{ "type": "genome", "identifier": "GCA_020697555.1", "organism": "Blautia producta", "title": "Blautia producta", "description": "derived from metagenome; incomplete metagenome", "data type": "Genome sequencing and assembly", "organization": "QuantHealth", "publication": [ {} ], "properties": { "assembly_accession": "GCA_020697555.1", "bioproject": "PRJNA771491", "biosample": "SAMN22312453", "wgs_master": "JAJFZD000000000.1", "refseq_category": "na", "taxid": "33035", "species_taxid": "33035", "organism_name": "Blautia producta", "infraspecific_name": "", "isolate": "I2DA", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/11/01", "asm_name": "ASM2069755v1", "submitter": "QuantHealth", "gbrs_paired_asm": "na", "paired_asm_comp": "na", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/020/697/555/GCA_020697555.1_ASM2069755v1", "excluded_from_refseq": "derived from metagenome; incomplete metagenome", "relation_to_type_material": "", "asm_not_live_date": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-11-01", "dateModified": "2021-11-01", "datePublished": "2021-11-01", "_annotation": { "sample_count": 1, "sample_organism": [ "Blautia producta" ], "sample_taxid": [ "33035" ], "sample_host_organism": [ "Homo sapiens" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China" ], "sample_host_location_id": [], "data_size": "1.719 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "MAG", "data_source": "INSDC", "_dfast": { "Total Sequence Length (bp)": "6080524", "Number of Sequences": "39", "Longest Sequences (bp)": "765597", "N50 (bp)": "308582", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "45.9", "Number of CDSs": "5326", "Average Protein Length": "340.9", "Coding Ratio (%)": "89.6", "Number of rRNAs": "0", "Number of tRNAs": "59", "Number of CRISPRs": "5" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Blautia coccoides", "strain": "strain=DSM 935", "accession": "GCA_004340925.1", "taxid": 1532, "species_taxid": 1532, "relation_to_type": "type", "validated": true, "ani": 98.8696, "matched_fragments": 1683, "total_fragments": 2006, "ani_threshold": 95, "status": "inconclusive" }, { "organism_name": "Blautia coccoides", "strain": "strain=NCTC11035", "accession": "GCA_900461125.1", "taxid": 1532, "species_taxid": 1532, "relation_to_type": "type", "validated": true, "ani": 98.7978, "matched_fragments": 1707, "total_fragments": 2006, "ani_threshold": 95, "status": "inconclusive" }, { "organism_name": "Blautia producta", "strain": "strain=DSM 2950", "accession": "GCA_000439125.1", "taxid": 33035, "species_taxid": 33035, "relation_to_type": "suspected-type", "validated": true, "ani": 98.1635, "matched_fragments": 1579, "total_fragments": 2006, "ani_threshold": 95, "status": "inconclusive" }, { "organism_name": "Blautia producta", "strain": "strain=ATCC 27340", "accession": "GCA_000373885.1", "taxid": 33035, "species_taxid": 33035, "relation_to_type": "suspected-type", "validated": true, "ani": 98.1487, "matched_fragments": 1589, "total_fragments": 2006, "ani_threshold": 95, "status": "inconclusive" }, { "organism_name": "Blautia producta", "strain": "strain=DSM 2950", "accession": "GCA_014131715.1", "taxid": 33035, "species_taxid": 33035, "relation_to_type": "suspected-type", "validated": true, "ani": 98.1326, "matched_fragments": 1597, "total_fragments": 2006, "ani_threshold": 95, "status": "inconclusive" }, { "organism_name": "Blautia producta", "strain": "strain=JCM 1471", "accession": "GCA_010669205.1", "taxid": 33035, "species_taxid": 33035, "relation_to_type": "suspected-type", "validated": true, "ani": 98.1324, "matched_fragments": 1601, "total_fragments": 2006, "ani_threshold": 95, "status": "inconclusive" }, { "organism_name": "Blautia marasmi", "strain": "strain=Marseille-P2377", "accession": "GCA_900258535.1", "taxid": 1917868, "species_taxid": 1917868, "relation_to_type": "suspected-type", "validated": true, "ani": 85.1026, "matched_fragments": 1367, "total_fragments": 2006, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Anaerostipes rhamnosivorans", "strain": "strain=1y2", "accession": "GCA_005280655.1", "taxid": 1229621, "species_taxid": 1229621, "relation_to_type": "type", "validated": true, "ani": 80.2229, "matched_fragments": 63, "total_fragments": 2006, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseburia lenta", "strain": "strain=NSJ-9", "accession": "GCA_014287435.1", "taxid": 2763061, "species_taxid": 2763061, "relation_to_type": "type", "validated": true, "ani": 78.3027, "matched_fragments": 52, "total_fragments": 2006, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Marvinbryantia formatexigens", "strain": "strain=DSM 14469", "accession": "GCA_025148285.1", "taxid": 168384, "species_taxid": 168384, "relation_to_type": "type", "validated": true, "ani": 77.4413, "matched_fragments": 95, "total_fragments": 2006, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Diplocloster agilis", "strain": "strain=ASD5720", "accession": "GCA_019042275.1", "taxid": 2850323, "species_taxid": 2850323, "relation_to_type": "type", "validated": true, "ani": 76.8567, "matched_fragments": 88, "total_fragments": 