{
    "type": "genome",
    "identifier": "GCA_020525065.1",
    "organism": "Sulfurovum sp.",
    "title": "Sulfurovum sp.",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "HKUST",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_020525065.1",
        "bioproject": "PRJNA632343",
        "biosample": "SAMN15029594",
        "wgs_master": "JAIZOW000000000.1",
        "refseq_category": "na",
        "taxid": "1969726",
        "species_taxid": "1969726",
        "organism_name": "Sulfurovum sp.",
        "infraspecific_name": "",
        "isolate": "11-B",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/10/18",
        "asm_name": "ASM2052506v1",
        "submitter": "HKUST",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/020/525/065/GCA_020525065.1_ASM2052506v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-10-18",
    "dateModified": "2021-10-18",
    "datePublished": "2021-10-18",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Sulfurovum sp."
        ],
        "sample_taxid": [
            "1969726"
        ],
        "sample_host_organism": [
            "Alviniconcha marisindica"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Indian Ocean"
        ],
        "sample_host_location_id": [],
        "data_size": "0.412 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "1452799",
        "Number of Sequences": "109",
        "Longest Sequences (bp)": "96093",
        "N50 (bp)": "26545",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "37.5",
        "Number of CDSs": "1330",
        "Average Protein Length": "302.4",
        "Coding Ratio (%)": "83.1",
        "Number of rRNAs": "0",
        "Number of tRNAs": "43",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Sulfurovum indicum",
                "strain": "strain=ST-419",
                "accession": "GCA_014931715.1",
                "taxid": 2779528,
                "species_taxid": 2779528,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.043,
                "matched_fragments": 111,
                "total_fragments": 433,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sulfurovum lithotrophicum",
                "strain": "strain=ATCC BAA-797",
                "accession": "GCA_000987835.1",
                "taxid": 206403,
                "species_taxid": 206403,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.4801,
                "matched_fragments": 61,
                "total_fragments": 433,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_014931715.1",
                "gtdb_species": "s__Sulfurovum indicum",
                "ani": 78.043,
                "matched_fragments": 111,
                "total_fragments": 433,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurovaceae;g__Sulfurovum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000010345.1",
                "gtdb_species": "s__Sulfurovum sp000010345",
                "ani": 77.7589,
                "matched_fragments": 64,
                "total_fragments": 433,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurovaceae;g__Sulfurovum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_015493425.1",
                "gtdb_species": "s__Sulfurovum sp015493425",
                "ani": 77.6519,
                "matched_fragments": 72,
                "total_fragments": 433,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurovaceae;g__Sulfurovum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.37",
                "min_intra_species_ani": "98.02",
                "mean_intra_species_af": "0.82",
                "min_intra_species_af": "0.76",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_003934925.1",
                "gtdb_species": "s__Sulfurovum sp003934925",
                "ani": 77.5325,
                "matched_fragments": 79,
                "total_fragments": 433,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurovaceae;g__Sulfurovum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000987835.1",
                "gtdb_species": "s__Sulfurovum lithotrophicum",
                "ani": 77.4983,
                "matched_fragments": 62,
                "total_fragments": 433,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurovaceae;g__Sulfurovum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902727855.1",
                "gtdb_species": "s__Sulfurovum sp902727855",
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                "matched_fragments": 64,
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                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurovaceae;g__Sulfurovum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000296775.1",
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                "total_fragments": 433,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurovaceae;g__Sulfurovum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_016744875.1",
                "gtdb_species": "s__Sulfurovum sp016744875",
                "ani": 76.9623,
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                "total_fragments": 433,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurovaceae;g__Sulfurovum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_002742845.1",
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                "matched_fragments": 51,
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                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurovaceae;g__Sulfurovum",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.36",
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                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_013607775.1",
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                "matched_fragments": 85,
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                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurovaceae;g__Sulfurovum",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_011330645.1",
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                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_015661535.1",
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                "matched_fragments": 50,
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                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_016744315.1",
                "gtdb_species": "s__SZUA-451 sp016744315",
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                "matched_fragments": 57,
                "total_fragments": 433,
                "gtdb_taxonomy": "d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurovaceae;g__SZUA-451",
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                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.398,
        "cell_length": -0.302,
        "doubling_h": null,
        "growth_tmp": 31.666,
        "optimum_tmp": 29.0,
        "optimum_ph": 6.75,
        "genome_size": 2296291.375,
        "gc_content": 44.3,
        "coding_genes": 2127.333,
        "rRNA16S_genes": 3.0,
        "tRNA_genes": 44.0,
        "gram_stain": 0.0,
        "sporulation": 0.0,
        "motility": 0.0,
        "range_salinity": null,
        "facultative_respiration": 0.0,
        "anaerobic_respiration": 0.5,
        "aerobic_respiration": 0.5,
        "mesophilic_range_tmp": null,
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        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": 0.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 1.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_gtdb_taxon": [
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        "p__Campylobacterota",
        "c__Campylobacteria",
        "o__Campylobacterales",
        "f__Sulfurovaceae",
        "g__Sulfurovum",
        "s__Sulfurovum sp020525365"
    ],
    "_genome_taxon": [
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        "sp.",
        "d__Bacteria",
        "p__Campylobacterota",
        "c__Campylobacteria",
        "o__Campylobacterales",
        "f__Sulfurovaceae",
        "g__Sulfurovum",
        "s__Sulfurovum sp020525365",
        "Bacteria",
        "Campylobacterota",
        "Campylobacteria",
        "Campylobacterales",
        "Sulfurovaceae",
        "Sulfurovum",
        "Sulfurovum",
        "sp020525365"
    ],
    "_meo": [
        {
            "id": "MEO_0000031",
            "label": "hydrothermal vent"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}