{ "type": "genome", "identifier": "GCA_020245865.1", "organism": "Microcystis sp. M169S2", "title": "Microcystis sp. M169S2", "description": "derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "Universite de Montreal", "publication": [ {} ], "properties": { "assembly_accession": "GCA_020245865.1", "bioproject": "PRJNA662092", "biosample": "SAMN16074499", "wgs_master": "JADBUB000000000.1", "refseq_category": "na", "taxid": "2771157", "species_taxid": "2771157", "organism_name": "Microcystis sp. M169S2", "infraspecific_name": "", "isolate": "M169S2", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/10/04", "asm_name": "ASM2024586v1", "submitter": "Universite de Montreal", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/020/245/865/GCA_020245865.1_ASM2024586v1", "excluded_from_refseq": "derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-10-04", "dateModified": "2021-10-04", "datePublished": "2021-10-04", "_annotation": { "sample_count": 1, "sample_organism": [ "Microcystis sp. M169S2" ], "sample_taxid": [ "2771157" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Canada:Quebec,Champlain Lake" ], "sample_host_location_id": [], "data_size": "1.320 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 95.83, "contamination": 0.46, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "4655797", "Number of Sequences": "263", "Longest Sequences (bp)": "95301", "N50 (bp)": "28769", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "43.1", "Number of CDSs": "4037", "Average Protein Length": "301.2", "Coding Ratio (%)": "78.3", "Number of rRNAs": "5", "Number of tRNAs": "45", "Number of CRISPRs": "5" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Microcystis aeruginosa", "strain": "strain=NIES-843", "accession": "GCA_000010625.1", "taxid": 1126, "species_taxid": 1126, "relation_to_type": "suspected-type", "validated": true, "ani": 94.6013, "matched_fragments": 1193, "total_fragments": 1422, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rippkaea orientalis", "strain": "strain=PCC 8801", "accession": "GCA_000021805.1", "taxid": 2546366, "species_taxid": 2546366, "relation_to_type": "type", "validated": true, "ani": 76.0859, "matched_fragments": 125, "total_fragments": 1422, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Planktothrix tepida", "strain": "strain=PCC9214", "accession": "GCA_904830955.1", "taxid": 1678309, "species_taxid": 1678309, "relation_to_type": "type", "validated": true, "ani": 75.9988, "matched_fragments": 93, "total_fragments": 1422, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Crocosphaera watsonii", "strain": "strain=WH 8501", "accession": "GCA_000167195.1", "taxid": 263511, "species_taxid": 263511, "relation_to_type": "suspected-type", "validated": true, "ani": 75.992, "matched_fragments": 73, "total_fragments": 1422, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Crocosphaera subtropica", "strain": "strain=ATCC 51142", "accession": "GCA_000017845.1", "taxid": 2546360, "species_taxid": 2546360, "relation_to_type": "type", "validated": true, "ani": 75.7855, "matched_fragments": 84, "total_fragments": 1422, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gloeothece verrucosa", "strain": "strain=PCC 7822", "accession": "GCA_000147335.1", "taxid": 2546359, "species_taxid": 2546359, "relation_to_type": "type", "validated": true, "ani": 75.7147, "matched_fragments": 112, "total_fragments": 1422, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gloeothece citriformis", "strain": "strain=PCC 7424", "accession": "GCA_000021825.1", "taxid": 2546356, "species_taxid": 2546356, 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