{ "type": "genome", "identifier": "GCA_020049495.1", "organism": "Candidatus Accumulibacter sp.", "title": "Candidatus Accumulibacter sp.", "description": "derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "University of Michigan", "publication": [ {} ], "properties": { "assembly_accession": "GCA_020049495.1", "bioproject": "PRJNA72255", "biosample": "SAMN20441918", "wgs_master": "JAIFKU000000000.1", "refseq_category": "na", "taxid": "2053492", "species_taxid": "2053492", "organism_name": "Candidatus Accumulibacter sp.", "infraspecific_name": "", "isolate": "bin_122", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/09/20", "asm_name": "ASM2004949v1", "submitter": "University of Michigan", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/020/049/495/GCA_020049495.1_ASM2004949v1", "excluded_from_refseq": "derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-09-20", "dateModified": "2021-09-20", "datePublished": "2021-09-20", "_annotation": { "sample_count": 1, "sample_organism": [ "Candidatus Accumulibacter sp." ], "sample_taxid": [ "2053492" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "USA: northwestern Lake Huron" ], "sample_host_location_id": [], "data_size": "0.985 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 85.94, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "3455847", "Number of Sequences": "178", "Longest Sequences (bp)": "115349", "N50 (bp)": "26350", "Gap Ratio (%)": "0.001331", "GCcontent (%)": "57.7", "Number of CDSs": "3171", "Average Protein Length": "305.7", "Coding Ratio (%)": "84.2", "Number of rRNAs": "0", "Number of tRNAs": "39", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Propionivibrio dicarboxylicus", "strain": "strain=DSM 5885", "accession": "GCA_900099695.1", "taxid": 83767, "species_taxid": 83767, "relation_to_type": "type", "validated": true, "ani": 78.5252, "matched_fragments": 348, "total_fragments": 1063, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Propionivibrio limicola", "strain": "strain=GolChi1", "accession": "GCA_009469695.1", "taxid": 167645, "species_taxid": 167645, "relation_to_type": "type", "validated": true, "ani": 78.4826, "matched_fragments": 266, "total_fragments": 1063, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodocyclus tenuis", "strain": "strain=2761", "accession": 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