{
    "type": "genome",
    "identifier": "GCA_020201435.1",
    "organism": "Myxococcales bacterium",
    "title": "Myxococcales bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Instituto de Nutricion y Tecnologia de los Alimentos - Universidad de Chile",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_020201435.1",
        "bioproject": "PRJNA291433",
        "biosample": "SAMN18623543",
        "wgs_master": "JAIVGS000000000.1",
        "refseq_category": "na",
        "taxid": "2026763",
        "species_taxid": "2026763",
        "organism_name": "Myxococcales bacterium",
        "infraspecific_name": "",
        "isolate": "MAG102",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/09/30",
        "asm_name": "ASM2020143v1",
        "submitter": "Instituto de Nutricion y Tecnologia de los Alimentos - Universidad de Chile",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/020/201/435/GCA_020201435.1_ASM2020143v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-09-30",
    "dateModified": "2021-09-30",
    "datePublished": "2021-09-30",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Myxococcales bacterium"
        ],
        "sample_taxid": [
            "2026763"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Chile: Atacama Desert, between Atacama Salar and Lejia lagoon"
        ],
        "sample_host_location_id": [],
        "data_size": "1.293 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 91.67,
        "contamination": 12.96,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "4760704",
        "Number of Sequences": "363",
        "Longest Sequences (bp)": "84643",
        "N50 (bp)": "17746",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "68.5",
        "Number of CDSs": "4151",
        "Average Protein Length": "324.1",
        "Coding Ratio (%)": "84.8",
        "Number of rRNAs": "1",
        "Number of tRNAs": "46",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Vulgatibacter incomptus",
                "strain": "strain=DSM 27710",
                "accession": "GCA_001263175.1",
                "taxid": 1391653,
                "species_taxid": 1391653,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.1876,
                "matched_fragments": 156,
                "total_fragments": 1409,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Anaeromyxobacter dehalogenans",
                "strain": "strain=2CP-1",
                "accession": "GCA_000022145.1",
                "taxid": 161493,
                "species_taxid": 161493,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.1339,
                "matched_fragments": 321,
                "total_fragments": 1409,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Corallococcus silvisoli",
                "strain": "strain=c25j21",
                "accession": "GCA_009909145.1",
                "taxid": 2697031,
                "species_taxid": 2697031,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.8977,
                "matched_fragments": 186,
                "total_fragments": 1409,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Corallococcus carmarthensis",
                "strain": "strain=CA043D",
                "accession": "GCA_003611695.1",
                "taxid": 2316728,
                "species_taxid": 2316728,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.8954,
                "matched_fragments": 183,
                "total_fragments": 1409,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Corallococcus llansteffanensis",
                "strain": "strain=CA051B",
                "accession": "GCA_003612055.1",
                "taxid": 2316731,
                "species_taxid": 2316731,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.8131,
                "matched_fragments": 190,
                "total_fragments": 1409,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Corallococcus praedator",
                "strain": "strain=CA031B",
                "accession": "GCA_003612125.1",
                "taxid": 2316724,
                "species_taxid": 2316724,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.7509,
                "matched_fragments": 185,
                "total_fragments": 1409,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Corallococcus soli",
                "strain": "strain=ZKHCc1 1396",
                "accession": "GCA_014930455.1",
                "taxid": 2710757,
                "species_taxid": 2710757,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.7126,
                "matched_fragments": 188,
                "total_fragments": 1409,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sphingomonas jatrophae",
                "strain": "strain=S5-249",
                "accession": "GCA_900113315.1",
                "taxid": 1166337,
                "species_taxid": 1166337,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.2652,
                "matched_fragments": 84,
                "total_fragments": 1409,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Polyangium aurulentum",
                "strain": "strain=SDU3-1",
                "accession": "GCA_005144635.2",
                "taxid": 2567896,
                "species_taxid": 2567896,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.148,
                "matched_fragments": 313,
                "total_fragments": 1409,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sphingomonas faeni",
                "strain": "strain=MA-olki",
                "accession": "GCA_003053745.1",
                "taxid": 185950,
                "species_taxid": 185950,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.1158,
                "matched_fragments": 72,
                "total_fragments": 1409,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Thauera phenylacetica",
                "strain": "strain=B4P",
                "accession": "GCA_000310225.1",
                "taxid": 164400,
                "species_taxid": 164400,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.0991,
                "matched_fragments": 135,
                "total_fragments": 1409,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Thauera linaloolentis",
                "strain": "strain=47Lol = DSM 12138",
                "accession": "GCA_000310205.1",
                "taxid": 76112,
                "species_taxid": 76112,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.085,
                "matched_fragments": 91,
                "total_fragments": 1409,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Thauera linaloolentis",
                "strain": "strain=DSM 12138",
                "accession": "GCA_000621305.1",
                "taxid": 76112,
                "species_taxid": 76112,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.0713,
                "matched_fragments": 98,
                "total_fragments": 1409,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sphingomonas aerolata",
                "strain": "strain=NW12",
                "accession": "GCA_003046295.1",
                "taxid": 185951,
                "species_taxid": 185951,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.9615,
                "matched_fragments": 103,
                "total_fragments": 1409,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Botrimarina colliarenosi",
                "strain": "strain=Pla108",
                "accession": "GCA_007859955.1",
                "taxid": 2528001,
                "species_taxid": 2528001,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.9541,
                "matched_fragments": 73,
                "total_fragments": 1409,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Micromonospora endolithica",
                "strain": "strain=JCM 12677",
                "accession": "GCA_003626595.1",
                "taxid": 230091,
                "species_taxid": 230091,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.862,
                "matched_fragments": 153,
                "total_fragments": 1409,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sphingomonas radiodurans",
                "strain": "strain=S9-5",
                "accession": "GCA_020866845.1",
                "taxid": 2890321,
                "species_taxid": 2890321,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.8571,
                "matched_fragments": 68,
                "total_fragments": 1409,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Micromonospora endolithica",
                "strain": "strain=DSM 44398",
                "accession": "GCA_007994185.1",
                "taxid": 230091,
                "species_taxid": 230091,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.8539,
                "matched_fragments": 157,
                "total_fragments": 1409,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Kineococcus vitellinus",
                "strain": "strain=T13",
                "accession": "GCA_009906315.1",
                "taxid": 2696565,
                "species_taxid": 2696565,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.8296,
                "matched_fragments": 134,
                "total_fragments": 1409,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Methyloversatilis discipulorum",
                "strain": "strain=FAM1",
                "accession": "GCA_000527135.1",
                "taxid": 1119528,
                "species_taxid": 1119528,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.812,
                "matched_fragments": 109,
                "total_fragments": 1409,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Polymorphobacter glacialis",
                "strain": "strain=CGMCC 1.15519",
                "accession": "GCA_014643455.1",
                "taxid": 1614636,
                "species_taxid": 1614636,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.7971,
                "matched_fragments": 71,
                "total_fragments": 1409,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Micromonospora tarapacensis",
                "strain": "strain=Llam7",
                "accession": "GCA_019697375.1",
                "taxid": 2835305,
                "species_taxid": 2835305,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.7899,
                "matched_fragments": 142,
                "total_fragments": 1409,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Paraburkholderia sprentiae",
                "strain": "strain=WSM5005",
                "accession": "GCA_000473465.1",
                "taxid": 948107,
                "species_taxid": 948107,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.7314,
                "matched_fragments": 121,
                "total_fragments": 1409,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Actinoplanes toevensis",
                "strain": "strain=NBRC 105298",
                "accession": "GCA_018332695.1",
                "taxid": 571911,
                "species_taxid": 571911,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.7174,
                "matched_fragments": 231,
                "total_fragments": 1409,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Bifidobacterium parmae",
                "strain": "strain=Uis4E",
                "accession": "GCA_002860365.1",
                "taxid": 361854,
                "species_taxid": 361854,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.626,
                "matched_fragments": 55,
                "total_fragments": 1409,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 91.67,
