{
    "type": "genome",
    "identifier": "GCA_020216885.1",
    "organism": "Zymomonas sp.",
    "title": "Zymomonas sp.",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "University of Delhi",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_020216885.1",
        "bioproject": "PRJNA673998",
        "biosample": "SAMN16863488",
        "wgs_master": "JAIWON000000000.1",
        "refseq_category": "na",
        "taxid": "2068624",
        "species_taxid": "2068624",
        "organism_name": "Zymomonas sp.",
        "infraspecific_name": "",
        "isolate": "W26",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/10/02",
        "asm_name": "ASM2021688v1",
        "submitter": "University of Delhi",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/020/216/885/GCA_020216885.1_ASM2021688v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-10-02",
    "dateModified": "2021-10-02",
    "datePublished": "2021-10-02",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Zymomonas sp."
        ],
        "sample_taxid": [
            "2068624"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "India: Khirganga hotspring, Himachal Pradesh, Northern Hiamayas"
        ],
        "sample_host_location_id": [],
        "data_size": "0.547 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 92.53,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1921851",
        "Number of Sequences": "184",
        "Longest Sequences (bp)": "19915",
        "N50 (bp)": "10000",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "45.9",
        "Number of CDSs": "1506",
        "Average Protein Length": "322.4",
        "Coding Ratio (%)": "75.8",
        "Number of rRNAs": "0",
        "Number of tRNAs": "42",
        "Number of CRISPRs": "3"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Zymomonas mobilis subsp. pomaceae",
                "strain": "strain=ATCC 29192",
                "accession": "GCA_000218875.1",
                "taxid": 120044,
                "species_taxid": 542,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.9472,
                "matched_fragments": 224,
                "total_fragments": 565,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Zymomonas mobilis subsp. pomaceae",
                "strain": "strain=NBRC 13757",
                "accession": "GCA_006539385.1",
                "taxid": 120044,
                "species_taxid": 542,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.9454,
                "matched_fragments": 224,
                "total_fragments": 565,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 92.53,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_000175255.2",
                "gtdb_species": "s__Zymomonas mobilis",
                "ani": 93.7027,
                "matched_fragments": 548,
                "total_fragments": 565,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Zymomonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.43",
                "min_intra_species_ani": "96.89",
                "mean_intra_species_af": "0.96",
                "min_intra_species_af": "0.93",
                "num_clustered_genomes": 26,
                "status": "-"
            },
            {
                "accession": "GCF_006715975.1",
                "gtdb_species": "s__Zymomonas mobilis_B",
                "ani": 83.1894,
                "matched_fragments": 470,
                "total_fragments": 565,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Zymomonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000218875.1",
                "gtdb_species": "s__Zymomonas pomaceae",
                "ani": 78.927,
                "matched_fragments": 225,
                "total_fragments": 565,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Zymomonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "100.00",
                "min_intra_species_ani": "100.00",
                "mean_intra_species_af": "0.99",
                "min_intra_species_af": "0.99",
                "num_clustered_genomes": 2,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": 0.246,
        "growth_tmp": 29.75,
        "optimum_tmp": 28.333,
        "optimum_ph": null,
        "genome_size": 2116276.571,
        "gc_content": 43.876,
        "coding_genes": 1809.545,
        "rRNA16S_genes": 2.727,
        "tRNA_genes": 50.357,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 1.0,
        "range_salinity": null,
        "facultative_respiration": 1.0,
        "anaerobic_respiration": 0.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Alphaproteobacteria",
        "o__Sphingomonadales",
        "f__Sphingomonadaceae",
        "g__Zymomonas",
        "s__Zymomonas sp020216885"
    ],
    "_genome_taxon": [
        "Zymomonas",
        "sp.",
        "d__Bacteria",
        "p__Pseudomonadota",
        "c__Alphaproteobacteria",
        "o__Sphingomonadales",
        "f__Sphingomonadaceae",
        "g__Zymomonas",
        "s__Zymomonas sp020216885",
        "Bacteria",
        "Pseudomonadota",
        "Alphaproteobacteria",
        "Sphingomonadales",
        "Sphingomonadaceae",
        "Zymomonas",
        "Zymomonas",
        "sp020216885"
    ],
    "_meo": [
        {
            "id": "MEO_0000029",
            "label": "hot spring"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}