{ "type": "genome", "identifier": "GCA_020633155.1", "organism": "Sandaracinus sp.", "title": "Sandaracinus sp.", "description": "derived from metagenome", "data type": "Genome sequencing and assembly", "organization": "The University of Hong Kong", "publication": [ {} ], "properties": { "assembly_accession": "GCA_020633155.1", "bioproject": "PRJNA648801", "biosample": "SAMN15687767", "wgs_master": "JACKEF000000000.1", "refseq_category": "na", "taxid": "2024858", "species_taxid": "2024858", "organism_name": "Sandaracinus sp.", "infraspecific_name": "", "isolate": "HK-STAS-MYXO-26", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/10/26", "asm_name": "ASM2063315v1", "submitter": "The University of Hong Kong", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/020/633/155/GCA_020633155.1_ASM2063315v1", "excluded_from_refseq": "derived from metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-10-26", "dateModified": "2021-10-26", "datePublished": "2021-10-26", "_annotation": { "sample_count": 1, "sample_organism": [ "Sandaracinus sp." ], "sample_taxid": [ "2024858" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China: Hong Kong Special Administrative Region" ], "sample_host_location_id": [], "data_size": "2.313 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 67.05, "contamination": 1.85, "strain_heterogeneity": 100.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "8676734", "Number of Sequences": "225", "Longest Sequences (bp)": "520587", "N50 (bp)": "104629", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "69.8", "Number of CDSs": "6957", "Average Protein Length": "353.0", "Coding Ratio (%)": "84.9", "Number of rRNAs": "1", "Number of tRNAs": "60", "Number of CRISPRs": "5" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Sandaracinus amylolyticus", "strain": "strain=DSM 53668", "accession": "GCA_000737325.2", "taxid": 927083, "species_taxid": 927083, "relation_to_type": "type", "validated": true, "ani": 75.9752, "matched_fragments": 1086, "total_fragments": 2771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Labilithrix luteola", "strain": "strain=DSM 27648", "accession": "GCA_001263205.1", "taxid": 1391654, "species_taxid": 1391654, "relation_to_type": "type", "validated": true, "ani": 75.4378, "matched_fragments": 486, "total_fragments": 2771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Vulgatibacter incomptus", "strain": "strain=DSM 27710", "accession": "GCA_001263175.1", "taxid": 1391653, "species_taxid": 1391653, "relation_to_type": "type", "validated": true, "ani": 75.2533, "matched_fragments": 196, "total_fragments": 2771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Polyangium aurulentum", "strain": "strain=SDU3-1", "accession": "GCA_005144635.2", "taxid": 2567896, "species_taxid": 2567896, "relation_to_type": "type", "validated": true, "ani": 75.2062, "matched_fragments": 598, "total_fragments": 2771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Polyangium fumosum", "strain": "strain=DSM 14668", "accession": "GCA_005144585.1", "taxid": 889272, "species_taxid": 889272, "relation_to_type": "neotype", "validated": true, "ani": 75.1762, "matched_fragments": 626, "total_fragments": 2771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Polyangium spumosum", "strain": "strain=DSM 14734", "accession": "GCA_009649845.1", "taxid": 889282, "species_taxid": 889282, "relation_to_type": "type", "validated": true, "ani": 75.1705, "matched_fragments": 678, "total_fragments": 2771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoxanthomonas winnipegensis", "strain": "strain=NML 130738", "accession": "GCA_004283755.1", "taxid": 2480810, "species_taxid": 2480810, "relation_to_type": "type", "validated": true, "ani": 75.1187, "matched_fragments": 110, "total_fragments": 2771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseomonas rhizosphaerae", "strain": "strain=YW11", "accession": "GCA_002631185.1", "taxid": 1335062, "species_taxid": 1335062, "relation_to_type": "type", "validated": true, "ani": 75.0992, "matched_fragments": 121, "total_fragments": 2771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Luteimonas aestuarii", "strain": "strain=B9", "accession": "GCA_004357985.1", "taxid": 453837, "species_taxid": 453837, "relation_to_type": "type", "validated": true, "ani": 75.0671, "matched_fragments": 82, "total_fragments": 2771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arenimonas metalli", "strain": "strain=CF5-1", "accession": "GCA_000747155.1", "taxid": 948077, "species_taxid": 948077, "relation_to_type": "type", "validated": true, "ani": 75.0408, "matched_fragments": 133, "total_fragments": 2771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Anaeromyxobacter dehalogenans", "strain": "strain=2CP-1", "accession": "GCA_000022145.1", "taxid": 161493, "species_taxid": 161493, "relation_to_type": "type", "validated": true, "ani": 