{
    "type": "genome",
    "identifier": "GCA_020718555.1",
    "organism": "Candidatus Babela sp.",
    "title": "Candidatus Babela sp.",
    "description": "derived from metagenome",
    "data type": "Genome sequencing and assembly",
    "organization": "University Duisburg-Essen",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCA_020718555.1",
        "bioproject": "PRJNA767587",
        "biosample": "SAMN22209611",
        "wgs_master": "DYRT00000000.1",
        "refseq_category": "na",
        "taxid": "2883558",
        "species_taxid": "2883558",
        "organism_name": "Candidatus Babela sp.",
        "infraspecific_name": "",
        "isolate": "SulCav_GS10_10_24_22",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2021/11/02",
        "asm_name": "ASM2071855v1",
        "submitter": "University Duisburg-Essen",
        "gbrs_paired_asm": "na",
        "paired_asm_comp": "na",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/020/718/555/GCA_020718555.1_ASM2071855v1",
        "excluded_from_refseq": "derived from metagenome",
        "relation_to_type_material": "",
        "asm_not_live_date": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2021-11-02",
    "dateModified": "2021-11-02",
    "datePublished": "2021-11-02",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Candidatus Babela sp."
        ],
        "sample_taxid": [
            "2883558"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Italy: Frasassi cave"
        ],
        "sample_host_location_id": [],
        "data_size": "1.697 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 91.29,
        "contamination": 3.16,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "MAG",
    "data_source": "INSDC",
    "_dfast": {
        "Total Sequence Length (bp)": "6304591",
        "Number of Sequences": "719",
        "Longest Sequences (bp)": "490719",
        "N50 (bp)": "8159",
        "Gap Ratio (%)": "0.417156",
        "GCcontent (%)": "23.8",
        "Number of CDSs": "2174",
        "Average Protein Length": "206.9",
        "Coding Ratio (%)": "21.4",
        "Number of rRNAs": "0",
        "Number of tRNAs": "65",
        "Number of CRISPRs": "2"
    },
    "has_analysis": true,
    "_dfastqc": {
        "tc_result": [
            {
                "organism_name": "Urechidicola croceus",
                "strain": "strain=LPB0138",
                "accession": "GCA_001761325.1",
                "taxid": 1850246,
                "species_taxid": 1850246,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.635,
                "matched_fragments": 77,
                "total_fragments": 1682,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Clostridium zeae",
                "strain": "strain=CSC2",
                "accession": "GCA_017312485.1",
                "taxid": 2759022,
                "species_taxid": 2759022,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.6318,
                "matched_fragments": 115,
                "total_fragments": 1682,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Flavobacterium aquariorum",
                "strain": "strain=IMCC34762",
                "accession": "GCA_003254745.1",
                "taxid": 2217670,
                "species_taxid": 2217670,
                "relation_to_type": "type",
                "validated": true,
                "ani": 74.6282,
                "matched_fragments": 63,
                "total_fragments": 1682,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Borrelia hispanica",
                "strain": "strain=CRI",
                "accession": "GCA_000500065.1",
                "taxid": 40835,
                "species_taxid": 40835,
                "relation_to_type": "reftype",
                "validated": true,
                "ani": 74.6081,
                "matched_fragments": 61,
                "total_fragments": 1682,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 91.29,
            "contamination": 3.16,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_012568245.1",
                "gtdb_species": "s__GCA-012562765 sp012568245",
                "ani": 75.034,
                "matched_fragments": 108,
                "total_fragments": 1682,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales_A;f__Enterobacteriaceae_A;g__GCA-012562765",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCA_900543825.1",
                "gtdb_species": "s__CAG-302 sp900543825",
                "ani": 74.7992,
                "matched_fragments": 64,
                "total_fragments": 1682,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__RF39;f__UBA660;g__CAG-302",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.18",
                "min_intra_species_ani": "98.11",
                "mean_intra_species_af": "0.88",
                "min_intra_species_af": "0.87",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_900548425.1",
                "gtdb_species": "s__CAG-302 sp900548425",
                "ani": 74.7144,
                "matched_fragments": 64,
                "total_fragments": 1682,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__RF39;f__UBA660;g__CAG-302",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.47",
                "min_intra_species_ani": "98.99",
                "mean_intra_species_af": "0.91",
                "min_intra_species_af": "0.87",
                "num_clustered_genomes": 3,
                "status": "-"
            },
            {
                "accession": "GCA_002689995.1",
                "gtdb_species": "s__GCA-2689995 sp002689995",
                "ani": 74.7068,
                "matched_fragments": 130,
                "total_fragments": 1682,
                "gtdb_taxonomy": "d__Bacteria;p__Marinisomatota;c__Marinisomatia;o__SCGC-AAA003-L08;f__GCA-2689995;g__GCA-2689995",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_001761325.1",
                "gtdb_species": "s__Urechidicola croceus",
                "ani": 74.635,
                "matched_fragments": 77,
                "total_fragments": 1682,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Urechidicola",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_003254745.1",
                "gtdb_species": "s__Flavobacterium aquariorum",
                "ani": 74.6282,
                "matched_fragments": 63,
                "total_fragments": 1682,
                "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_017312485.1",
                "gtdb_species": "s__Clostridium_AR sp017312485",
                "ani": 74.6186,
                "matched_fragments": 117,
                "total_fragments": 1682,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Clostridiales;f__Clostridiaceae;g__Clostridium_AR",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_000019705.1",
                "gtdb_species": "s__Borrelia recurrentis",
                "ani": 74.5352,
                "matched_fragments": 54,
                "total_fragments": 1682,
                "gtdb_taxonomy": "d__Bacteria;p__Spirochaetota;c__Spirochaetia;o__Borreliales;f__Borreliaceae;g__Borrelia",
                "ani_circumscription_radius": 95.1965,
                "mean_intra_species_ani": "98.05",
                "min_intra_species_ani": "97.41",
                "mean_intra_species_af": "0.94",
                "min_intra_species_af": "0.91",
                "num_clustered_genomes": 6,
                "status": "-"
            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": null,
        "cell_length": null,
        "doubling_h": null,
        "growth_tmp": null,
        "optimum_tmp": null,
        "optimum_ph": null,
        "genome_size": null,
        "gc_content": null,
        "coding_genes": null,
        "rRNA16S_genes": null,
        "tRNA_genes": null,
        "gram_stain": null,
        "sporulation": null,
        "motility": null,
        "range_salinity": null,
        "facultative_respiration": null,
        "anaerobic_respiration": null,
        "aerobic_respiration": null,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": null,
        "coccus_cell_shape": null,
        "filament_cell_shape": null,
        "coccobacillus_cell_shape": null,
        "vibrio_cell_shape": null,
        "spiral_cell_shape": null
    },
    "_gtdb_taxon": [
        "d__Bacteria",
        "p__Dependentiae",
        "c__Babeliae",
        "o__Babeliales",
        "f__Babeliaceae",
        "g__",
        "s__"
    ],
    "_genome_taxon": [
        "Candidatus",
        "Babela",
        "sp.",
        "d__Bacteria",
        "p__Dependentiae",
        "c__Babeliae",
        "o__Babeliales",
        "f__Babeliaceae",
        "g__",
        "s__",
        "Bacteria",
        "Dependentiae",
        "Babeliae",
        "Babeliales",
        "Babeliaceae",
        "g",
        "",
        "",
        "s",
        "",
        ""
    ],
    "_meo": [
        {
            "id": "MEO_0000366",
            "label": "ground water"
        },
        {
            "id": "MEO_0000116",
            "label": "biofilm"
        }
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}