{
    "type": "genome",
    "identifier": "GCA_020696885.1",
    "organism": "Armatimonadota bacterium",
    "title": "Armatimonadota bacterium",
    "description": "derived from metagenome; genus undefined",
    "data type": "Genome sequencing and assembly",
    "organization": "Colorado State University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_020696885.1",
        "bioproject": "PRJNA725542",
        "biosample": "SAMN20393787",
        "wgs_master": "JAJFMS000000000.1",
        "refseq_category": "na",
        "taxid": "2033014",
        "species_taxid": "2033014",
        "organism_name": "Armatimonadota bacterium",
        "infraspecific_name": "",
        "isolate": "C_No_T20_A_bin.51",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/11/01",
        "asm_name": "ASM2069688v1",
        "submitter": "Colorado State University",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/020/696/885/GCA_020696885.1_ASM2069688v1",
        "excluded_from_refseq": "derived from metagenome; genus undefined",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-11-01",
    "dateModified": "2021-11-01",
    "datePublished": "2021-11-01",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Armatimonadota bacterium"
        ],
        "sample_taxid": [
            "2033014"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA: Colorado, Fort Collins"
        ],
        "sample_host_location_id": [],
        "data_size": "1.659 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 60.19,
        "contamination": 4.17,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "5948649",
        "Number of Sequences": "1191",
        "Longest Sequences (bp)": "22828",
        "N50 (bp)": "5300",
        "Gap Ratio (%)": "0.002034",
        "GCcontent (%)": "67.5",
        "Number of CDSs": "3893",
        "Average Protein Length": "318.0",
        "Coding Ratio (%)": "62.4",
        "Number of rRNAs": "0",
        "Number of tRNAs": "38",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Actinosynnema mirum",
                "strain": "strain=DSM 43827",
                "accession": "GCA_000023245.1",
                "taxid": 40567,
                "species_taxid": 40567,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.9525,
                "matched_fragments": 124,
                "total_fragments": 1406,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Actinomycetospora endophytica",
                "strain": "strain=TBRC 5722",
                "accession": "GCA_021026375.1",
                "taxid": 2291215,
                "species_taxid": 2291215,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.8495,
                "matched_fragments": 81,
                "total_fragments": 1406,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Kribbella turkmenica",
                "strain": "strain=16K104",
                "accession": "GCA_004348725.1",
                "taxid": 2530375,
                "species_taxid": 2530375,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.808,
                "matched_fragments": 67,
                "total_fragments": 1406,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Amycolatopsis jiangsuensis",
                "strain": "strain=DSM 45859",
                "accession": "GCA_014204865.1",
                "taxid": 1181879,
                "species_taxid": 1181879,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.7647,
                "matched_fragments": 88,
                "total_fragments": 1406,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 60.19,
            "contamination": 4.17,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCA_005798285.1",
                "gtdb_species": "s__F1-80-MAGs030 sp005798285",
                "ani": 75.7962,
                "matched_fragments": 78,
                "total_fragments": 1406,
                "gtdb_taxonomy": "d__Bacteria;p__Armatimonadota;c__SYMT01;o__SYMT01;f__SYMT01;g__F1-80-MAGs030",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_005805375.1",
                "gtdb_species": "s__SYMT01 sp005805375",
                "ani": 75.3697,
                "matched_fragments": 120,
                "total_fragments": 1406,
                "gtdb_taxonomy": "d__Bacteria;p__Armatimonadota;c__SYMT01;o__SYMT01;f__SYMT01;g__SYMT01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000023245.1",
                "gtdb_species": "s__Actinosynnema mirum",
                "ani": 74.9573,
                "matched_fragments": 123,
                "total_fragments": 1406,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Pseudonocardiaceae;g__Actinosynnema",
                "ani_circumscription_radius": 96.4703,
                "mean_intra_species_ani": "99.51",
                "min_intra_species_ani": "99.51",
                "mean_intra_species_af": "0.95",
                "min_intra_species_af": "0.95",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_016199585.1",
                "gtdb_species": "s__JACQGM01 sp016199585",
                "ani": 74.9333,
                "matched_fragments": 59,
                "total_fragments": 1406,
                "gtdb_taxonomy": "d__Bacteria;p__Armatimonadota;c__SYMT01;o__JAAZEB01;f__JAAZEB01;g__JACQGM01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_902805585.1",
                "gtdb_species": "s__CADCTO01 sp902805585",
                "ani": 74.8933,
                "matched_fragments": 60,
                "total_fragments": 1406,
                "gtdb_taxonomy": "d__Bacteria;p__Armatimonadota;c__Armatimonadia;o__Armatimonadales;f__Armatimonadaceae;g__CADCTO01",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_002354875.1",
                "gtdb_species": "s__Actinosynnema auranticum",
                "ani": 74.8477,
                "matched_fragments": 141,
                "total_fragments": 1406,
                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Pseudonocardiaceae;g__Actinosynnema",
                "ani_circumscription_radius": 96.4703,
                "mean_intra_species_ani": "100.00",
                "min_intra_species_ani": "100.00",
                "mean_intra_species_af": "1.00",
                "min_intra_species_af": "1.00",
                "num_clustered_genomes": 2,
                "status": "-"
            },
            {
                "accession": "GCA_018266075.1",
                "gtdb_species": "s__SZAS-1 sp018266075",
                "ani": 74.8202,
                "matched_fragments": 83,
                "total_fragments": 1406,
                "gtdb_taxonomy": "d__Bacteria;p__Myxococcota;c__Myxococcia;o__Myxococcales;f__SZAS-1;g__SZAS-1",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Armatimonadota",
        "c__SYMT01",
        "o__SYMT01",
        "f__SYMT01",
        "g__JAJFMS01",
        "s__JAJFMS01 sp020696885"
    ],
    "_genome_taxon": [
        "Armatimonadota",
        "bacterium",
        "d__Bacteria",
        "p__Armatimonadota",
        "c__SYMT01",
        "o__SYMT01",
        "f__SYMT01",
        "g__JAJFMS01",
        "s__JAJFMS01 sp020696885",
        "Bacteria",
        "Armatimonadota",
        "SYMT01",
        "SYMT01",
        "SYMT01",
        "JAJFMS01",
        "JAJFMS01",
        "sp020696885"
    ],
    "_meo": [
        {
            "id": "MEO_0000007",
            "label": "soil"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}