74.9976, "matched_fragments": 340, "total_fragments": 2771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Luteimonas colneyensis", "strain": "strain=Sa2BVA3", "accession": "GCA_014836665.1", "taxid": 2762230, "species_taxid": 2762230, "relation_to_type": "type", "validated": true, "ani": 74.9936, "matched_fragments": 140, "total_fragments": 2771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nannocystis exedens", "strain": "strain=ATCC 25963", "accession": "GCA_900112715.1", "taxid": 54, "species_taxid": 54, "relation_to_type": "type", "validated": true, "ani": 74.9665, "matched_fragments": 609, "total_fragments": 2771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thermomonas haemolytica", "strain": "strain=LMG 19653", "accession": "GCA_006352395.1", "taxid": 141949, "species_taxid": 141949, "relation_to_type": "type", "validated": true, "ani": 74.9492, "matched_fragments": 84, "total_fragments": 2771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Luteimonas wenzhouensis", "strain": "strain=YD-1", "accession": "GCA_007859305.1", "taxid": 2599615, "species_taxid": 2599615, "relation_to_type": "type", "validated": true, "ani": 74.9451, "matched_fragments": 160, "total_fragments": 2771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nannocystis exedens", "strain": "strain=DSM 71", "accession": "GCA_002343915.1", "taxid": 54, "species_taxid": 54, "relation_to_type": "type", "validated": true, "ani": 74.9432, "matched_fragments": 625, "total_fragments": 2771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides phosphati", "strain": "strain=CGMCC 4.7371", "accession": "GCA_014646375.1", "taxid": 1867775, "species_taxid": 1867775, "relation_to_type": "type", "validated": true, "ani": 74.922, "matched_fragments": 199, "total_fragments": 2771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aurantimonas endophytica", "strain": "strain=DSM 103570", "accession": "GCA_014196845.1", "taxid": 1522175, "species_taxid": 1522175, "relation_to_type": "type", "validated": true, "ani": 74.8982, "matched_fragments": 130, "total_fragments": 2771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Frateuria flava", "strain": "strain=MAH-13", "accession": "GCA_017837635.1", "taxid": 2821489, "species_taxid": 2821489, "relation_to_type": "type", "validated": true, "ani": 74.8966, "matched_fragments": 110, "total_fragments": 2771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Propioniciclava coleopterorum", "strain": "strain=HDW11", "accession": "GCA_011393335.1", "taxid": 2714937, "species_taxid": 2714937, "relation_to_type": "type", "validated": true, "ani": 74.8859, "matched_fragments": 170, "total_fragments": 2771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas oryzae", "strain": "strain=KCTC 32247", "accession": "GCA_900104805.1", "taxid": 1392877, "species_taxid": 1392877, "relation_to_type": "type", "validated": true, "ani": 74.8753, "matched_fragments": 119, "total_fragments": 2771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Devosia enhydra", "strain": "strain=ATCC 23634", "accession": "GCA_900119845.1", "taxid": 665118, "species_taxid": 665118, "relation_to_type": "type", "validated": true, "ani": 74.8721, "matched_fragments": 58, "total_fragments": 2771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides glacieisoli", "strain": "strain=HLT3-15", "accession": "GCA_004137245.1", "taxid": 1168730, "species_taxid": 1168730, "relation_to_type": "type", "validated": true, "ani": 74.8682, "matched_fragments": 216, "total_fragments": 2771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Lysobacter antibioticus", "strain": "strain=ATCC 29479", "accession": "GCA_001442535.1", "taxid": 84531, "species_taxid": 84531, "relation_to_type": "type", "validated": true, "ani": 74.8519, "matched_fragments": 167, "total_fragments": 2771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aurantimonas endophytica", "strain": "strain=KCTC 52296", "accession": "GCA_024105745.1", "taxid": 1522175, "species_taxid": 1522175, "relation_to_type": "type", "validated": true, "ani": 74.8392, "matched_fragments": 131, "total_fragments": 2771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sinomonas susongensis", "strain": "strain=A31", "accession": "GCA_005877005.1", "taxid": 1324851, "species_taxid": 1324851, "relation_to_type": "type", "validated": true, "ani": 74.8163, "matched_fragments": 103, "total_fragments": 2771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Dyella solisilvae", "strain": "strain=DHG54", "accession": "GCA_003351225.1", "taxid": 1920168, "species_taxid": 1920168, "relation_to_type": "type", "validated": true, "ani": 74.8127, "matched_fragments": 90, "total_fragments": 2771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Lentzea alba", "strain": "strain=NEAU-D13", "accession": "GCA_011067745.1", "taxid": 2714351, "species_taxid": 2714351, "relation_to_type": "type", "validated": true, "ani": 