{
    "type": "genome",
    "identifier": "GCA_020063245.1",
    "organism": "Gemmatimonadota bacterium",
    "title": "Gemmatimonadota bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Northwestern University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_020063245.1",
        "bioproject": "PRJNA563685",
        "biosample": "SAMN18076462",
        "wgs_master": "JAGUUT000000000.1",
        "refseq_category": "na",
        "taxid": "2026742",
        "species_taxid": "2026742",
        "organism_name": "Gemmatimonadota bacterium",
        "infraspecific_name": "",
        "isolate": "DeMMO5_8",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/09/20",
        "asm_name": "ASM2006324v1",
        "submitter": "Northwestern University",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/020/063/245/GCA_020063245.1_ASM2006324v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-09-20",
    "dateModified": "2021-09-20",
    "datePublished": "2021-09-20",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Gemmatimonadota bacterium"
        ],
        "sample_taxid": [
            "2026742"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA: Sanford Underground Research Facility, Lead SD, Deep Mine Microbial Observatory (DeMMO)"
        ],
        "sample_host_location_id": [],
        "data_size": "0.896 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 91.67,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
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        "Total Sequence Length (bp)": "3263352",
        "Number of Sequences": "479",
        "Longest Sequences (bp)": "36662",
        "N50 (bp)": "8103",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "65.6",
        "Number of CDSs": "2235",
        "Average Protein Length": "354.2",
        "Coding Ratio (%)": "72.8",
        "Number of rRNAs": "0",
        "Number of tRNAs": "43",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "species_taxid": 1141884,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Methylobacterium platani",
                "strain": "strain=JCM 14648",
                "accession": "GCA_001043885.1",
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                "species_taxid": 427683,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Methylobacterium platani",
                "strain": "strain=PMB02",
                "accession": "GCA_001653715.1",
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                "relation_to_type": "type",
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                "matched_fragments": 52,
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Methylobacterium crusticola",
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                "accession": "GCA_022179145.1",
                "taxid": 1697972,
                "species_taxid": 1697972,
                "relation_to_type": "type",
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                "ani": 74.7102,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Methylobacterium crusticola",
                "strain": "strain=MIMD6",
                "accession": "GCA_003574465.1",
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                "species_taxid": 1697972,
                "relation_to_type": "type",
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                "ani": 74.6822,
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 0.0,
            "strain_heterogeneity": 0.0
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                "gtdb_taxonomy": "d__Bacteria;p__JABDJQ01;c__JABDJQ01;o__JABDJQ01;f__JABDJQ01;g__VGIW01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016930695.1",
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                "gtdb_taxonomy": "d__Bacteria;p__JABDJQ01;c__JABDJQ01;o__JABDJQ01;f__JABDJQ01;g__JAFGGD01",
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                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_013002425.1",
                "gtdb_species": "s__JABDJQ01 sp013002425",
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                "gtdb_taxonomy": "d__Bacteria;p__JABDJQ01;c__JABDJQ01;o__JABDJQ01;f__JABDJQ01;g__JABDJQ01",
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                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_016931295.1",
                "gtdb_species": "s__JAFGEZ01 sp016931295",
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                "matched_fragments": 64,
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                "gtdb_taxonomy": "d__Bacteria;p__Krumholzibacteriota;c__Krumholzibacteria;o__Krumholzibacteriales;f__Krumholzibacteriaceae;g__JAFGEZ01",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_009692555.1",
                "gtdb_species": "s__SHYY01 sp009692555",
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                "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Palsa-1104;f__Palsa-1104;g__SHYY01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
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                "status": "-"
            },
            {
                "accession": "GCA_011357805.1",
                "gtdb_species": "s__DSQF01 sp011357805",
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                "gtdb_taxonomy": "d__Bacteria;p__Eisenbacteria;c__RBG-16-71-46;o__RBG-16-71-46;f__RBG-16-71-46;g__DSQF01",
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            },
            {
                "accession": "GCA_011525755.1",
                "gtdb_species": "s__PLA2 sp011525755",
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            },
            {
                "accession": "GCA_011526095.1",
                "gtdb_species": "s__WYBA01 sp011526095",
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                "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Haliangiales;f__Haliangiaceae;g__WYBA01",
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            },
            {
                "accession": "GCA_016714045.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Planctomycetota;c__UBA1135;o__UBA1135;f__GCA-002686595;g__JADJNY01",
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        ]
    },
    "_bac2feature": {
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        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
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        "genome_size": null,
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        "coding_genes": null,
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        "gram_stain": null,
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        "motility": null,
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        "facultative_respiration": null,
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        "mesophilic_range_tmp": null,
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        "bacillus_cell_shape": null,
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        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
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    "_genome_taxon": [
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    "_meo": [
        {
            "id": "MEO_0000731",
            "label": "drain water"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}