{
    "type": "genome",
    "identifier": "GCA_020200375.1",
    "organism": "Thermomicrobia bacterium",
    "title": "Thermomicrobia bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Instituto de Nutricion y Tecnologia de los Alimentos - Universidad de Chile",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_020200375.1",
        "bioproject": "PRJNA291433",
        "biosample": "SAMN18623605",
        "wgs_master": "JAIVIU000000000.1",
        "refseq_category": "na",
        "taxid": "2060770",
        "species_taxid": "2060770",
        "organism_name": "Thermomicrobia bacterium",
        "infraspecific_name": "",
        "isolate": "MAG97",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/09/30",
        "asm_name": "ASM2020037v1",
        "submitter": "Instituto de Nutricion y Tecnologia de los Alimentos - Universidad de Chile",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/020/200/375/GCA_020200375.1_ASM2020037v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-09-30",
    "dateModified": "2021-09-30",
    "datePublished": "2021-09-30",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Thermomicrobia bacterium"
        ],
        "sample_taxid": [
            "2060770"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Chile: Atacama Desert, between Atacama Salar and Lejia lagoon"
        ],
        "sample_host_location_id": [],
        "data_size": "1.272 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 90.91,
        "contamination": 26.89,
        "strain_heterogeneity": 81.82,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "4523181",
        "Number of Sequences": "913",
        "Longest Sequences (bp)": "22148",
        "N50 (bp)": "5708",
        "Gap Ratio (%)": "0.065772",
        "GCcontent (%)": "63.9",
        "Number of CDSs": "3861",
        "Average Protein Length": "267.5",
        "Coding Ratio (%)": "68.5",
        "Number of rRNAs": "0",
        "Number of tRNAs": "38",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Streptomyces fumanus",
                "strain": "strain=JCM 4477",
                "accession": "GCA_014655295.1",
                "taxid": 67302,
                "species_taxid": 67302,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.7756,
                "matched_fragments": 55,
                "total_fragments": 1018,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Gemmatirosa kalamazoonensis",
                "strain": "strain=KBS708",
                "accession": "GCA_000522985.1",
                "taxid": 861299,
                "species_taxid": 861299,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.7572,
                "matched_fragments": 96,
                "total_fragments": 1018,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Patulibacter minatonensis",
                "strain": "strain=DSM 18081",
                "accession": "GCA_000519325.1",
                "taxid": 298163,
                "species_taxid": 298163,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.7494,
                "matched_fragments": 51,
                "total_fragments": 1018,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Micromonospora humida",
                "strain": "strain=MMS20-R1-14",
                "accession": "GCA_016901255.1",
                "taxid": 2809018,
                "species_taxid": 2809018,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.6479,
                "matched_fragments": 54,
                "total_fragments": 1018,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Micromonospora mirobrigensis",
                "strain": "strain=DSM 44830",
                "accession": "GCA_900091555.1",
                "taxid": 262898,
                "species_taxid": 262898,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.6305,
                "matched_fragments": 50,
                "total_fragments": 1018,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 90.91,
            "contamination": 26.89,
            "strain_heterogeneity": 81.82
        },
        "gtdb_result": [
            {
                "accession": "GCA_902806415.1",
                "gtdb_species": "s__CADCWN01 sp902806415",
                "ani": 75.6441,
                "matched_fragments": 103,
                "total_fragments": 1018,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Chloroflexia;o__Thermomicrobiales;f__CADCWN01;g__CADCWN01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902806325.1",
                "gtdb_species": "s__CADCWE01 sp902806325",
                "ani": 75.5145,
                "matched_fragments": 61,
                "total_fragments": 1018,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Chloroflexia;o__Thermomicrobiales;f__UBA6265;g__CADCWE01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902806405.1",
                "gtdb_species": "s__CADCWL01 sp902806405",
                "ani": 75.1252,
                "matched_fragments": 62,
                "total_fragments": 1018,
                "gtdb_taxonomy": "d__Bacteria;p__Chloroflexota;c__Chloroflexia;o__Thermomicrobiales;f__UBA6265;g__CADCWL01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Chloroflexota",
        "c__Chloroflexia",
        "o__Thermomicrobiales",
        "f__JALYUS01",
        "g__JALYUS01",
        "s__"
    ],
    "_genome_taxon": [
        "Thermomicrobia",
        "bacterium",
        "d__Bacteria",
        "p__Chloroflexota",
        "c__Chloroflexia",
        "o__Thermomicrobiales",
        "f__JALYUS01",
        "g__JALYUS01",
        "s__",
        "Bacteria",
        "Chloroflexota",
        "Chloroflexia",
        "Thermomicrobiales",
        "JALYUS01",
        "JALYUS01",
        "s",
        "",
        ""
    ],
    "_meo": [
        {
            "id": "MEO_0000007",
            "label": "soil"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}