{
    "type": "genome",
    "identifier": "GCA_020054245.1",
    "organism": "Pirellulales bacterium",
    "title": "Pirellulales bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Northwestern University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_020054245.1",
        "bioproject": "PRJNA563685",
        "biosample": "SAMN18076900",
        "wgs_master": "JAGVLP000000000.1",
        "refseq_category": "na",
        "taxid": "2715253",
        "species_taxid": "2715253",
        "organism_name": "Pirellulales bacterium",
        "infraspecific_name": "",
        "isolate": "SW_64",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/09/20",
        "asm_name": "ASM2005424v1",
        "submitter": "Northwestern University",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/020/054/245/GCA_020054245.1_ASM2005424v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-09-20",
    "dateModified": "2021-09-20",
    "datePublished": "2021-09-20",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Pirellulales bacterium"
        ],
        "sample_taxid": [
            "2715253"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA: Sanford Underground Research Facility, Lead SD, Deep Mine Microbial Observatory (DeMMO)"
        ],
        "sample_host_location_id": [],
        "data_size": "1.027 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 58.33,
        "contamination": 4.17,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3635911",
        "Number of Sequences": "358",
        "Longest Sequences (bp)": "49056",
        "N50 (bp)": "13940",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "62.5",
        "Number of CDSs": "2635",
        "Average Protein Length": "328.0",
        "Coding Ratio (%)": "71.3",
        "Number of rRNAs": "1",
        "Number of tRNAs": "32",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Posidoniimonas corsicana",
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                "accession": "GCA_007859765.1",
                "taxid": 1938618,
                "species_taxid": 1938618,
                "relation_to_type": "type",
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                "matched_fragments": 64,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Posidoniimonas polymericola",
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                "accession": "GCA_007859935.1",
                "taxid": 2528002,
                "species_taxid": 2528002,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 60,
                "total_fragments": 1039,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Lacipirellula parvula",
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                "accession": "GCA_009177095.1",
                "taxid": 2650471,
                "species_taxid": 2650471,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.6606,
                "matched_fragments": 65,
                "total_fragments": 1039,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Lacipirellula limnantheis",
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                "accession": "GCA_007746075.1",
                "taxid": 2528024,
                "species_taxid": 2528024,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.5822,
                "matched_fragments": 73,
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Pseudobythopirellula maris",
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                "accession": "GCA_007859945.1",
                "taxid": 2527991,
                "species_taxid": 2527991,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.5152,
                "matched_fragments": 59,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pirellulimonas nuda",
                "strain": "strain=Pla175",
                "accession": "GCA_007750855.1",
                "taxid": 2528009,
                "species_taxid": 2528009,
                "relation_to_type": "type",
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                "ani": 75.3392,
                "matched_fragments": 70,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Tautonia plasticadhaerens",
                "strain": "strain=ElP",
                "accession": "GCA_007752535.1",
                "taxid": 2527974,
                "species_taxid": 2527974,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.1586,
                "matched_fragments": 60,
                "total_fragments": 1039,
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                "status": "below_threshold"
            }
        ],
        "cc_result": {
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        "gtdb_result": [
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                "accession": "GCA_003153375.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Pirellulales;f__PALSA-1355;g__PALSA-1355",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003389325.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Pirellulales;f__PALSA-1355;g__LB-PLM-3",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
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            },
            {
                "accession": "GCA_016793185.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Pirellulales;f__JAEUIK01;g__JAEUIK01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCA_016191115.1",
                "gtdb_species": "s__JACPPG01 sp016191115",
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                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Pirellulales;f__JACPPG01;g__JACPPG01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCA_018242585.1",
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                "matched_fragments": 78,
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                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__Planctomycetia;o__Pirellulales;f__PNKZ01;g__JAFEBQ01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_016200205.1",
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                "matched_fragments": 68,
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                "mean_intra_species_ani": "N/A",
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            {
                "accession": "GCA_016931995.1",
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        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
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        "genome_size": null,
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        "coding_genes": null,
        "rRNA16S_genes": null,
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        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
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        "mesophilic_range_tmp": null,
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        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
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    "_genome_taxon": [
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        "Planctomycetota",
        "Planctomycetia",
        "Pirellulales",
        "JAEUIK01",
        "JAIESQ01",
        "s",
        "",
        ""
    ],
    "_meo": [
        {
            "id": "MEO_0000731",
            "label": "drain water"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}