{
    "type": "genome",
    "identifier": "GCA_020253985.1",
    "organism": "Cutibacterium sp.",
    "title": "Cutibacterium sp.",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "Universite de Montreal",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_020253985.1",
        "bioproject": "PRJNA662092",
        "biosample": "SAMN16074935",
        "wgs_master": "JADDKE000000000.1",
        "refseq_category": "na",
        "taxid": "1912221",
        "species_taxid": "1912221",
        "organism_name": "Cutibacterium sp.",
        "infraspecific_name": "",
        "isolate": "M18BS1SP1A17MG",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/10/04",
        "asm_name": "ASM2025398v1",
        "submitter": "Universite de Montreal",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/020/253/985/GCA_020253985.1_ASM2025398v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-10-04",
    "dateModified": "2021-10-04",
    "datePublished": "2021-10-04",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Cutibacterium sp."
        ],
        "sample_taxid": [
            "1912221"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Brazil:Belo Horizonte,Pampulha Lake"
        ],
        "sample_host_location_id": [],
        "data_size": "0.710 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.83,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2481910",
        "Number of Sequences": "135",
        "Longest Sequences (bp)": "96552",
        "N50 (bp)": "36269",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "60.2",
        "Number of CDSs": "2164",
        "Average Protein Length": "315.2",
        "Coding Ratio (%)": "82.4",
        "Number of rRNAs": "3",
        "Number of tRNAs": "47",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Cutibacterium acnes",
                "strain": "strain=DSM 1897",
                "accession": "GCA_004136195.1",
                "taxid": 1747,
                "species_taxid": 1747,
                "relation_to_type": "type",
                "validated": true,
                "ani": 99.7652,
                "matched_fragments": 744,
                "total_fragments": 757,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Cutibacterium acnes",
                "strain": "strain=ATCC 6919",
                "accession": "GCA_003030305.1",
                "taxid": 1747,
                "species_taxid": 1747,
                "relation_to_type": "type",
                "validated": true,
                "ani": 99.7648,
                "matched_fragments": 744,
                "total_fragments": 757,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Cutibacterium acnes",
                "strain": "strain=ATCC 6919",
                "accession": "GCA_008728435.1",
                "taxid": 1747,
                "species_taxid": 1747,
                "relation_to_type": "type",
                "validated": true,
                "ani": 99.7648,
                "matched_fragments": 742,
                "total_fragments": 757,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Cutibacterium acnes",
                "strain": "strain=DSM 1897",
                "accession": "GCA_000472405.1",
                "taxid": 1747,
                "species_taxid": 1747,
                "relation_to_type": "type",
                "validated": true,
                "ani": 99.7641,
                "matched_fragments": 743,
                "total_fragments": 757,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Cutibacterium acnes",
                "strain": "strain=ATCC 6919",
                "accession": "GCA_000730485.1",
                "taxid": 1747,
                "species_taxid": 1747,
                "relation_to_type": "type",
                "validated": true,
                "ani": 99.6724,
                "matched_fragments": 710,
                "total_fragments": 757,
                "ani_threshold": 95,
                "status": "conclusive"
            }
        ],
        "cc_result": {
            "completeness": 95.83,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_003030305.1",
                "gtdb_species": "s__Cutibacterium acnes",
                "ani": 99.7648,
                "matched_fragments": 744,
                "total_fragments": 757,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Propionibacteriaceae;g__Cutibacterium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.06",
                "min_intra_species_ani": "96.60",
                "mean_intra_species_af": "0.98",
                "min_intra_species_af": "0.92",
                "num_clustered_genomes": 326,
                "status": "conclusive"
            },
            {
                "accession": "GCF_001642025.1",
                "gtdb_species": "s__Cutibacterium namnetense",
                "ani": 88.149,
                "matched_fragments": 654,
                "total_fragments": 757,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Propionibacteriaceae;g__Cutibacterium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.52",
                "min_intra_species_ani": "99.43",
                "mean_intra_species_af": "0.97",
                "min_intra_species_af": "0.94",
                "num_clustered_genomes": 5,
                "status": "-"
            },
            {
                "accession": "GCF_008326345.1",
                "gtdb_species": "s__Cutibacterium modestum",
                "ani": 85.8031,
                "matched_fragments": 651,
                "total_fragments": 757,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Propionibacteriaceae;g__Cutibacterium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.93",
                "min_intra_species_ani": "99.74",
                "mean_intra_species_af": "1.00",
                "min_intra_species_af": "0.99",
                "num_clustered_genomes": 9,
                "status": "-"
            },
            {
                "accession": "GCF_009696315.1",
                "gtdb_species": "s__Cutibacterium porci",
                "ani": 82.64,
                "matched_fragments": 569,
                "total_fragments": 757,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Propionibacteriaceae;g__Cutibacterium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000227295.1",
                "gtdb_species": "s__Cutibacterium avidum",
                "ani": 81.8271,
                "matched_fragments": 533,
                "total_fragments": 757,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Propionibacteriaceae;g__Cutibacterium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.99",
                "min_intra_species_ani": "95.78",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.87",
                "num_clustered_genomes": 29,
                "status": "-"
            },
            {
                "accession": "GCF_001441165.1",
                "gtdb_species": "s__Acidipropionibacterium acidipropionici",
                "ani": 78.0139,
                "matched_fragments": 200,
                "total_fragments": 757,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Propionibacteriales;f__Propionibacteriaceae;g__Acidipropionibacterium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.00",
                "min_intra_species_ani": "98.39",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.89",
                "num_clustered_genomes": 8,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": 0.707,
        "growth_tmp": 36.75,
        "optimum_tmp": 37.0,
        "optimum_ph": null,
        "genome_size": 2472411.144,
        "gc_content": 61.987,
        "coding_genes": 2108.949,
        "rRNA16S_genes": 2.714,
        "tRNA_genes": 45.666,
        "gram_stain": 1.0,
        "sporulation": 0.0,
        "motility": 0.0,
        "range_salinity": 1.0,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 1.0,
        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": 1.0,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Actinomycetota",
        "c__Actinomycetes",
        "o__Propionibacteriales",
        "f__Propionibacteriaceae",
        "g__Cutibacterium",
        "s__Cutibacterium acnes"
    ],
    "_genome_taxon": [
        "Cutibacterium",
        "sp.",
        "d__Bacteria",
        "p__Actinomycetota",
        "c__Actinomycetes",
        "o__Propionibacteriales",
        "f__Propionibacteriaceae",
        "g__Cutibacterium",
        "s__Cutibacterium acnes",
        "Bacteria",
        "Actinomycetota",
        "Actinomycetes",
        "Propionibacteriales",
        "Propionibacteriaceae",
        "Cutibacterium",
        "Cutibacterium",
        "acnes"
    ],
    "_meo": [
        {
            "id": "MEO_0000038",
            "label": "freshwater"
        },
        {
            "id": "MEO_0001054",
            "label": "algal bloom"
        }
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}