{
    "type": "genome",
    "identifier": "GCA_020093135.1",
    "organism": "Pantoea sp.",
    "title": "Pantoea sp.",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "Jet Propulsion Laboratory, California Institute of Technology",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_020093135.1",
        "bioproject": "PRJNA438545",
        "biosample": "SAMN15778329",
        "wgs_master": "JAITYF000000000.1",
        "refseq_category": "na",
        "taxid": "69393",
        "species_taxid": "69393",
        "organism_name": "Pantoea sp.",
        "infraspecific_name": "",
        "isolate": "MAG-2F-S5P-2",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/09/22",
        "asm_name": "ASM2009313v1",
        "submitter": "Jet Propulsion Laboratory, California Institute of Technology",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/020/093/135/GCA_020093135.1_ASM2009313v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-09-22",
    "dateModified": "2021-09-22",
    "datePublished": "2021-09-22",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Pantoea sp."
        ],
        "sample_taxid": [
            "69393"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA: International Space Station"
        ],
        "sample_host_location_id": [],
        "data_size": "1.416 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": 65.0,
            "max": 65.0
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "5013168",
        "Number of Sequences": "86",
        "Longest Sequences (bp)": "759603",
        "N50 (bp)": "153890",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "55.9",
        "Number of CDSs": "4781",
        "Average Protein Length": "303.0",
        "Coding Ratio (%)": "86.7",
        "Number of rRNAs": "1",
        "Number of tRNAs": "66",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Pantoea conspicua",
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                "species_taxid": 472705,
                "relation_to_type": "type",
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                "total_fragments": 1630,
                "ani_threshold": 95,
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            },
            {
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                "accession": "GCA_001598475.1",
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                "species_taxid": 549,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 86.3573,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pantoea agglomerans",
                "strain": "strain=FDAARGOS 1447",
                "accession": "GCA_019048385.1",
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                "species_taxid": 549,
                "relation_to_type": "suspected-type",
                "validated": true,
                "ani": 86.3339,
                "matched_fragments": 1245,
                "total_fragments": 1630,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pantoea eucalypti",
                "strain": "strain=LMG 24197",
                "accession": "GCA_006494355.1",
                "taxid": 470933,
                "species_taxid": 470933,
                "relation_to_type": "type",
                "validated": true,
                "ani": 85.5486,
                "matched_fragments": 1163,
                "total_fragments": 1630,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pantoea eucalypti",
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                "accession": "GCA_009646115.1",
                "taxid": 470933,
                "species_taxid": 470933,
                "relation_to_type": "type",
                "validated": true,
                "ani": 85.5109,
                "matched_fragments": 1191,
                "total_fragments": 1630,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pantoea deleyi",
                "strain": "strain=LMG 24200",
                "accession": "GCA_002095375.1",
                "taxid": 470932,
                "species_taxid": 470932,
                "relation_to_type": "type",
                "validated": true,
                "ani": 85.4246,
                "matched_fragments": 1059,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pantoea deleyi",
                "strain": "strain=LMG24200",
                "accession": "GCA_022647325.1",
                "taxid": 470932,
                "species_taxid": 470932,
                "relation_to_type": "type",
                "validated": true,
                "ani": 85.2988,
                "matched_fragments": 1162,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pantoea deleyi",
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                "accession": "GCA_006494415.1",
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                "relation_to_type": "type",
                "validated": true,
                "ani": 85.2733,
                "matched_fragments": 1162,
                "total_fragments": 1630,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pantoea stewartii subsp. indologenes",
                "strain": "strain=LMG 2632",
                "accession": "GCA_000757405.2",
                "taxid": 66270,
                "species_taxid": 66269,
                "relation_to_type": "type",
                "validated": true,
                "ani": 81.2096,
                "matched_fragments": 856,
                "total_fragments": 1630,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Erwinia phyllosphaerae",
                "strain": "strain=CMYE1",
                "accession": "GCA_019132875.1",
                "taxid": 2853256,
                "species_taxid": 2853256,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.366,
                "matched_fragments": 638,
                "total_fragments": 1630,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Enterobacter wuhouensis",
                "strain": "strain=WCHEW120002",
                "accession": "GCA_004331265.1",
                "taxid": 2529381,
                "species_taxid": 2529381,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.9202,
                "matched_fragments": 541,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Leclercia pneumoniae",
                "strain": "strain=49125",
                "accession": "GCA_018987305.1",
                "taxid": 2815358,
                "species_taxid": 2815358,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.3818,
                "matched_fragments": 472,
                "total_fragments": 1630,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
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                "accession": "GCA_002095305.1",
                "gtdb_species": "s__Pantoea brenneri",
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                "matched_fragments": 1359,
                "total_fragments": 1630,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Pantoea",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.27",
                "min_intra_species_ani": "99.10",
                "mean_intra_species_af": "0.90",
                "min_intra_species_af": "0.85",
                "num_clustered_genomes": 24,
                "status": "conclusive"
            },
            {
                "accession": "GCA_009830035.1",
                "gtdb_species": "s__Pantoea sp009830035",
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                "matched_fragments": 1146,
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Pantoea",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002434205.1",
                "gtdb_species": "s__Pantoea sp002434205",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Pantoea",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCF_002095315.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Pantoea",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCF_001598475.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Pantoea",
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                "num_clustered_genomes": 124,
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            },
            {
                "accession": "GCF_004792415.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Pantoea",
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            {
                "accession": "GCF_900115075.1",
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            },
            {
                "accession": "GCF_006494375.1",
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            {
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                "num_clustered_genomes": 34,
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        ]
    },
    "_bac2feature": {
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    "_gtdb_taxon": [
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    "_genome_taxon": [
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        "Gammaproteobacteria",
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        "Enterobacteriaceae",
        "Pantoea",
        "Pantoea",
        "brenneri"
    ],
    "_meo": [
        {
            "id": "MEO_0001457",
            "label": "inside"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}