2006, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_900461125.1", "gtdb_species": "s__Blautia coccoides", "ani": 98.8002, "matched_fragments": 1707, "total_fragments": 2006, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Blautia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.33", "min_intra_species_ani": "97.47", "mean_intra_species_af": "0.84", "min_intra_species_af": "0.79", "num_clustered_genomes": 11, "status": "conclusive" }, { "accession": "GCF_014287615.1", "gtdb_species": "s__Blautia sp001304935", "ani": 85.5183, "matched_fragments": 1335, "total_fragments": 2006, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Blautia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.32", "min_intra_species_ani": "98.73", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.87", "num_clustered_genomes": 9, "status": "-" }, { "accession": "GCF_001689125.2", "gtdb_species": "s__Blautia pseudococcoides", "ani": 85.1884, "matched_fragments": 1177, "total_fragments": 2006, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Blautia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.82", "min_intra_species_ani": "99.56", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.91", "num_clustered_genomes": 7, "status": "-" }, { "accession": "GCA_002270465.1", "gtdb_species": "s__Blautia hominis", "ani": 85.0062, "matched_fragments": 1337, "total_fragments": 2006, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Blautia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.84", "min_intra_species_ani": "98.04", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.81", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCA_003481745.1", "gtdb_species": "s__Blautia stercoris", "ani": 78.4081, "matched_fragments": 203, "total_fragments": 2006, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Blautia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.69", "min_intra_species_ani": "97.83", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.84", "num_clustered_genomes": 8, "status": "-" }, { "accession": "GCF_002161285.1", "gtdb_species": "s__Blautia ornithocaccae", "ani": 78.377, "matched_fragments": 244, "total_fragments": 2006, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Blautia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.34", "min_intra_species_ani": "98.05", "mean_intra_species_af": "0.87", "min_intra_species_af": "0.83", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_003477525.1", "gtdb_species": "s__Blautia_A sp003477525", "ani": 78.3638, "matched_fragments": 133, "total_fragments": 2006, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Blautia_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.30", "min_intra_species_ani": "98.60", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.81", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_900129135.1", "gtdb_species": "s__Lactonifactor longoviformis", "ani": 77.788, "matched_fragments": 147, "total_fragments": 2006, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Lactonifactor", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCA_900765525.1", "gtdb_species": "s__Blautia pullicola", "ani": 77.4947, "matched_fragments": 202, "total_fragments": 2006, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Blautia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.10", "min_intra_species_ani": "98.67", "mean_intra_species_af": "0.84", "min_intra_species_af": "0.76", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCA_900546325.1", "gtdb_species": "s__Faecalimonas sp900546325", "ani": 77.4846, "matched_fragments": 65, "total_fragments": 2006, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Faecalimonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.83", "min_intra_species_ani": "99.66", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.88", "num_clustered_genomes": 3, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": 0.0, "cell_length": 0.0, "doubling_h": 0.255, "growth_tmp": 37.0, "optimum_tmp": 37.0, "optimum_ph": 7.0, "genome_size": 6069154.333, "gc_content": 41.729, "coding_genes": 2948.5, "rRNA16S_genes": 5.0, "tRNA_genes": 65.0, "gram_stain": 1.0, "sporulation": 0.0, "motility": 0.0, "range_salinity": 0.0, "facultative_respiration": 0.0, "anaerobic_respiration": 1.0, "aerobic_respiration": 0.0, "mesophilic_range_tmp": 1.0, "thermophilic_range_tmp": 0.0, "psychrophilic_range_tmp": 0.0, "bacillus_cell_shape": 0.0, "coccus_cell_shape": 1.0, "filament_cell_shape": 0.0, "coccobacillus_cell_shape": 0.0, "vibrio_cell_shape": 0.0, "spiral_cell_shape": 0.0 }, "_gtdb_taxon": [ "d__Bacteria", "p__Bacillota_A", "c__Clostridia", "o__Lachnospirales", "f__Lachnospiraceae", "g__Blautia", "s__Blautia coccoides" ], "_genome_taxon": [ "Blautia", "producta", "d__Bacteria", "p__Bacillota_A", "c__Clostridia", "o__Lachnospirales", "f__Lachnospiraceae", "g__Blautia", "s__Blautia coccoides", "Bacteria", "Bacillota", "A", "Clostridia", "Lachnospirales", "Lachnospiraceae", "Blautia", "Blautia", "coccoides" ], "_meo": [ { "id": "MEO_0000054", "label": "feces" } ], "quality": 3, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }