	sequence083:4118..4360(+)	frameshift		3920,3977,4032	WP_004521637.1	arginyltransferase	95.0	27.5	42.1
MGA_1543	LOCUS_15280	sequence083:5576..6055(-)	frameshift,internal_stop_codon	6227..6229(-)	6178,6103	WP_000776223.1	HTH-type transcriptional regulator CysB	84.9	41.4	42.2
MGA_1544	LOCUS_15290	sequence083:6556..6867(+)	internal_stop_codon	6865..6867(+),7009..7011(+)		WP_064634437.1	histidine kinase	76.7	20.6	38.2
MGA_1545	LOCUS_15300	sequence084:537..752(-)	frameshift,internal_stop_codon	767..769(-)	916	WP_004185515.1	replication-associated recombination protein A	95.8	15.6	75.0
MGA_1547	LOCUS_15320	sequence084:1283..1582(-)	frameshift		1176,1098,1308,1581	WP_010947490.1	replication-associated recombination protein A	91.9	21.0	71.4
MGA_1559	LOCUS_15430	sequence085:6087..6341(-)	partial			WP_012061772.1	GlsB/YeaQ/YmgE family stress response membrane protein	66.7	67.5	60.7
MGA_1571	LOCUS_15550	sequence087:1836..2483(-)	frameshift,internal_stop_codon	2572..2574(-),1967..1969(-),1979..1981(-)	2225,2201,2068,2541	WP_003817018.1	phosphoenolpyruvate carboxykinase (GTP)	64.2	22.3	64.5
MGA_1572	LOCUS_15560	sequence087:3053..3391(+)	frameshift,internal_stop_codon	3419..3421(+)	3382	WP_004188904.1	D-2-hydroxyacid dehydrogenase family protein	100.0	33.1	56.2
MGA_1573	LOCUS_15570	sequence087:3457..3789(+)	frameshift,internal_stop_codon	3955..3957(+),3787..3789(+)	3822	WP_010930520.1	ABC transporter substrate-binding protein	64.5	24.7	62.2
MGA_1574	LOCUS_15580	sequence087:4278..4574(+)	frameshift,internal_stop_codon	4690..4692(+),4573..4575(+)	4266,4796	WP_003811003.1	ABC transporter permease	94.9	35.4	52.7
MGA_1577	LOCUS_15610	sequence087:5927..6376(+)	frameshift,internal_stop_codon	6592..6594(+),6375..6377(+)	6392,6001,6029	WP_004524498.1	branched-chain amino acid ABC transporter substrate-binding protein	96.0	39.6	42.4
MGA_1580	LOCUS_15640	sequence088:238..528(-)	frameshift,internal_stop_codon	688..690(-),607..609(-),628..630(-)	703	WP_004185539.1	ketol-acid reductoisomerase	87.5	24.9	78.6
MGA_1581	LOCUS_15650	sequence088:854..1171(+)	internal_stop_codon	827..829(+),1169..1171(+)		WP_004521226.1	LysR substrate-binding domain-containing protein	100.0	34.0	49.1
MGA_1582	LOCUS_15660	sequence088:1357..1596(-)	frameshift,internal_stop_codon	1692..1694(-),1356..1358(-),1641..1643(-)	1628	WP_003113836.1	NADH:flavin oxidoreductase/NADH oxidase	98.7	21.5	57.0
MGA_1583	LOCUS_15670	sequence088:1692..1859(-)	frameshift,internal_stop_codon	1692..1694(-),1641..1643(-)	1628	WP_003113836.1	NADH:flavin oxidoreductase/NADH oxidase	90.9	13.6	76.0
MGA_1585	LOCUS_15690	sequence088:4339..4623(+)	frameshift		4536	WP_011205453.1	L-histidine N(alpha)-methyltransferase	85.1	24.7	46.2
MGA_1588	LOCUS_15720	sequence088:5490..6149(+)	internal_stop_codon	6219..6221(+),6168..6170(+),6147..6149(+),5421..5423(+)		WP_003812990.1	ergothioneine biosynthesis protein EgtB	100.0	48.8	45.5
MGA_1589	LOCUS_15730	sequence088:6540..6779(-)	frameshift,internal_stop_codon	6388..6390(-),6800..6802(-)	6472,6984,6805,6541	WP_003113474.1	LysR substrate-binding domain-containing protein	100.0	25.1	40.5
MGA_1590	LOCUS_15740	sequence088:6773..7078(-)	partial			WP_003106096.1	LysR family transcriptional regulator	46.5	14.6	51.1
MGA_1602	LOCUS_15860	sequence090:4148..4501(+)	frameshift,internal_stop_codon	4733..4735(+),4613..4615(+),4673..4675(+)	4148,4519,4489,4762,4492	WP_004194932.1	pyridoxal phosphate-dependent aminotransferase	70.9	20.9	56.6
MGA_1604	LOCUS_15880	sequence090:5145..5342(+)	frameshift		5312	WP_010930981.1	fumarylacetoacetate hydrolase family protein	84.6	23.8	56.4
MGA_1605	LOCUS_15890	sequence090:5317..5679(+)	frameshift,internal_stop_codon	5677..5679(+)	5312	WP_011336836.1	fumarylacetoacetate hydrolase family protein	91.7	48.2	51.8
MGA_1618	LOCUS_16010	sequence092:3114..3326(-)	frameshift,internal_stop_codon	2934..2936(-),3355..3357(-),3052..3054(-),3112..3114(-)	3504,3324,3006	WP_015368121.1	acyl-CoA dehydrogenase FadE	97.1	8.4	64.7
MGA_1622	LOCUS_16050	sequence092:6030..6266(-)	partial			WP_004522636.1	methylated-DNA--[protein]-cysteine S-methyltransferase	94.9	47.1	62.2
MGA_1623	LOCUS_16060	sequence093:130..315(-)	frameshift,internal_stop_codon	342..344(-)	566	WP_010931559.1	thiazole synthase	93.4	21.5	66.7
MGA_1624	LOCUS_16070	sequence093:343..537(-)	frameshift,internal_stop_codon	342..344(-)	566	WP_003084517.1	thiazole synthase	96.9	23.4	59.7
MGA_1625	LOCUS_16080	sequence093:1901..2044(-)	frameshift,internal_stop_codon	1873..1875(-),2240..2242(-),1846..1848(-)	2116,1653,1912,2056,2041	WP_004193963.1	phosphomethylpyrimidine synthase ThiC	97.9	7.3	72.3
MGA_1635	LOCUS_16170	sequence094:3416..3772(+)	frameshift,internal_stop_codon	3338..3340(+)	3763,3788	WP_038966127.1	choline dehydrogenase	79.7	17.7	58.5
MGA_1636	LOCUS_16180	sequence094:3838..4143(+)	frameshift,internal_stop_codon	4148..4150(+)	3763,3788,4327,4119	WP_038966127.1	choline dehydrogenase	93.1	17.7	48.9
MGA_1645	LOCUS_16270	sequence096:2429..2677(-)	frameshift,internal_stop_codon	2324..2326(-),2429..2431(-),2417..2419(-)	2194	WP_010928863.1	ABC transporter ATP-binding protein	100.0	36.8	53.7
MGA_1649	LOCUS_16310	sequence097:2979..3377(+)	partial			WP_011174155.1	protein phosphatase 2C domain-containing protein	91.7	37.6	33.6
MGA_1650	LOCUS_16320	sequence097:3651..4238(-)	frameshift		3580,3671	WP_004192110.1	lipoprotein	81.0	65.1	28.2
MGA_1663	LOCUS_16440	sequence099:4219..4389(-)	frameshift,internal_stop_codon	4444..4446(-),4219..4221(-)	4149	WP_011268642.1	peptide deformylase	98.2	30.7	65.5
MGA_1665	LOCUS_16460	sequence100:401..691(-)	frameshift,internal_stop_codon	691..693(-),877..879(-)	873	WP_011090002.1	LemA family protein	96.9	46.0	60.2
MGA_1668	LOCUS_16490	sequence100:1970..2335(-)	internal_stop_codon	2384..2386(-)		WP_004194139.1	CinA family protein	86.0	62.7	52.9
MGA_1674	LOCUS_16550	sequence101:365..721(+)	frameshift,internal_stop_codon	719..721(+),922..924(+),864..866(+)	881,276,757	WP_003813559.1	ABC transporter ATP-binding protein	74.6	12.1	56.5
MGA_1675	LOCUS_16560	sequence101:1351..1524(+)	frameshift,internal_stop_codon	1522..1524(+),1756..1758(+)	1319	WP_003813559.1	ABC transporter ATP-binding protein	96.5	7.2	76.4
MGA_1676	LOCUS_16570	sequence101:2110..2379(+)	frameshift		2034,2118	WP_010928936.1	DUF1854 domain-containing protein	96.6	53.1	59.3
MGA_1677	LOCUS_16580	sequence101:2574..4367(-)	frameshift,internal_stop_codon	2573..2575(-)	3440,3422	WP_004197089.1	[protein-PII] uridylyltransferase	98.8	69.0	57.8
MGA_1682	LOCUS_16620	sequence102:2402..3046(-)	internal_stop_codon	3098..3100(-)		WP_003376398.1	Hsp70 family protein	66.8	34.7	61.0
MGA_1695	LOCUS_16740	sequence105:157..393(+)	frameshift,internal_stop_codon	394..396(+),391..393(+)	549	WP_004194236.1	anhydro-N-acetylmuramic acid kinase	97.4	19.6	53.9