            "contamination": 12.96,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_005879095.1",
                "gtdb_species": "s__40CM-4-68-19 sp005879095",
                "ani": 84.5028,
                "matched_fragments": 632,
                "total_fragments": 1409,
                "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Myxococcia;o__Myxococcales;f__40CM-4-68-19;g__40CM-4-68-19",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_005879315.1",
                "gtdb_species": "s__40CM-4-68-19 sp005879315",
                "ani": 79.7634,
                "matched_fragments": 692,
                "total_fragments": 1409,
                "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Myxococcia;o__Myxococcales;f__40CM-4-68-19;g__40CM-4-68-19",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_005879535.1",
                "gtdb_species": "s__40CM-4-68-19 sp005879535",
                "ani": 79.3733,
                "matched_fragments": 704,
                "total_fragments": 1409,
                "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Myxococcia;o__Myxococcales;f__40CM-4-68-19;g__40CM-4-68-19",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.43",
                "min_intra_species_ani": "99.24",
                "mean_intra_species_af": "0.97",
                "min_intra_species_af": "0.96",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_001918155.1",
                "gtdb_species": "s__40CM-4-68-19 sp001918155",
                "ani": 79.2296,
                "matched_fragments": 513,
                "total_fragments": 1409,
                "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Myxococcia;o__Myxococcales;f__40CM-4-68-19;g__40CM-4-68-19",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.92",
                "min_intra_species_ani": "96.26",
                "mean_intra_species_af": "0.81",
                "min_intra_species_af": "0.76",
                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCA_005879505.1",
                "gtdb_species": "s__40CM-4-68-19 sp005879505",
                "ani": 78.8579,
                "matched_fragments": 493,
                "total_fragments": 1409,
                "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Myxococcia;o__Myxococcales;f__40CM-4-68-19;g__40CM-4-68-19",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.97",
                "min_intra_species_ani": "95.97",
                "mean_intra_species_af": "0.72",
                "min_intra_species_af": "0.72",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_005888115.1",
                "gtdb_species": "s__40CM-4-68-19 sp005888115",
                "ani": 78.4063,
                "matched_fragments": 502,
                "total_fragments": 1409,
                "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Myxococcia;o__Myxococcales;f__40CM-4-68-19;g__40CM-4-68-19",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_005879805.1",
                "gtdb_species": "s__40CM-4-68-19 sp005879805",
                "ani": 77.9829,
                "matched_fragments": 469,
                "total_fragments": 1409,
                "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Myxococcia;o__Myxococcales;f__40CM-4-68-19;g__40CM-4-68-19",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.16",
                "min_intra_species_ani": "99.16",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.91",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_903911145.1",
                "gtdb_species": "s__CAIWCD01 sp903911145",
                "ani": 77.4068,
                "matched_fragments": 359,
                "total_fragments": 1409,
                "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Myxococcia;o__Myxococcales;f__40CM-4-68-19;g__CAIWCD01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "100.00",
                "min_intra_species_ani": "99.99",
                "mean_intra_species_af": "1.00",
                "min_intra_species_af": "0.99",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_016714225.1",
                "gtdb_species": "s__JAEUJP01 sp016714225",
                "ani": 75.6545,
                "matched_fragments": 320,
                "total_fragments": 1409,
                "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Myxococcia;o__Myxococcales;f__Myxococcaceae;g__JAEUJP01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.126,
        "cell_length": 0.61,
        "doubling_h": 0.801,
        "growth_tmp": 28.761,
        "optimum_tmp": 29.364,
        "optimum_ph": 7.8,
        "genome_size": 9965390.721,
        "gc_content": 69.329,
        "coding_genes": 8198.189,
        "rRNA16S_genes": 3.222,
        "tRNA_genes": 63.782,
        "gram_stain": 0.0,
        "sporulation": 0.928,
        "motility": 0.941,
        "range_salinity": 0.75,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 0.0,
        "aerobic_respiration": 1.0,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Myxococcota",
        "c__Myxococcia",
        "o__Myxococcales",
        "f__40CM-4-68-19",
        "g__40CM-4-68-19",
        "s__40CM-4-68-19 sp020201435"
    ],
    "_genome_taxon": [
        "Myxococcales",
        "bacterium",
        "d__Bacteria",
        "p__Myxococcota",
        "c__Myxococcia",
        "o__Myxococcales",
        "f__40CM-4-68-19",
        "g__40CM-4-68-19",
        "s__40CM-4-68-19 sp020201435",
        "Bacteria",
        "Myxococcota",
        "Myxococcia",
        "Myxococcales",
        "40CM-4-68-19",
        "40CM-4-68-19",
        "40CM-4-68-19",
        "sp020201435"
    ],
    "_meo": [
        {
            "id": "MEO_0000007",
            "label": "soil"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}