{ "type": "genome", "identifier": "GCA_020427145.1", "organism": "Planctomycetales bacterium", "title": "Planctomycetales bacterium", "description": "derived from metagenome; genus undefined", "data type": "Genome sequencing and assembly", "organization": "The University Hong Kong", "publication": [ {} ], "properties": { "assembly_accession": "GCA_020427145.1", "bioproject": "PRJNA432264", "biosample": "SAMN14564043", "wgs_master": "JAGQOU000000000.1", "refseq_category": "na", "taxid": "2053591", "species_taxid": "2053591", "organism_name": "Planctomycetales bacterium", "infraspecific_name": "", "isolate": "HKST-UBA22", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/10/12", "asm_name": "ASM2042714v1", "submitter": "The University Hong Kong", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/020/427/145/GCA_020427145.1_ASM2042714v1", "excluded_from_refseq": "derived from metagenome; genus undefined", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-10-12", "dateModified": "2021-10-12", "datePublished": "2021-10-12", "_annotation": { "sample_count": 1, "sample_organism": [ "Planctomycetales bacterium" ], "sample_taxid": [ "2053591" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China:Hong Kong SAR, Shatin waste water treatment plant" ], "sample_host_location_id": [], "data_size": "1.642 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 75.41, "contamination": 1.04, "strain_heterogeneity": 50.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "5859107", "Number of Sequences": "567", "Longest Sequences (bp)": "126734", "N50 (bp)": "15223", "Gap Ratio (%)": "0.015787", "GCcontent (%)": "64.4", "Number of CDSs": "4088", "Average Protein Length": "350.4", "Coding Ratio (%)": "73.3", "Number of rRNAs": "1", "Number of tRNAs": "36", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Lacipirellula parvula", "strain": "strain=PX69", "accession": "GCA_009177095.1", "taxid": 2650471, "species_taxid": 2650471, "relation_to_type": "type", "validated": true, "ani": 76.5063, "matched_fragments": 269, "total_fragments": 1657, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Posidoniimonas corsicana", "strain": "strain=KOR34", "accession": "GCA_007859765.1", "taxid": 1938618, "species_taxid": 1938618, "relation_to_type": "type", "validated": true, "ani": 76.4185, "matched_fragments": 281, "total_fragments": 1657, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pirellulimonas nuda", "strain": "strain=Pla175", "accession": "GCA_007750855.1", "taxid": 2528009, "species_taxid": 2528009, "relation_to_type": "type", "validated": true, "ani": 76.4163, "matched_fragments": 210, "total_fragments": 1657, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Posidoniimonas polymericola", "strain": "strain=Pla123a", "accession": "GCA_007859935.1", "taxid": 2528002, "species_taxid": 2528002, "relation_to_type": "type", "validated": true, "ani": 76.3985, "matched_fragments": 276, "total_fragments": 1657, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudobythopirellula maris", "strain": "strain=Mal64", "accession": "GCA_007859945.1", "taxid": 2527991, "species_taxid": 2527991, "relation_to_type": "type", "validated": true, "ani": 76.3623, "matched_fragments": 216, "total_fragments": 1657, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Lacipirellula limnantheis", "strain": "strain=I41", "accession": "GCA_007746075.1", "taxid": 2528024, "species_taxid": 2528024, "relation_to_type": "type", "validated": true, "ani": 76.1723, "matched_fragments": 228, "total_fragments": 1657, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Botrimarina colliarenosi", "strain": "strain=Pla108", "accession": "GCA_007859955.1", "taxid": 2528001, "species_taxid": 2528001, "relation_to_type": "type", "validated": true, "ani": 76.1148, "matched_fragments": 177, "total_fragments": 1657, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Adhaeretor mobilis", "strain": "strain=HG15A2", "accession": "GCA_007741515.1", "taxid": 1930276, "species_taxid": 1930276, "relation_to_type": "type", "validated": true, "ani": 75.5685, "matched_fragments": 79, "total_fragments": 1657, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aeoliella mucimassa", "strain": "strain=Pan181", "accession": "GCA_007748035.1", "taxid": 2527972, "species_taxid": 2527972, "relation_to_type": "type", "validated": true, "ani": 75.552, "matched_fragments": 114, "total_fragments": 1657, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseimaritima sediminicola", "strain": "strain=JC651", "accession": "GCA_009618275.1", "taxid": 2662066, "species_taxid": 2662066, "relation_to_type": "type", "validated": true, "ani": 74.8917, "matched_fragments": 60, "total_fragments": 1657, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Klenkia marina", "strain": "strain=DSM 45722", "accession": "GCA_900101025.1", "taxid": 1960309, "species_taxid": 1960309, "relation_to_type": "type", "validated": true, "ani": 74.7473, "matched_fragments": 69, "total_fragments": 1657, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mycolicibacterium confluentis", "strain": "strain=JCM 13671", "accession": "GCA_010729895.1", "taxid": 28047, "species_taxid": 28047, "relation_to_type": "type", "validated": true, "ani": 74.651, "matched_fragments": 50, "total_fragments": 1657, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Modestobacter versicolor", "strain": "strain=DSM 16678", "accession": "GCA_014195485.1", "taxid": 429133, "species_taxid": 429133, "relation_to_type": "type", "validated": true, "ani": 74.6222, "matched_fragments": 83, "total_fragments": 1657, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Klenkia brasiliensis", "strain": "strain=DSM 44526", "accession": "GCA_900100695.1", "taxid": 333142, "species_taxid": 333142, "relation_to_type": "type", "validated": true, "ani": 74.5898, "matched_fragments": 87, "total_fragments": 1657, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 75.41, "contamination": 1.04, "strain_heterogeneity": 50.0 }, "gtdb_result": [ { "accession": "GCA_002702655.1", "gtdb_species": "s__GCA-2702655 sp002702655", "ani": 79.2788, "matched_fragments": 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