{
    "type": "genome",
    "identifier": "GCA_020201525.1",
    "organism": "Actinomycetota bacterium",
    "title": "Actinomycetota bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Instituto de Nutricion y Tecnologia de los Alimentos - Universidad de Chile",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_020201525.1",
        "bioproject": "PRJNA291433",
        "biosample": "SAMN18623538",
        "wgs_master": "JAIVGO000000000.1",
        "refseq_category": "na",
        "taxid": "2900548",
        "species_taxid": "2900548",
        "organism_name": "Actinomycetota bacterium",
        "infraspecific_name": "",
        "isolate": "MAG113",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/09/30",
        "asm_name": "ASM2020152v1",
        "submitter": "Instituto de Nutricion y Tecnologia de los Alimentos - Universidad de Chile",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/020/201/525/GCA_020201525.1_ASM2020152v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-09-30",
    "dateModified": "2021-09-30",
    "datePublished": "2021-09-30",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Actinomycetia bacterium"
        ],
        "sample_taxid": [
            "1883427"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Chile: Atacama Desert, between Atacama Salar and Lejia lagoon"
        ],
        "sample_host_location_id": [],
        "data_size": "1.036 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 99.62,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3705180",
        "Number of Sequences": "209",
        "Longest Sequences (bp)": "81820",
        "N50 (bp)": "24899",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "64.2",
        "Number of CDSs": "3446",
        "Average Protein Length": "307.2",
        "Coding Ratio (%)": "85.7",
        "Number of rRNAs": "0",
        "Number of tRNAs": "61",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Rhodococcus rhodnii",
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                "accession": "GCA_001894925.1",
                "taxid": 38312,
                "species_taxid": 38312,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.243,
                "matched_fragments": 60,
                "total_fragments": 1128,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Longispora fulva",
                "strain": "strain=DSM 45356",
                "accession": "GCA_015751905.1",
                "taxid": 619741,
                "species_taxid": 619741,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.2139,
                "matched_fragments": 59,
                "total_fragments": 1128,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Lentzea xinjiangensis",
                "strain": "strain=CGMCC 4.3525",
                "accession": "GCA_900110955.1",
                "taxid": 402600,
                "species_taxid": 402600,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.178,
                "matched_fragments": 74,
                "total_fragments": 1128,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Asanoa iriomotensis",
                "strain": "strain=NBRC 100142",
                "accession": "GCA_016862515.1",
                "taxid": 234613,
                "species_taxid": 234613,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.1647,
                "matched_fragments": 79,
                "total_fragments": 1128,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Glycomyces paridis",
                "strain": "strain=CPCC 204357",
                "accession": "GCA_004912155.1",
                "taxid": 2126555,
                "species_taxid": 2126555,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.1377,
                "matched_fragments": 58,
                "total_fragments": 1128,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Longispora fulva",
                "strain": "strain=NBRC 105670",
                "accession": "GCA_016862835.1",
                "taxid": 619741,
                "species_taxid": 619741,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.1295,
                "matched_fragments": 60,
                "total_fragments": 1128,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Allostreptomyces psammosilenae",
                "strain": "strain=DSM 42178",
                "accession": "GCA_013407765.1",
                "taxid": 1892865,
                "species_taxid": 1892865,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.1028,
                "matched_fragments": 67,
                "total_fragments": 1128,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Microlunatus parietis",
                "strain": "strain=DSM 22083",
                "accession": "GCA_013407955.1",
                "taxid": 682979,
                "species_taxid": 682979,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.9124,
                "matched_fragments": 53,
                "total_fragments": 1128,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 99.62,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_005884515.1",
                "gtdb_species": "s__AC-67 sp005884515",
                "ani": 76.7331,
                "matched_fragments": 111,
                "total_fragments": 1128,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__UBA4738;o__AC-67;f__AC-67;g__AC-67",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_005883175.1",
                "gtdb_species": "s__AC-67 sp005883175",
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                "matched_fragments": 70,
                "total_fragments": 1128,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__UBA4738;o__AC-67;f__AC-67;g__AC-67",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "95.81",
                "min_intra_species_ani": "95.81",
                "mean_intra_species_af": "0.74",
                "min_intra_species_af": "0.74",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_016208485.1",
                "gtdb_species": "s__JACQXY01 sp016208485",
                "ani": 76.076,
                "matched_fragments": 79,
                "total_fragments": 1128,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__UBA4738;o__AC-67;f__AC-67;g__JACQXY01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_001618005.1",
                "gtdb_species": "s__Clavibacter tessellarius_A",
                "ani": 75.2878,
                "matched_fragments": 55,
                "total_fragments": 1128,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Clavibacter",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_015751905.1",
                "gtdb_species": "s__Longispora fulva",
                "ani": 75.2031,
                "matched_fragments": 60,
                "total_fragments": 1128,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Longispora",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "100.00",
                "min_intra_species_ani": "100.00",
                "mean_intra_species_af": "1.00",
                "min_intra_species_af": "1.00",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCF_016862635.1",
                "gtdb_species": "s__Catellatospora coxensis",
                "ani": 74.9531,
                "matched_fragments": 64,
                "total_fragments": 1128,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Micromonosporaceae;g__Catellatospora",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Actinomycetota",
        "c__UBA4738",
        "o__AC-67",
        "f__AC-67",
        "g__JAIVGO01",
        "s__JAIVGO01 sp020201525"
    ],
    "_genome_taxon": [
        "Actinomycetota",
        "bacterium",
        "d__Bacteria",
        "p__Actinomycetota",
        "c__UBA4738",
        "o__AC-67",
        "f__AC-67",
        "g__JAIVGO01",
        "s__JAIVGO01 sp020201525",
        "Bacteria",
        "Actinomycetota",
        "UBA4738",
        "AC-67",
        "AC-67",
        "JAIVGO01",
        "JAIVGO01",
        "sp020201525"
    ],
    "_meo": [
        {
            "id": "MEO_0000007",
            "label": "soil"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}