{ "type": "genome", "identifier": "GCA_020052975.1", "organism": "Desulfobacterales bacterium", "title": "Desulfobacterales bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "Northwestern University", "publication": [ {} ], "properties": { "assembly_accession": "GCA_020052975.1", "bioproject": "PRJNA563685", "biosample": "SAMN18076965", "wgs_master": "JAGVOC000000000.1", "refseq_category": "na", "taxid": "2044940", "species_taxid": "2044940", "organism_name": "Desulfobacterales bacterium", "infraspecific_name": "", "isolate": "DeMMO3_16", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/09/20", "asm_name": "ASM2005297v1", "submitter": "Northwestern University", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/020/052/975/GCA_020052975.1_ASM2005297v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-09-20", "dateModified": "2021-09-20", "datePublished": "2021-09-20", "_annotation": { "sample_count": 1, "sample_organism": [ "Desulfobacterales bacterium" ], "sample_taxid": [ "2044940" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "USA: Sanford Underground Research Facility, Lead SD, Deep Mine Microbial Observatory (DeMMO)" ], "sample_host_location_id": [], "data_size": "1.310 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 4.17, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "4568961", "Number of Sequences": "491", "Longest Sequences (bp)": "58223", "N50 (bp)": "13148", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "43.7", "Number of CDSs": "4143", "Average Protein Length": "285.7", "Coding Ratio (%)": "77.7", "Number of rRNAs": "1", "Number of tRNAs": "52", "Number of CRISPRs": "2" }, "has_analysis": true, "_dfastqc": { "tc_result": [], "cc_result": { "completeness": 100.0, "contamination": 4.17, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCA_003599365.1", "gtdb_species": "s__UBA8473 sp003599365", "ani": 91.6807, "matched_fragments": 66, "total_fragments": 1273, "gtdb_taxonomy": "d__Bacteria;p__Desulfobacterota;c__UBA8473;o__UBA8473;f__UBA8473;g__UBA8473", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_018823005.1", "gtdb_species": 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