{ "type": "genome", "identifier": "GCA_020441205.1", "organism": "Maritimibacter sp.", "title": "Maritimibacter sp.", "description": "derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "The University Hong Kong", "publication": [ {} ], "properties": { "assembly_accession": "GCA_020441205.1", "bioproject": "PRJNA432264", "biosample": "SAMN14564403", "wgs_master": "JAGRMO000000000.1", "refseq_category": "na", "taxid": "2003363", "species_taxid": "2003363", "organism_name": "Maritimibacter sp.", "infraspecific_name": "", "isolate": "HKST-UBA93", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/10/12", "asm_name": "ASM2044120v1", "submitter": "The University Hong Kong", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/020/441/205/GCA_020441205.1_ASM2044120v1", "excluded_from_refseq": "derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-10-12", "dateModified": "2021-10-12", "datePublished": "2021-10-12", "_annotation": { "sample_count": 1, "sample_organism": [ "Maritimibacter sp." ], "sample_taxid": [ "2003363" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China:Hong Kong SAR, Shatin waste water treatment plant" ], "sample_host_location_id": [], "data_size": "0.968 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 60.42, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "3550063", "Number of Sequences": "342", "Longest Sequences (bp)": "90107", "N50 (bp)": "15999", "Gap Ratio (%)": "0.355712", "GCcontent (%)": "68.2", "Number of CDSs": "3345", "Average Protein Length": "278.8", "Coding Ratio (%)": "78.8", "Number of rRNAs": "0", "Number of tRNAs": "30", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Maritimibacter harenae", "strain": "strain=DP07", "accession": "GCA_009882975.1", "taxid": 2606218, "species_taxid": 2606218, "relation_to_type": "type", "validated": true, "ani": 78.5877, "matched_fragments": 440, "total_fragments": 1009, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Limimaricola pyoseonensis", "strain": "strain=DSM 21424", "accession": "GCA_900102015.1", "taxid": 521013, "species_taxid": 521013, "relation_to_type": "type", "validated": true, "ani": 78.1453, "matched_fragments": 411, "total_fragments": 1009, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Maritimibacter alkaliphilus", "strain": "strain=HTCC2654", "accession": "GCA_008124775.1", "taxid": 404236, "species_taxid": 404236, "relation_to_type": "type", "validated": true, "ani": 78.0296, "matched_fragments": 352, "total_fragments": 1009, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Maritimibacter alkaliphilus", "strain": "strain=HTCC2654", "accession": "GCA_000152805.1", "taxid": 404236, "species_taxid": 404236, "relation_to_type": "type", "validated": true, "ani": 78.0115, "matched_fragments": 361, "total_fragments": 1009, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Limimaricola variabilis", "strain": "strain=CECT 8572", "accession": "GCA_014195545.1", "taxid": 1492771, "species_taxid": 1492771, "relation_to_type": "type", "validated": true, "ani": 77.9712, "matched_fragments": 337, "total_fragments": 1009, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Maritimibacter alexandrii", "strain": "strain=LZ-17", "accession": "GCA_005871115.1", "taxid": 2570355, 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"ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Antarcticimicrobium luteum", "strain": "strain=318-1", "accession": "GCA_004358185.1", "taxid": 2547397, "species_taxid": 2547397, "relation_to_type": "type", "validated": true, "ani": 77.5655, "matched_fragments": 345, "total_fragments": 1009, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodovulum strictum", "strain": "strain=DSM 11289", "accession": "GCA_009649175.1", "taxid": 58314, "species_taxid": 58314, "relation_to_type": "type", "validated": true, "ani": 77.4244, "matched_fragments": 290, "total_fragments": 1009, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Leisingera daeponensis", "strain": "strain=DSM 23529", "accession": "GCA_000473145.1", "taxid": 405746, "species_taxid": 405746, "relation_to_type": "type", "validated": true, "ani": 77.2376, "matched_fragments": 288, "total_fragments": 1009, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseovarius litoreus", "strain": "strain=DSM 28249", "accession": "GCA_900142765.1", "taxid": 1155722, "species_taxid": 1155722, "relation_to_type": "type", "validated": true, "ani": 76.6237, "matched_fragments": 233, "total_fragments": 1009, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 60.42, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_014640115.1", "gtdb_species": "s__Muriiphilus lacisalsi", "ani": 80.5024, "matched_fragments": 549, "total_fragments": 1009, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Rhodobacterales;f__Rhodobacteraceae;g__Muriiphilus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002746935.1", "gtdb_species": "s__Muriiphilus sp002746935", "ani": 80.3522, 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