{ "type": "genome", "identifier": "GCA_020059835.1", "organism": "Desulfobacterales bacterium", "title": "Desulfobacterales bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "Northwestern University", "publication": [ {} ], "properties": { "assembly_accession": "GCA_020059835.1", "bioproject": "PRJNA563685", "biosample": "SAMN18076631", "wgs_master": "JAGVBG000000000.1", "refseq_category": "na", "taxid": "2044940", "species_taxid": "2044940", "organism_name": "Desulfobacterales bacterium", "infraspecific_name": "", "isolate": "DeMMO6_12", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/09/20", "asm_name": "ASM2005983v1", "submitter": "Northwestern University", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/020/059/835/GCA_020059835.1_ASM2005983v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-09-20", "dateModified": "2021-09-20", "datePublished": "2021-09-20", "_annotation": { "sample_count": 1, "sample_organism": [ "Desulfobacterales bacterium" ], "sample_taxid": [ "2044940" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "USA: Sanford Underground Research Facility, Lead SD, Deep Mine Microbial Observatory (DeMMO)" ], "sample_host_location_id": [], "data_size": "1.908 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 79.17, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "6693675", "Number of Sequences": "450", "Longest Sequences (bp)": "90604", "N50 (bp)": "23400", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "54.7", "Number of CDSs": "5727", "Average Protein Length": "321.4", "Coding Ratio (%)": "82.5", "Number of rRNAs": "1", "Number of tRNAs": "36", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Desulfatitalea tepidiphila", "strain": "strain=S28bF", "accession": "GCA_001293685.1", "taxid": 1185843, "species_taxid": 1185843, "relation_to_type": "type", "validated": true, "ani": 76.1535, "matched_fragments": 54, "total_fragments": 2027, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Desulfococcus multivorans", "strain": "strain=DSM 2059", "accession": "GCA_000422185.1", "taxid": 897, "species_taxid": 897, "relation_to_type": "type", "validated": true, "ani": 76.0147, "matched_fragments": 57, "total_fragments": 2027, "ani_threshold": 95, "status": 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