74.8042, "matched_fragments": 270, "total_fragments": 2771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Lentzea pudingi", "strain": "strain=CGMCC 4.7319", "accession": "GCA_014646255.1", "taxid": 1789439, "species_taxid": 1789439, "relation_to_type": "type", "validated": true, "ani": 74.7975, "matched_fragments": 261, "total_fragments": 2771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Lentzea kentuckyensis", "strain": "strain=NRRL B-24416", "accession": "GCA_002150765.1", "taxid": 360086, "species_taxid": 360086, "relation_to_type": "type", "validated": true, "ani": 74.7782, "matched_fragments": 281, "total_fragments": 2771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides ganghwensis", "strain": "strain=9920", "accession": "GCA_014779655.1", "taxid": 252230, "species_taxid": 252230, "relation_to_type": "type", "validated": true, "ani": 74.7524, "matched_fragments": 229, "total_fragments": 2771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Lentzea aerocolonigenes", "strain": "strain=NRRL B-3298", "accession": "GCA_000719205.1", "taxid": 68170, "species_taxid": 68170, "relation_to_type": "type", "validated": true, "ani": 74.7317, "matched_fragments": 269, "total_fragments": 2771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bifidobacterium eulemuris", "strain": "strain=DSM 100216", "accession": "GCA_014898155.1", "taxid": 1765219, "species_taxid": 1765219, "relation_to_type": "type", "validated": true, "ani": 74.6859, "matched_fragments": 50, "total_fragments": 2771, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardia harenae", "strain": "strain=NBRC 108248", "accession": "GCA_001612885.1", "taxid": 358707, "species_taxid": 358707, "relation_to_type": "type", "validated": true, "ani": 74.6681, "matched_fragments": 241, "total_fragments": 2771, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 67.05, "contamination": 1.85, "strain_heterogeneity": 100.0 }, "gtdb_result": [ { "accession": "GCA_002699025.1", "gtdb_species": "s__GCA-2699025 sp002699025", "ani": 77.6614, "matched_fragments": 1096, "total_fragments": 2771, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__SG8-38;g__GCA-2699025", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.90", "min_intra_species_ani": "99.85", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.97", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCA_017644045.1", "gtdb_species": "s__UBA1660 sp017644045", "ani": 77.1542, "matched_fragments": 833, "total_fragments": 2771, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__SG8-38;g__UBA1660", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002320815.1", "gtdb_species": "s__UBA1660 sp002320815", "ani": 76.8181, "matched_fragments": 657, "total_fragments": 2771, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__SG8-38;g__UBA1660", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.96", "min_intra_species_ani": "99.96", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.96", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_012744445.1", "gtdb_species": "s__JAAYBZ01 sp012744445", "ani": 76.3598, "matched_fragments": 424, "total_fragments": 2771, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__SG8-38;g__JAAYBZ01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_016706685.1", "gtdb_species": "s__JADJJE01 sp016706685", "ani": 76.223, "matched_fragments": 436, "total_fragments": 2771, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__SG8-38;g__JADJJE01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.15", "min_intra_species_ani": "99.06", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.90", "num_clustered_genomes": 7, "status": "-" }, { "accession": "GCA_013151775.1", "gtdb_species": "s__JAADHO01 sp013151775", "ani": 76.0816, "matched_fragments": 350, "total_fragments": 2771, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__SG8-38;g__JAADHO01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000737325.1", "gtdb_species": "s__Sandaracinus amylolyticus", "ani": 75.98, "matched_fragments": 1079, "total_fragments": 2771, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Sandaracinaceae;g__Sandaracinus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_017303575.1", "gtdb_species": "s__JAFLCL01 sp017303575", "ani": 75.8818, "matched_fragments": 713, "total_fragments": 2771, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Sandaracinaceae;g__JAFLCL01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_003647065.1", "gtdb_species": "s__B10-G4 sp003647065", "ani": 75.8272, "matched_fragments": 323, "total_fragments": 2771, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__SG8-38;g__B10-G4", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_004283055.1", "gtdb_species": "s__SG8-38 sp004283055", "ani": 75.7261, "matched_fragments": 148, "total_fragments": 