{
    "type": "genome",
    "identifier": "GCA_020200075.1",
    "organism": "Acidobacteriota bacterium",
    "title": "Acidobacteriota bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Instituto de Nutricion y Tecnologia de los Alimentos - Universidad de Chile",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_020200075.1",
        "bioproject": "PRJNA291433",
        "biosample": "SAMN18623623",
        "wgs_master": "JAIVJK000000000.1",
        "refseq_category": "na",
        "taxid": "1978231",
        "species_taxid": "1978231",
        "organism_name": "Acidobacteriota bacterium",
        "infraspecific_name": "",
        "isolate": "MAG49",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/09/30",
        "asm_name": "ASM2020007v1",
        "submitter": "Instituto de Nutricion y Tecnologia de los Alimentos - Universidad de Chile",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/020/200/075/GCA_020200075.1_ASM2020007v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-09-30",
    "dateModified": "2021-09-30",
    "datePublished": "2021-09-30",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Acidobacteriota bacterium"
        ],
        "sample_taxid": [
            "1978231"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Chile: Atacama Desert, between Atacama Salar and Lejia lagoon"
        ],
        "sample_host_location_id": [],
        "data_size": "1.342 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 44.14,
        "contamination": 8.33,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "4906646",
        "Number of Sequences": "681",
        "Longest Sequences (bp)": "217521",
        "N50 (bp)": "9235",
        "Gap Ratio (%)": "0.111624",
        "GCcontent (%)": "68.1",
        "Number of CDSs": "3629",
        "Average Protein Length": "314.0",
        "Coding Ratio (%)": "69.7",
        "Number of rRNAs": "0",
        "Number of tRNAs": "65",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Methylobacterium gnaphalii",
                "strain": "strain=DSM 24027",
                "accession": "GCA_022179205.1",
                "taxid": 1010610,
                "species_taxid": 1010610,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.9379,
                "matched_fragments": 85,
                "total_fragments": 1299,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Methylobacterium brachythecii",
                "strain": "strain=DSM 24105",
                "accession": "GCA_014196345.1",
                "taxid": 1176177,
                "species_taxid": 1176177,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.9215,
                "matched_fragments": 92,
                "total_fragments": 1299,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Anaeromyxobacter dehalogenans",
                "strain": "strain=2CP-1",
                "accession": "GCA_000022145.1",
                "taxid": 161493,
                "species_taxid": 161493,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.9112,
                "matched_fragments": 274,
                "total_fragments": 1299,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bradyrhizobium frederickii",
                "strain": "strain=CNPSo 3426",
                "accession": "GCA_004570865.1",
                "taxid": 2560054,
                "species_taxid": 2560054,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.873,
                "matched_fragments": 103,
                "total_fragments": 1299,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Methylobacterium gnaphalii",
                "strain": "strain=NBRC 107716",
                "accession": "GCA_007992215.1",
                "taxid": 1010610,
                "species_taxid": 1010610,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.868,
                "matched_fragments": 85,
                "total_fragments": 1299,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Saccharopolyspora karakumensis",
                "strain": "strain=5K548",
                "accession": "GCA_004349225.1",
                "taxid": 2530386,
                "species_taxid": 2530386,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.7527,
                "matched_fragments": 129,
                "total_fragments": 1299,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Tepidimonas taiwanensis",
                "strain": "strain=I1-1",
                "accession": "GCA_007556675.1",
                "taxid": 307486,
                "species_taxid": 307486,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.7344,
                "matched_fragments": 71,
                "total_fragments": 1299,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Tepidimonas taiwanensis",
                "strain": "strain=LMG 22826",
                "accession": "GCA_020162115.1",
                "taxid": 307486,
                "species_taxid": 307486,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.7234,
                "matched_fragments": 73,
                "total_fragments": 1299,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Saccharopolyspora terrae",
                "strain": "strain=16K309",
                "accession": "GCA_004348435.1",
                "taxid": 2530384,
                "species_taxid": 2530384,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.6983,
                "matched_fragments": 106,
                "total_fragments": 1299,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Saccharopolyspora aridisoli",
                "strain": "strain=16K404",
                "accession": "GCA_004348445.1",
                "taxid": 2530385,
                "species_taxid": 2530385,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.6513,
                "matched_fragments": 106,
                "total_fragments": 1299,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 44.14,
            "contamination": 8.33,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_019242475.1",
                "gtdb_species": "s__QHXN01 sp019242475",
                "ani": 80.2953,
                "matched_fragments": 634,
                "total_fragments": 1299,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Blastocatellia;o__Pyrinomonadales;f__Pyrinomonadaceae;g__QHXN01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_019239425.1",
                "gtdb_species": "s__QHXN01 sp019239425",
                "ani": 80.0741,
                "matched_fragments": 711,
                "total_fragments": 1299,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Blastocatellia;o__Pyrinomonadales;f__Pyrinomonadaceae;g__QHXN01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003222975.1",
                "gtdb_species": "s__QHXN01 sp003222975",
                "ani": 79.6411,
                "matched_fragments": 557,
                "total_fragments": 1299,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Blastocatellia;o__Pyrinomonadales;f__Pyrinomonadaceae;g__QHXN01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003223935.1",
                "gtdb_species": "s__QHXQ01 sp003223935",
                "ani": 77.3586,
                "matched_fragments": 374,
                "total_fragments": 1299,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Blastocatellia;o__Pyrinomonadales;f__Pyrinomonadaceae;g__QHXQ01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_013813825.1",
                "gtdb_species": "s__JACCRA01 sp013813825",
                "ani": 77.2398,
                "matched_fragments": 259,
                "total_fragments": 1299,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Blastocatellia;o__Pyrinomonadales;f__Pyrinomonadaceae;g__JACCRA01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_019247865.1",
                "gtdb_species": "s__JACMLC01 sp019247865",
                "ani": 76.8465,
                "matched_fragments": 206,
                "total_fragments": 1299,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Blastocatellia;o__Pyrinomonadales;f__Pyrinomonadaceae;g__JACMLC01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_013696465.1",
                "gtdb_species": "s__JACCYN01 sp013696465",
                "ani": 76.4197,
                "matched_fragments": 146,
                "total_fragments": 1299,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Blastocatellia;o__Pyrinomonadales;f__Pyrinomonadaceae;g__JACCYN01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_014379795.1",
                "gtdb_species": "s__JACMLC01 sp014379795",
                "ani": 75.9762,
                "matched_fragments": 98,
                "total_fragments": 1299,
                "gtdb_taxonomy": "d__Bacteria;p__Acidobacteriota;c__Blastocatellia;o__Pyrinomonadales;f__Pyrinomonadaceae;g__JACMLC01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Acidobacteriota",
        "c__Blastocatellia",
        "o__Pyrinomonadales",
        "f__Pyrinomonadaceae",
        "g__",
        "s__"
    ],
    "_genome_taxon": [
        "Acidobacteriota",
        "bacterium",
        "d__Bacteria",
        "p__Acidobacteriota",
        "c__Blastocatellia",
        "o__Pyrinomonadales",
        "f__Pyrinomonadaceae",
        "g__",
        "s__",
        "Bacteria",
        "Acidobacteriota",
        "Blastocatellia",
        "Pyrinomonadales",
        "Pyrinomonadaceae",
        "g",
        "",
        "",
        "s",
        "",
        ""
    ],
    "_meo": [
        {
            "id": "MEO_0000007",
            "label": "soil"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}