{
    "type": "genome",
    "identifier": "GCA_020403895.1",
    "organism": "Pseudanabaena sp. M179S2SP2A07QC",
    "title": "Pseudanabaena sp. M179S2SP2A07QC",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "Universite de Montreal",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_020403895.1",
        "bioproject": "PRJNA662092",
        "biosample": "SAMN16074569",
        "wgs_master": "JADBWT000000000.1",
        "refseq_category": "na",
        "taxid": "2771251",
        "species_taxid": "2771251",
        "organism_name": "Pseudanabaena sp. M179S2SP2A07QC",
        "infraspecific_name": "",
        "isolate": "M179S2SP2A07QC",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/10/09",
        "asm_name": "ASM2040389v1",
        "submitter": "Universite de Montreal",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/020/403/895/GCA_020403895.1_ASM2040389v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-10-09",
    "dateModified": "2021-10-09",
    "datePublished": "2021-10-09",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Pseudanabaena sp. M179S2SP2A07QC"
        ],
        "sample_taxid": [
            "2771251"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Canada:Quebec,Champlain Lake"
        ],
        "sample_host_location_id": [],
        "data_size": "1.176 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 87.5,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "4128287",
        "Number of Sequences": "179",
        "Longest Sequences (bp)": "122483",
        "N50 (bp)": "32088",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "41.8",
        "Number of CDSs": "3829",
        "Average Protein Length": "289.7",
        "Coding Ratio (%)": "80.6",
        "Number of rRNAs": "0",
        "Number of tRNAs": "35",
        "Number of CRISPRs": "3"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
            "completeness": 87.5,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_006937785.1",
                "gtdb_species": "s__Pseudanabaena sp006937785",
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                "matched_fragments": 1042,
                "total_fragments": 1281,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Pseudanabaenales;f__Pseudanabaenaceae;g__Pseudanabaena",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_002914585.1",
                "gtdb_species": "s__Pseudanabaena sp002914585",
                "ani": 89.4934,
                "matched_fragments": 1023,
                "total_fragments": 1281,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Pseudanabaenales;f__Pseudanabaenaceae;g__Pseudanabaena",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_016584665.1",
                "gtdb_species": "s__Pseudanabaena sp016584665",
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                "total_fragments": 1281,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Pseudanabaenales;f__Pseudanabaenaceae;g__Pseudanabaena",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003249035.1",
                "gtdb_species": "s__Pseudanabaena sp003249035",
                "ani": 85.76,
                "matched_fragments": 856,
                "total_fragments": 1281,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Pseudanabaenales;f__Pseudanabaenaceae;g__Pseudanabaena",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_014696925.1",
                "gtdb_species": "s__Pseudanabaena sp014696925",
                "ani": 84.3477,
                "matched_fragments": 946,
                "total_fragments": 1281,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Pseudanabaenales;f__Pseudanabaenaceae;g__Pseudanabaena",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_002251945.1",
                "gtdb_species": "s__Pseudanabaena sp002251945",
                "ani": 84.0522,
                "matched_fragments": 906,
                "total_fragments": 1281,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Pseudanabaenales;f__Pseudanabaenaceae;g__Pseudanabaena",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_003242085.1",
                "gtdb_species": "s__Pseudanabaena frigida",
                "ani": 80.9068,
                "matched_fragments": 793,
                "total_fragments": 1281,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Pseudanabaenales;f__Pseudanabaenaceae;g__Pseudanabaena",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_003967015.1",
                "gtdb_species": "s__Pseudanabaena sp003967015",
                "ani": 80.7151,
                "matched_fragments": 780,
                "total_fragments": 1281,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Pseudanabaenales;f__Pseudanabaenaceae;g__Pseudanabaena",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_012863495.1",
                "gtdb_species": "s__Pseudanabaena yagii",
                "ani": 80.6225,
                "matched_fragments": 766,
                "total_fragments": 1281,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Pseudanabaenales;f__Pseudanabaenaceae;g__Pseudanabaena",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_903819605.1",
                "gtdb_species": "s__Pseudanabaena sp903819605",
                "ani": 80.5839,
                "matched_fragments": 608,
                "total_fragments": 1281,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Pseudanabaenales;f__Pseudanabaenaceae;g__Pseudanabaena",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.61",
                "min_intra_species_ani": "97.57",
                "mean_intra_species_af": "0.80",
                "min_intra_species_af": "0.79",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCF_014696355.1",
                "gtdb_species": "s__Pseudanabaena sp014696355",
                "ani": 80.1852,
                "matched_fragments": 684,
                "total_fragments": 1281,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Pseudanabaenales;f__Pseudanabaenaceae;g__Pseudanabaena",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": 21.0,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Cyanobacteriota",
        "c__Cyanobacteriia",
        "o__Pseudanabaenales",
        "f__Pseudanabaenaceae",
        "g__Pseudanabaena",
        "s__Pseudanabaena sp020404895"
    ],
    "_genome_taxon": [
        "Pseudanabaena",
        "sp.",
        "M179S2SP2A07QC",
        "d__Bacteria",
        "p__Cyanobacteriota",
        "c__Cyanobacteriia",
        "o__Pseudanabaenales",
        "f__Pseudanabaenaceae",
        "g__Pseudanabaena",
        "s__Pseudanabaena sp020404895",
        "Bacteria",
        "Cyanobacteriota",
        "Cyanobacteriia",
        "Pseudanabaenales",
        "Pseudanabaenaceae",
        "Pseudanabaena",
        "Pseudanabaena",
        "sp020404895"
    ],
    "_meo": [
        {
            "id": "MEO_0000038",
            "label": "freshwater"
        },
        {
            "id": "MEO_0001054",
            "label": "algal bloom"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}