2771, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__SG8-38;g__SG8-38", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.78", "min_intra_species_ani": "99.72", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.90", "num_clustered_genomes": 8, "status": "-" }, { "accession": "GCA_017881055.1", "gtdb_species": "s__JADGRF01 sp017881055", "ani": 75.672, "matched_fragments": 280, "total_fragments": 2771, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__JAFGIB01;g__JADGRF01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_017881185.1", "gtdb_species": "s__JADGRF01 sp017881185", "ani": 75.6411, "matched_fragments": 226, "total_fragments": 2771, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__JAFGIB01;g__JADGRF01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_018333835.1", "gtdb_species": "s__Silanimonas sp018333835", "ani": 75.2657, "matched_fragments": 106, "total_fragments": 2771, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Silanimonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001931535.1", "gtdb_species": "s__Minicystis rosea", "ani": 75.1925, "matched_fragments": 721, "total_fragments": 2771, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__Minicystis", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_016191785.1", "gtdb_species": "s__JADJKB01 sp016191785", "ani": 75.149, "matched_fragments": 364, "total_fragments": 2771, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Polyangiaceae;g__JADJKB01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_014879945.1", "gtdb_species": "s__JAEUJQ01 sp014879945", "ani": 75.1375, "matched_fragments": 382, "total_fragments": 2771, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Myxococcia;o__Myxococcales;f__Myxococcaceae;g__JAEUJQ01", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001428685.1", "gtdb_species": "s__Lysobacter sp001428685", "ani": 75.049, "matched_fragments": 145, "total_fragments": 2771, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Lysobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.42", "min_intra_species_ani": "98.61", "mean_intra_species_af": "0.98", "min_intra_species_af": "0.96", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCA_016793325.1", "gtdb_species": "s__Ga0077539 sp016793325", "ani": 75.0371, "matched_fragments": 631, "total_fragments": 2771, "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Polyangia;o__Polyangiales;f__Ga0077539;g__Ga0077539", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000747155.1", "gtdb_species": "s__Arenimonas metalli", "ani": 75.0323, "matched_fragments": 135, "total_fragments": 2771, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Arenimonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001442515.1", "gtdb_species": "s__Lysobacter enzymogenes_B", "ani": 74.8324, "matched_fragments": 247, "total_fragments": 2771, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Lysobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.93", "min_intra_species_ani": "95.70", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.91", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_016267665.1", "gtdb_species": "s__Curtobacterium sp016267665", "ani": 74.798, "matched_fragments": 165, "total_fragments": 2771, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Curtobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002849595.1", "gtdb_species": "s__Luteimonas sp002849595", "ani": 74.7796, "matched_fragments": 168, "total_fragments": 2771, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Xanthomonadales;f__Xanthomonadaceae;g__Luteimonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.97", "min_intra_species_ani": "99.97", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": -0.071, "cell_length": 0.653, "doubling_h": null, "growth_tmp": 28.0, "optimum_tmp": 30.0, "optimum_ph": 7.0, "genome_size": 10237344.0, "gc_content": 69.7, "coding_genes": 8712.667, "rRNA16S_genes": 2.0, "tRNA_genes": 59.0, "gram_stain": 0.0, "sporulation": 1.0, "motility": 1.0, "range_salinity": null, "facultative_respiration": 0.0, "anaerobic_respiration": 0.0, "aerobic_respiration": 1.0, "mesophilic_range_tmp": null, "thermophilic_range_tmp": null, "psychrophilic_range_tmp": null, "bacillus_cell_shape": 1.0, "coccus_cell_shape": 0.0, "filament_cell_shape": 0.0, "coccobacillus_cell_shape": 0.0, "vibrio_cell_shape": 0.0, "spiral_cell_shape": 0.0 }, "_gtdb_taxon": [ "d__Bacteria", "p__Myxococcota", "c__Polyangia", "o__Polyangiales", "f__SG8-38", "g__JACKEH01", "s__JACKEH01 sp020633125" ], "_genome_taxon": [ "Sandaracinus", "sp.", "d__Bacteria", "p__Myxococcota", "c__Polyangia", "o__Polyangiales", "f__SG8-38", "g__JACKEH01", "s__JACKEH01 sp020633125", "Bacteria", "Myxococcota", "Polyangia", "Polyangiales", "SG8-38", "JACKEH01", "JACKEH01", "sp020633125" ], "_meo": [ { "id": "MEO_0000014", "label": "activated sludge" } ], "quality": 3, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }