{
    "type": "genome",
    "identifier": "GCA_020625445.1",
    "organism": "bacterium",
    "title": "bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "zhejiang university",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_020625445.1",
        "bioproject": "PRJNA730102",
        "biosample": "SAMN19217783",
        "wgs_master": "JAHLBT000000000.1",
        "refseq_category": "na",
        "taxid": "1869227",
        "species_taxid": "1869227",
        "organism_name": "bacterium",
        "infraspecific_name": "",
        "isolate": "bin680",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/10/26",
        "asm_name": "ASM2062544v1",
        "submitter": "zhejiang university",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/020/625/445/GCA_020625445.1_ASM2062544v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-10-26",
    "dateModified": "2021-10-26",
    "datePublished": "2021-10-26",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "bacterium"
        ],
        "sample_taxid": [
            "1869227"
        ],
        "sample_host_organism": [
            "cow"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China:Hangzhou"
        ],
        "sample_host_location_id": [],
        "data_size": "0.947 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 45.19,
        "strain_heterogeneity": 96.15,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "3299472",
        "Number of Sequences": "459",
        "Longest Sequences (bp)": "115832",
        "N50 (bp)": "19193",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "53.9",
        "Number of CDSs": "2747",
        "Average Protein Length": "303.7",
        "Coding Ratio (%)": "75.9",
        "Number of rRNAs": "2",
        "Number of tRNAs": "63",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [],
        "cc_result": {
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            "contamination": 45.19,
            "strain_heterogeneity": 96.15
        },
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Acutalibacteraceae;g__RUG420",
                "ani_circumscription_radius": 95.0,
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                "mean_intra_species_af": "0.96",
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                "status": "conclusive"
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                "mean_intra_species_ani": "98.00",
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                "mean_intra_species_af": "0.91",
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                "num_clustered_genomes": 3,
                "status": "-"
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                "num_clustered_genomes": 2,
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                "gtdb_species": "s__RUG420 sp017433225",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Acutalibacteraceae;g__RUG420",
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                "min_intra_species_af": "0.81",
                "num_clustered_genomes": 5,
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            {
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                "gtdb_species": "s__RUG420 sp017476565",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Acutalibacteraceae;g__RUG420",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.44",
                "min_intra_species_ani": "98.44",
                "mean_intra_species_af": "0.71",
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                "num_clustered_genomes": 2,
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            },
            {
                "accession": "GCA_900317985.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Acutalibacteraceae;g__RUG420",
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            },
            {
                "accession": "GCA_900317085.1",
                "gtdb_species": "s__RUG420 sp900317085",
                "ani": 77.5576,
                "matched_fragments": 118,
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                "num_clustered_genomes": 42,
                "status": "-"
            },
            {
                "accession": "GCA_017461005.1",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCA_900318715.1",
                "gtdb_species": "s__RUG420 sp900318715",
                "ani": 77.196,
                "matched_fragments": 108,
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Acutalibacteraceae;g__RUG420",
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                "mean_intra_species_ani": "98.71",
                "min_intra_species_ani": "98.49",
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                "min_intra_species_af": "0.81",
                "num_clustered_genomes": 3,
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            },
            {
                "accession": "GCA_017614275.1",
                "gtdb_species": "s__RUG420 sp017614275",
                "ani": 77.0217,
                "matched_fragments": 65,
                "total_fragments": 847,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Oscillospirales;f__Acutalibacteraceae;g__RUG420",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Oscillospirales",
        "f__Acutalibacteraceae",
        "g__RUG420",
        "s__RUG420 sp900315285"
    ],
    "_genome_taxon": [
        "bacterium",
        "d__Bacteria",
        "p__Bacillota_A",
        "c__Clostridia",
        "o__Oscillospirales",
        "f__Acutalibacteraceae",
        "g__RUG420",
        "s__RUG420 sp900315285",
        "Bacteria",
        "Bacillota",
        "A",
        "Clostridia",
        "Oscillospirales",
        "Acutalibacteraceae",
        "RUG420",
        "RUG420",
        "sp900315285"
    ],
    "_meo": [
        {
            "id": "MEO_0000046",
            "label": "rumen"
        }
    ],
    "quality": 2,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f"
}