{
    "type": "genome",
    "identifier": "GCA_020403625.1",
    "organism": "Chitinophagaceae bacterium",
    "title": "Chitinophagaceae bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Universite de Montreal",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_020403625.1",
        "bioproject": "PRJNA662092",
        "biosample": "SAMN16074585",
        "wgs_master": "JADBXJ000000000.1",
        "refseq_category": "na",
        "taxid": "1869212",
        "species_taxid": "1869212",
        "organism_name": "Chitinophagaceae bacterium",
        "infraspecific_name": "",
        "isolate": "M144S2SP1A08QC",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/10/09",
        "asm_name": "ASM2040362v1",
        "submitter": "Universite de Montreal",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/020/403/625/GCA_020403625.1_ASM2040362v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-10-09",
    "dateModified": "2021-10-09",
    "datePublished": "2021-10-09",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Chitinophagaceae bacterium"
        ],
        "sample_taxid": [
            "1869212"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Canada:Quebec,Champlain Lake"
        ],
        "sample_host_location_id": [],
        "data_size": "0.756 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 94.91,
        "contamination": 0.38,
        "strain_heterogeneity": 100.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "2631821",
        "Number of Sequences": "413",
        "Longest Sequences (bp)": "67169",
        "N50 (bp)": "7295",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "44.0",
        "Number of CDSs": "1862",
        "Average Protein Length": "321.5",
        "Coding Ratio (%)": "68.2",
        "Number of rRNAs": "3",
        "Number of tRNAs": "26",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Sediminibacterium ginsengisoli",
                "strain": "strain=DSM 22335",
                "accession": "GCA_900167075.1",
                "taxid": 413434,
                "species_taxid": 413434,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 51,
                "total_fragments": 672,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sediminibacterium soli",
                "strain": "strain=WSJ-3",
                "accession": "GCA_009939225.1",
                "taxid": 2698829,
                "species_taxid": 2698829,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.4436,
                "matched_fragments": 53,
                "total_fragments": 672,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sediminibacterium goheungense",
                "strain": "strain=DSM 28323",
                "accession": "GCA_004361915.1",
                "taxid": 1086393,
                "species_taxid": 1086393,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.2623,
                "matched_fragments": 56,
                "total_fragments": 672,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 94.91,
            "contamination": 0.38,
            "strain_heterogeneity": 100.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_016183765.1",
                "gtdb_species": "s__Sediminibacterium sp016183765",
                "ani": 76.699,
                "matched_fragments": 61,
                "total_fragments": 672,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Sediminibacterium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_013391385.1",
                "gtdb_species": "s__Sediminibacterium sp013391385",
                "ani": 76.6519,
                "matched_fragments": 51,
                "total_fragments": 672,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Sediminibacterium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016786865.1",
                "gtdb_species": "s__Sediminibacterium sp016786865",
                "ani": 76.4722,
                "matched_fragments": 52,
                "total_fragments": 672,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Sediminibacterium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_903899675.1",
                "gtdb_species": "s__Sediminibacterium sp903899675",
                "ani": 76.4396,
                "matched_fragments": 104,
                "total_fragments": 672,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Sediminibacterium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.92",
                "min_intra_species_ani": "99.92",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.95",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_903913355.1",
                "gtdb_species": "s__Sediminibacterium sp903913355",
                "ani": 76.4267,
                "matched_fragments": 52,
                "total_fragments": 672,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Sediminibacterium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_012270485.1",
                "gtdb_species": "s__Sediminibacterium sp012270485",
                "ani": 76.2999,
                "matched_fragments": 57,
                "total_fragments": 672,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Sediminibacterium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002973575.1",
                "gtdb_species": "s__Sediminibacterium magnilacihabitans",
                "ani": 76.2984,
                "matched_fragments": 62,
                "total_fragments": 672,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Sediminibacterium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.08",
                "min_intra_species_ani": "98.17",
                "mean_intra_species_af": "0.92",
                "min_intra_species_af": "0.85",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCF_004361915.1",
                "gtdb_species": "s__Sediminibacterium goheungense",
                "ani": 76.2623,
                "matched_fragments": 56,
                "total_fragments": 672,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Sediminibacterium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_004028765.1",
                "gtdb_species": "s__Sediminibacterium sp004028765",
                "ani": 76.0823,
                "matched_fragments": 62,
                "total_fragments": 672,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Chitinophagales;f__Chitinophagaceae;g__Sediminibacterium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.322,
        "cell_length": 0.364,
        "doubling_h": null,
        "growth_tmp": 30.538,
        "optimum_tmp": 29.829,
        "optimum_ph": 6.773,
        "genome_size": 5998721.602,
        "gc_content": 44.915,
        "coding_genes": 5429.047,
        "rRNA16S_genes": 3.5,
        "tRNA_genes": 54.0,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.225,
        "range_salinity": null,
        "facultative_respiration": 0.034,
        "anaerobic_respiration": 0.0,
        "aerobic_respiration": 0.965,
        "mesophilic_range_tmp": 0.75,
        "thermophilic_range_tmp": 0.0,
        "psychrophilic_range_tmp": 0.25,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Chitinophagales",
        "f__Chitinophagaceae",
        "g__Sediminibacterium",
        "s__Sediminibacterium sp020403455"
    ],
    "_genome_taxon": [
        "Chitinophagaceae",
        "bacterium",
        "d__Bacteria",
        "p__Bacteroidota",
        "c__Bacteroidia",
        "o__Chitinophagales",
        "f__Chitinophagaceae",
        "g__Sediminibacterium",
        "s__Sediminibacterium sp020403455",
        "Bacteria",
        "Bacteroidota",
        "Bacteroidia",
        "Chitinophagales",
        "Chitinophagaceae",
        "Sediminibacterium",
        "Sediminibacterium",
        "sp020403455"
    ],
    "_meo": [
        {
            "id": "MEO_0000038",
            "label": "freshwater"
        },
        {
            "id": "MEO_0001054",
            "label": "algal bloom"
        }
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}